Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Coboldia_20fuscipes_20[genbank_20GCA_5F001014335.1_202015-05-28]
1,732 sequences; 98,759,061 total letters
Query= NC_028995.1
Length=43216
Score E
Sequences producing significant alignments: (Bits) Value
seq1240 147 6e-31
>seq1240
Length=38001
Score = 147 bits (162), Expect = 6e-31
Identities = 162/216 (75%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 9032 GATATGAAGTTAACTGAATTTTTAGAAAAAATTGGAAATGAAAACTTGAAAATTCAAGTT 9091
|| |||| ||||| |||||||||| |||||| || ||||| || | ||||| ||
Sbjct 8051 GAGATGACATTAACGGAATTTTTAGGAAAAATAGGCAATGAGAATCTAGCTATTCAGATT 8110
Query 9092 TTGCACAATTCAATTGTTTCCGAGAGaaaaacaaaaaaCGATATAGAAATTACATTTGCA 9151
|| || | || || | ||||||| |||||| ||| | ||||| ||| | || ||||||
Sbjct 8111 TTACATGACTCTGTTATCTCCGAGAAAAAAACCAAAGAAGATATTGAAGTGACTTTTGCA 8170
Query 9152 ACAGAAAATGGTAATTCTCAAATTTTAAGTAAAAGTAATCGTGTTGGTATTGTGGTTTGG 9211
|||||| || ||||| | || | ||| || || ||||| ||||||||||||
Sbjct 8171 ACAGAATCCAAAAACACTCAACTATTGGGAAAATCAAAACGAGTTGGCATTGTGGTTTGG 8230
Query 9212 ATGGATGCTGAGAAATACAATGAGGCTATAAAATGA 9247
||||||||||| || ||||| |||||||||||||||
Sbjct 8231 ATGGATGCTGATAAGTACAACGAGGCTATAAAATGA 8266
Score = 102 bits (112), Expect = 2e-17
Identities = 137/191 (72%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 37759 ATGAAAATGACAAAAGGTGGCTTTGATATATTACGCAAAGCCTTTGGCTCACTTACTCAG 37818
||||| |||||| |||||| ||| ||||| | || || || || | | | ||
Sbjct 29414 ATGAAGATGACAGCAGGTGGATTTAATATACTGCGTAATAATTTAGGTCGATTAAACCAA 29473
Query 37819 ACACAAGTGAACGCTATTAATTTCTTAATTGATGAGTTTGACAAAGACAAATCAATCAGC 37878
| ||||| | |||||||| ||| | |||||| || ||||| ||||| ||
Sbjct 29474 AGCCAAGTTGATCAGATTAATTTTTTAGTATCTGAGTTCGATAAAGATAAATCCATTTCA 29533
Query 37879 TACCCACAAGCATCCTACATGCTTGCTACTACATGGCACGAAACAGCGCGCACGATGCTA 37938
|| ||||||||| |||||||||||||||| |||||||| ||||| ||| || |||||
Sbjct 29534 TATCCACAAGCAGCCTACATGCTTGCTACCACATGGCATGAAACTGCGACAACCATGCTG 29593
Query 37939 CCTATCAAGGA 37949
||||| ||||
Sbjct 29594 CCTATTGAGGA 29604
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 138166758196752
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |