Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coboldia_20fuscipes_20[genbank_20GCA_5F001014335.1_202015-05-28] 1,732 sequences; 98,759,061 total letters Query= NC_028099.1 Length=122522 Score E Sequences producing significant alignments: (Bits) Value seq1606 89.7 4e-13 >seq1606 Length=54755 Score = 89.7 bits (98), Expect = 4e-13 Identities = 225/336 (67%), Gaps = 11/336 (3%) Strand=Plus/Plus Query 111787 TGTGCAATCATGTATGTGAGTAGACTG--TAACTAGCAATGTTAAATGGCACACCTAGGC 111844 ||||||||||||||||| | ||| || ||||| || | |||||||| ||||| || | Sbjct 16907 TGTGCAATCATGTATGTTA--AGAGTGCATAACTGGCGACATTAAATGGTACACCAAGTC 16964 Query 111845 CCATATCTCCCGATCTTTGATATAGCTGACATGATAGTTTATTTTGTGACACATAAAATT 111904 ||||||| | || ||||| || || ||||| |||| || | | | ||| | |||| Sbjct 16965 CCATATCAGCTGACCTTTGGTAAAGTTGACACGATAATTCACCGTTAGCTACAAAGAATT 17024 Query 111905 GACAAAGTACATGACAAGGAGGCAATGCCA----TCCCATTCATAAAGGGTCCCCATGCA 111960 | ||| ||| ||||| |||||||||| | ||| || || | ||||||| Sbjct 17025 GTACAAGACAATGGCAAGGCGGCAATGCCATTTGTGGTATTTGTATTGGAT-TCCATGCA 17083 Query 111961 CACATGATCATCCTTC-TGCTGTAGCGATTATGTTCAATGTCGTGTATGACATTCAAGAG 112019 ||||||| || | | | || | |||| | || ||| | | ||| || | || Sbjct 17084 GACATGATAATACGACGATCAGTTG-GATTTTCTTTAATCTTTTTTATCACTTCGGCTAG 17142 Query 112020 CTGGTCTATCCCTTTACCAGTATAATCCGCCTGACATCCAGTGTATGTTGCCCCATAGTG 112079 || || | ||| | ||| | ||||| | ||||| | | || || ||| | || Sbjct 17143 TTGATCAACCCCATGACCTGAGTAATCAGTATGACAATTATTATAGTCGGCGCCAAAATG 17202 Query 112080 TCTCCATTGGAATCCATAAATAGGCCCCAGATCTCC 112115 ||||||||| || || |||| || |||| ||| || Sbjct 17203 TCTCCATTGAAAACCGTAAACGGGACCCAAATCACC 17238 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 391937326518316