Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Coboldia_20fuscipes_20[genbank_20GCA_5F001014335.1_202015-05-28]
1,732 sequences; 98,759,061 total letters
Query= NC_028853.1
Length=50078
Score E
Sequences producing significant alignments: (Bits) Value
seq124 531 2e-146
>seq124
Length=1616
Score = 531 bits (588), Expect = 2e-146
Identities = 853/1211 (70%), Gaps = 26/1211 (2%)
Strand=Plus/Plus
Query 38601 TGTAGAAGATCAAACCTAATCTGACAGTCCCCCGTTTTAAATTACCGTGTCTGTCAGATT 38660
|||| || |||||||| |||||||||| || | || ||| | ||||||| ||
Sbjct 402 TGTACTAGCTCAAACCTGATCTGACAGTTACCGATATTTGCTTAA---GACTGTCAGGTT 458
Query 38661 AA-TTTGAGCTTAAATTCTTTTCCACCCAAATCCGTTTTCCATCAAGTAAGGTTGCCATC 38719
|| |||||||| ||||||||||| ||||||| ||||||||||||||||| ||||| |
Sbjct 459 AAATTTGAGCT-AAATTCTTTTCAGCCCAAATACGTTTTCCATCAAGTAATGTTGCAAAT 517
Query 38720 GGTGTTCTGCCACAGCACATTTTTCCTTGATGTGTTCGATGGTGATTATAATACATTAAC 38779
|||||||||||| ||| | || || ||||| ||||| | |||||| | ||| |
Sbjct 518 GGTGTTCTGCCATTGCATACCTTGCCCTGATGGGTTCGTTCAGTATTATAGAATTTTAGC 577
Query 38780 CACTCATCTAAATCCGCTTGTAATGTCGTTAAATCCG-TATAAATTTTCTTCCTAAATGC 38838
|| | |||| ||| ||||| || | ||| | |||||| |||||||| || |
Sbjct 578 CAACCGTCTAGATCAAACTGTAAC-TCTTCTAATGAGCTATAAAGTTTCTTCCGGAAAGT 636
Query 38839 CACTTGGTAAAATTCTTGTAAGATTGTTTTATGGAACCGTTCGCAGATACCATTCGTCTG 38898
| || ||||| || || ||||| || |||||||| || |||||||| ||||| || ||
Sbjct 637 AATCTGATAAAACTCCTGCAAGATCGTCTTATGGAAGCGCTCGCAGATCCCATTAGTTTG 696
Query 38899 GGG--ATGCTTCACTTTCGTTTTCGTATGCTCTATGTCATTTATCGCTAAATAAAGCTCA 38956
|| | ||| | ||||||||| || || || || ||||| | ||||||||||||||||
Sbjct 697 TGGTGAGGCTGC--TTTCGTTTTAGTGTGGTCAATATCATTCAGCGCTAAATAAAGCTCA 754
Query 38957 TAATCGTGATTTTCTACCTTGCCACAATATTCACTTCCTCGGTCAGTTAATATGCGTAAC 39016
||||| |||| ||| || || || |||||||| | || | |||||| | ||||| | |
Sbjct 755 TAATCATGATGTTCAACTTTACCGCAATATTCTGTACCCCTGTCAGTCAGAATGCGAAGC 814
Query 39017 ATCGGTAAACCTTGGCTTTCAAAGTATGGTAACACTTTATCATTCAGCATATCCGCAGCA 39076
|| ||||| |||||| ||| || |||| |||||| ||||||| | ||| || ||
Sbjct 815 ATTGGTAATCCTTGGGACTCATAGAATGGCAACACTCGGTCATTCAATAAATCTGCGGCT 874
Query 39077 CTGATAGCGGTCTTCATTGTATAAAGTTTT--GCAAACGCCACTTTACTGTAAGTATCAA 39134
|||| | ||||| |||| || || || | ||| |||||| || || |||||||
Sbjct 875 GTGATTGGCGTCTTGGTTGTGTATAGCTTACAGTGAAC--CACTTTGCTATAGGTATCAA 932
Query 39135 TAAACGTTTGTTGATAAATACGACCCACTCCTTTGAGGTTGCCCACATAGAAAGTATCTT 39194
|||| ||||| |||||||||||||| || ||||| || || || ||||| ||||||||||
Sbjct 933 TAAAAGTTTGCTGATAAATACGACCAACGCCTTTTAGATTTCCAACATAAAAAGTATCTT 992
Query 39195 GTGAGCCAAGATAGCCAGGGTGTACCGTTTCAATTTCACCACAGGCAATCTCATCTTCTT 39254
||| ||||| || || | || |||||||||||||||||| |||| |||||||| |
Sbjct 993 GTGCTCCAAGGTATCCTAGATGATGCGTTTCAATTTCACCACAAGCAACATCATCTTCAT 1052
Query 39255 TCTTACGCTCTAAGGCTTGTACCTGTGTTTCACTGAGTATAATACCTTGTTCTGCAACCA 39314
||||| ||||| || | ||| ||| | | |||||||| || |||||
Sbjct 1053 GTTTACGTTCTAATGCAGCAATCTGCTGATCATTCAACTGAATACCTTCTTGAGCAACTT 1112
Query 39315 GTTTTTCCAGGGCGATTAATCTTTGCTTAAAATTGGCAAGATGATGACGTAACCAAATCG 39374
|||| || || |||||| | || ||||| |||||| || | | ||| || |
Sbjct 1113 TCATTTCAAGTGCCTTTAATCGCTTTTTGAAATTCTCAAGATTGTGTCTAAGCCAGATAG 1172
Query 39375 AACGTACACCTCCTGCTGAAACAAAGATGCCTTGTTTACGGAGTTCCTTACTCACTCTTA 39434
|||||||||| | | | || |||||||| || | ||| || || ||||| ||
Sbjct 1173 AACGTACACCGCTTCCAGATACAAAGATACCAATCTGACGTAGCTCATTACTGGTCCTAT 1232
Query 39435 CCTGTCCAAATGCCGGGTTATCAAGAGCAAACTTCACAACAGCTTGCTCTATTGCCTCAT 39494
||| ||| | || || | | | ||||| | ||||||||||| || || |||||
Sbjct 1233 GCTGACCATAAGCTGGATATTGGATTGCAAAATCAACAACAGCTTGTTCAGTTTGCTCAT 1292
Query 39495 CAACACGATTTTTTAAGTTGGGAACGCGTCTATTTTGATTCAGCAATGCTTCAACACCAC 39554
| || || |||||||| || ||| | | | |||| || | | ||| || | | |
Sbjct 1293 CCACTCGGTTTTTTAAATTTGGAGTTCTGCGACTTTGGTTGATGAGTGCATCCATATTGC 1352
Query 39555 C-TTGCT--CAACCGCTTGTTGATAACGATAGAATGTATCTCGGCTCATTCCCATTACTT 39611
| | || ||| || |||||| |||||||| ||||||| | ||||| ||||
Sbjct 1353 CAGTACTGGCAA---GTTCTTGATAGCGATAGAAGGTATCTCTAGATACACCCATGACTT 1409
Query 39612 TGCAGGCTTGAGAAATATTACCCAGTTCTTCTGCTAAATTTAATAAACCGGTCTTGTGTT 39671
| || |||| || | || ||||||||||||||||| | | ||| |||||||
Sbjct 1410 TACAAGCTTTGGATACGTTCTGGAGTTCTTCTGCTAAATTCAGCAGACCTACTTTGTGTT 1469
Query 39672 TAATGAGAGGGTTGTTAGAATAAAACATGAG-AGTTTCCTTTTTGTTTAGATTGATTTTT 39730
| |||| | ||||||| || |||||||| |||| |||| | | |||||| ||
Sbjct 1470 TGATGATTTGATTGTTAGTATGCAACATGAGAAGTTACCTT----TATTGATTGAGATTC 1525
Query 39731 GACACTCATATTCTAAACGGGAAACTCTCACTTTTTAGAGTGAATTGTCAGATCAAGTCT 39790
||||| || || ||| || |||| |||||| || |||||||||||||||
Sbjct 1526 GACACCTTTAATCAAAATCGGTAACTTCTTCTTTTTCAAGCTCTGTGTCAGATCAAGTCT 1585
Query 39791 GATCTTCTACA 39801
|| || ||||
Sbjct 1586 GAACTAATACA 1596
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 160124706567360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |