Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Coboldia_20fuscipes_20[genbank_20GCA_5F001014335.1_202015-05-28]
1,732 sequences; 98,759,061 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq1282 136 2e-27
seq1524 116 2e-21
seq981 105 4e-18
seq314 105 4e-18
seq599 91.5 9e-14
>seq1282
Length=29674
Score = 136 bits (150), Expect = 2e-27
Identities = 169/229 (74%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538
||||||||| | ||| | ||||||||||| || ||||| || || |||||||| ||
Sbjct 28564 GCCGCCTCTCAAACGAAGGACCAAATGGAGTGTAGATTCCTTCTGGATATTATAATCCGA 28623
Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598
| ||| || | || |||||||||||||| ||||| |||||||| ||||| || || ||
Sbjct 28624 TAATGTGCGTCCATCCTCAAGTTGTTTACCAGCAAAAATTAAACGTTGTTGATCTGGAGG 28683
Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACG-ATAAAATTGTGTCTTCGCTCTCCA 34657
| || |||||||| |||| || | ||||||| | ||| || ||| ||| |
Sbjct 28684 AATGCCTTCCTTGTCCTGGATC-TTGGCTTTAACGTTTTCAATGGTATCTGATGGCTCGA 28742
Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|||||| || || || ||||| || || ||||| || || ||||||||
Sbjct 28743 CTTCCAAAGTAATGGTCTTACCAGTCAAGGTTTTGACGAAGATCTGCAT 28791
Score = 120 bits (132), Expect = 2e-22
Identities = 165/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| || | ||||||||| || ||||||||||| ||||||||| ||||| || || ||
Sbjct 29021 CCACCGCGAAGACGCAATACTAAATGGAGAGTAGACTCCTTTTGGATGTTGTAGTCAGAC 29080
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
| ||| || | ||||||||||| || || ||||| |||||||| || || || || ||
Sbjct 29081 AATGTACGTCCATCTTCAAGTTGCTTGCCAGCAAAGATTAAACGTTGCTGATCTGGGGGA 29140
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACG-ATAAAATTGTGTCTTCGCTCTCCAC 34658
| || ||||||||| |||| || | |||||| | ||| || || || ||
Sbjct 29141 ATACCTTCCTTGTCTTGGATC-TTGGCCTTAACGTTTTCAATGGTATCAGAAGGTTCAAC 29199
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
||| | || || ||||| || || || ||||| || ||||| |||||
Sbjct 29200 TTCTAAAGTAATGGTTTTTCCAGTCAAAGTTTTGACGAAAATTTGCAT 29247
Score = 120 bits (132), Expect = 2e-22
Identities = 165/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| || | ||||||||| || ||||||||||| ||||||||| ||||| || || ||
Sbjct 29249 CCACCGCGAAGACGCAATACTAAATGGAGAGTAGACTCCTTTTGGATGTTGTAGTCAGAC 29308
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
| ||| || | ||||||||||| || || ||||| |||||||| || || || || ||
Sbjct 29309 AATGTACGTCCATCTTCAAGTTGCTTGCCAGCAAAGATTAAACGTTGCTGATCTGGGGGA 29368
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACG-ATAAAATTGTGTCTTCGCTCTCCAC 34658
| || ||||||||| |||| || | |||||| | ||| || || || ||
Sbjct 29369 ATACCTTCCTTGTCTTGGATC-TTGGCCTTAACGTTTTCAATGGTATCAGAAGGTTCAAC 29427
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
||| | || || ||||| || || || ||||| || ||||| |||||
Sbjct 29428 TTCTAAAGTAATGGTTTTTCCAGTCAAAGTTTTGACGAAAATTTGCAT 29475
Score = 100 bits (110), Expect = 2e-16
Identities = 155/219 (71%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
||||| || || ||||| ||||| || ||||| ||||| || || || | ||| ||
Sbjct 28802 AGACGTAATACTAAATGCAGAGTCGATTCTTTTTGGATGTTGTAGTCAGATAATGTACGA 28861
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
| ||||||||||||||||| ||||| || ||||| || || || || || | || |||
Sbjct 28862 CCATCTTCAAGTTGTTTACCAGCAAAAATCAAACGTTGCTGATCTGGTGGAATACCTTCC 28921
Query 34609 TTGTCTGTGATCTTTTGTTTTAAC-GATAAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667
|||||| |||| || | ||||| | ||| || || || ||||| | ||
Sbjct 28922 TTGTCTTGGATC-TTGGCCTTAACATTTTCAATGGTATCAGAAGGTTCTACTTCTAAAGT 28980
Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|| ||||| || || || ||||| || ||||| |||||
Sbjct 28981 AATGGTTTTTCCAGTCAAAGTTTTGACGAAAATTTGCAT 29019
>seq1524
Length=218836
Score = 116 bits (128), Expect = 2e-21
Identities = 164/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| || | ||||||||| || || || ||||| |||||| || ||||| ||||| ||
Sbjct 78 CCACCACGAAGACGCAATACTAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAATCGGAC 137
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
| ||| || | ||||||||||| ||||| || || || |||||||| || || || ||
Sbjct 138 AATGTACGTCCATCTTCAAGTTGCTTACCAGCGAAAATCAAACGCTGCTGATCTGGAGGA 197
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACG-ATAAAATTGTGTCTTCGCTCTCCAC 34658
| || ||||||||| |||| || | |||||| | ||| || || || ||
Sbjct 198 ATACCTTCCTTGTCTTGGATC-TTGGCCTTAACGTTTTCAATGGTATCAGAAGGTTCTAC 256
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
||| | || || |||||||| || || ||||| ||||| || |||||
Sbjct 257 TTCTAAAGTAATGGTTTTACCAGTCAAAGTTTTGACAAATATTTGCAT 304
>seq981
Length=59034
Score = 105 bits (116), Expect = 4e-18
Identities = 161/227 (71%), Gaps = 2/227 (1%)
Strand=Plus/Minus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
|||||||||||||| || || || |||||| || || || || || || | || ||
Sbjct 46928 AGACGCAACACCAAGTGAAGGGTTGACTCCTTCTGGATATTGTAGTCGGACAACGTACGG 46869
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
| ||||| | ||| ||||| || || || ||||| ||||| || || || | |||||
Sbjct 46868 CCATCTTCCAATTGCTTACCAGCGAAGATCAAACGTTGTTGATCTGGTGGAATGCCCTCT 46809
Query 34609 TTGTCTGTGATCTTTTGTTTTAAC-GATAAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667
|| ||| ||| ||| | ||| || | ||||| ||| ||||| || | |||
Sbjct 46808 TTATCTTGGAT-TTTGGCTTTCACATTTTCGATTGTATCTGATGGTTCCACCTCTAGGGT 46750
Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTGATTG 34714
|| |||||||| || || |||||||| || |||||||| |||| ||
Sbjct 46749 GATGGTTTTACCAGTCAATGTTTTCACGAAGATCTGCATCTTGAGTG 46703
>seq314
Length=315434
Score = 105 bits (116), Expect = 4e-18
Identities = 162/231 (70%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| || | ||| |||||||||||||| || || |||||||| ||||| || |||||
Sbjct 276262 CCACCACGAAGTCGCAACACCAAATGAAGGGTAGATTCCTTTTGGATGTTGTAGTCTGAT 276203
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
| || || | ||||| | ||||||||||||||| || ||||| ||||| || || ||
Sbjct 276202 AAGGTGCGACCATCTTCCAATTGTTTACCGGCAAAGATCAAACGTTGTTGATCTGGTGGA 276143
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAAATTGTGTCTTCGCTCTCCACT 34659
| || || || ||| ||||| |||| | || || || || |||
Sbjct 276142 ATGCCTTCTTTATCTTGAATCTTGGCCTTTACATTTTCGATAGTATCGGATGGTTCAACT 276083
Query 34660 TCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTG 34710
|| | ||| || |||||||| || | || |||||||| ||||||||| ||
Sbjct 276082 TCGAGGGTAATGGTTTTACCCGTAAGAGTCTTCACAAAGATCTGCATGATG 276032
>seq599
Length=5473
Score = 91.5 bits (100), Expect = 9e-14
Identities = 88/113 (78%), Gaps = 0/113 (0%)
Strand=Plus/Minus
Query 34476 GTCGCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATC 34535
|| ||| || | |||||| |||||||| ||||| || ||||||||||||||||||||
Sbjct 113 GTTGCCACCACGAAGACGTAACACCAAGTGGAGGGTAGATTCCTTTTGAATGTTATAATC 54
Query 34536 TGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTT 34588
|| | ||| || | || || | ||||||||| || || |||||||| ||||
Sbjct 53 GGACAATGTACGACCATCCTCTAATTGTTTACCAGCGAAGATTAAACGTTGTT 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 314722956451556
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |