Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Coboldia_20fuscipes_20[genbank_20GCA_5F001014335.1_202015-05-28]
1,732 sequences; 98,759,061 total letters
Query= NC_029304.1
Length=111246
Score E
Sequences producing significant alignments: (Bits) Value
seq314 96.9 2e-15
seq1282 93.3 3e-14
seq1524 84.2 2e-11
>seq314
Length=315434
Score = 96.9 bits (106), Expect = 2e-15
Identities = 160/229 (70%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849
||||| || |||||||| |||||||| || ||| ||||| | || || ||| ||
Sbjct 276036 ATGCAGATCTTTGTGAAGACTCTTACGGGTAAAACCATTACCCTCGAAGTTGAACCATCC 276095
Query 27850 GA--CGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907
|| | || | ||| || || || || || |||||||| |||| || |
Sbjct 276096 GATACTATCGAAAAT--GTAAAGGCCAAGATTCAAGATAAAGAAGGCATTCCACCAGATC 276153
Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967
| ||||| || || |||||||| ||||||||||| || | |||| ||| || || ||||
Sbjct 276154 AACAACGTTTGATCTTTGCCGGTAAACAATTGGAAGATGGTCGCACCTTATCAGACTACA 276213
Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016
|||||||||| || || | |||||||| ||||| | ||||| ||
Sbjct 276214 ACATCCAAAAGGAATCTACCCTTCATTTGGTGTTGCGACTTCGTGGTGG 276262
>seq1282
Length=29674
Score = 93.3 bits (102), Expect = 3e-14
Identities = 159/229 (69%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849
||||||||||| || |||||| | ||||| ||| ||||| | || || ||| |
Sbjct 29019 ATGCAAATTTTCGTCAAAACTTTGACTGGAAAAACCATTACTTTAGAAGTAGAACCTTCT 28960
Query 27850 GA--CGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907
|| | || | ||| || || || || ||||| |||||| |||| || |
Sbjct 28959 GATACCATTGAAAAT--GTTAAGGCCAAGATCCAAGACAAGGAAGGTATTCCACCAGATC 28902
Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967
||||||| || |||||||| || |||||| | || || | || | || || || ||||
Sbjct 28901 AGCAACGTTTGATTTTTGCTGGTAAACAACTTGAAGATGGTCGTACATTATCTGACTACA 28842
Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016
||||||||||||| ||| ||||||| || || ||| | ||||| ||
Sbjct 28841 ACATCCAAAAAGAATCGACTCTGCATTTAGTATTACGTCTACGTGGAGG 28793
Score = 89.7 bits (98), Expect = 4e-13
Identities = 100/134 (75%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 27883 GACAAAGAAGGTGTTCCGATGGAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGAC 27942
||||| |||||| |||| || |||||||| ||||| ||||| || || ||| | ||
Sbjct 29154 GACAAGGAAGGTATTCCCCCAGATCAGCAACGTTTAATCTTTGCTGGCAAGCAACTTGAA 29095
Query 27943 GACGAACGCAGCTTGTCCGATTACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTG 28002
|| | ||| | ||||| || |||||||||||||| ||| ||| | ||||| || |||
Sbjct 29094 GATGGACGTACATTGTCTGACTACAACATCCAAAAGGAGTCTACTCTCCATTTAGTATTG 29035
Query 28003 CGTTTGCGTGGCGG 28016
||| | || || ||
Sbjct 29034 CGTCTTCGCGGTGG 29021
Score = 89.7 bits (98), Expect = 4e-13
Identities = 100/134 (75%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 27883 GACAAAGAAGGTGTTCCGATGGAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGAC 27942
||||| |||||| |||| || |||||||| ||||| ||||| || || ||| | ||
Sbjct 29382 GACAAGGAAGGTATTCCCCCAGATCAGCAACGTTTAATCTTTGCTGGCAAGCAACTTGAA 29323
Query 27943 GACGAACGCAGCTTGTCCGATTACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTG 28002
|| | ||| | ||||| || |||||||||||||| ||| ||| | ||||| || |||
Sbjct 29322 GATGGACGTACATTGTCTGACTACAACATCCAAAAGGAGTCTACTCTCCATTTAGTATTG 29263
Query 28003 CGTTTGCGTGGCGG 28016
||| | || || ||
Sbjct 29262 CGTCTTCGCGGTGG 29249
>seq1524
Length=218836
Score = 84.2 bits (92), Expect = 2e-11
Identities = 99/134 (74%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 27883 GACAAAGAAGGTGTTCCGATGGAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGAC 27942
||||| |||||| |||| || ||||| || || ||||| || || || ||| | ||
Sbjct 211 GACAAGGAAGGTATTCCTCCAGATCAGCAGCGTTTGATTTTCGCTGGTAAGCAACTTGAA 152
Query 27943 GACGAACGCAGCTTGTCCGATTACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTG 28002
|| | ||| | |||||||||||||||||||| || ||| ||| | || || || |||
Sbjct 151 GATGGACGTACATTGTCCGATTACAACATCCAGAAGGAGTCTACTCTTCACTTAGTATTG 92
Query 28003 CGTTTGCGTGGCGG 28016
||| | ||||| ||
Sbjct 91 CGTCTTCGTGGTGG 78
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 355854888189564
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |