Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Coboldia_20fuscipes_20[genbank_20GCA_5F001014335.1_202015-05-28]
1,732 sequences; 98,759,061 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq1282 156 1e-32
seq1524 152 1e-31
seq981 143 6e-29
seq1657 84.2 5e-11
>seq1282
Length=29674
Score = 156 bits (172), Expect = 1e-32
Identities = 167/221 (76%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552
||||| | || || | |||||||| || || ||||||| ||||| || | ||| ||
Sbjct 29027 CGAAGACGCAATACTAAATGGAGAGTAGACTCCTTTTGGATGTTGTAGTCAGACAATGTA 29086
Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612
| |||||||| || ||||| ||||| ||||| | ||||| || || || |||||||||
Sbjct 29087 CGTCCATCTTCAAGTTGCTTGCCAGCAAAGATTAAACGTTGCTGATCTGGGGGAATACCT 29146
Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672
||||||||||||||||| ||| || ||| ||||| || || | ||| || |||||
Sbjct 29147 TCCTTGTCTTGGATCTTGGCCTTAACGTTTTCAATGGTATCAGAAGGTTCAACTTCTAAA 29206
Query 225673 GTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|| || || || || ||||||||||| | ||| | ||||||
Sbjct 29207 GTAATGGTTTTTCCAGTCAAAGTTTTGACGAAAATTTGCAT 29247
Score = 156 bits (172), Expect = 1e-32
Identities = 167/221 (76%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552
||||| | || || | |||||||| || || ||||||| ||||| || | ||| ||
Sbjct 29255 CGAAGACGCAATACTAAATGGAGAGTAGACTCCTTTTGGATGTTGTAGTCAGACAATGTA 29314
Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612
| |||||||| || ||||| ||||| ||||| | ||||| || || || |||||||||
Sbjct 29315 CGTCCATCTTCAAGTTGCTTGCCAGCAAAGATTAAACGTTGCTGATCTGGGGGAATACCT 29374
Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672
||||||||||||||||| ||| || ||| ||||| || || | ||| || |||||
Sbjct 29375 TCCTTGTCTTGGATCTTGGCCTTAACGTTTTCAATGGTATCAGAAGGTTCAACTTCTAAA 29434
Query 225673 GTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|| || || || || ||||||||||| | ||| | ||||||
Sbjct 29435 GTAATGGTTTTTCCAGTCAAAGTTTTGACGAAAATTTGCAT 29475
Score = 150 bits (166), Expect = 4e-31
Identities = 155/203 (76%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 225511 TGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGC 225570
|| ||||| ||||||||||||| ||||| || | || || | |||||||| || ||
Sbjct 28817 TGCAGAGTCGATTCTTTTTGGATGTTGTAGTCAGATAATGTACGACCATCTTCAAGTTGT 28876
Query 225571 TTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTT 225630
|| ||||| || || | ||||| || || || ||||||||||||||||||||||||||
Sbjct 28877 TTACCAGCAAAAATCAAACGTTGCTGATCTGGTGGAATACCTTCCTTGTCTTGGATCTTG 28936
Query 225631 TGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTC 225690
||| ||| ||| ||||| || || | ||| || ||||| || || || || || |||
Sbjct 28937 GCCTTAACATTTTCAATGGTATCAGAAGGTTCTACTTCTAAAGTAATGGTTTTTCCAGTC 28996
Query 225691 AAAGTTTTTATGAACACTTGCAT 225713
|||||||| | ||| | ||||||
Sbjct 28997 AAAGTTTTGACGAAAATTTGCAT 29019
Score = 122 bits (134), Expect = 2e-22
Identities = 154/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
||||| | ||||| || ||||| || |||| ||| ||||| | || || | |||||
Sbjct 28580 AGGACCAAATGGAGTGTAGATTCCTTCTGGATATTATAATCCGATAATGTGCGTCCATCC 28639
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| || || || ||||| || || | |||||||| || || ||||| |||||||||||
Sbjct 28640 TCAAGTTGTTTACCAGCAAAAATTAAACGTTGTTGATCTGGAGGAATGCCTTCCTTGTCC 28699
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||||| || || ||| ||||| ||||| | || || || || || || |||
Sbjct 28700 TGGATCTTGGCTTTAACGTTTTCAATGGTATCTGATGGCTCGACTTCCAAAGTAATGGTC 28759
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|| || ||||| ||||| | ||| | |||||
Sbjct 28760 TTACCAGTCAAGGTTTTGACGAAGATCTGCAT 28791
>seq1524
Length=218836
Score = 152 bits (168), Expect = 1e-31
Identities = 167/222 (75%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
|||||| | || || | ||| ||||| || || || |||| |||||||||| ||| ||
Sbjct 83 ACGAAGACGCAATACTAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAATCGGACAATGT 142
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| |||||||| || ||||| |||||||| || | || || || || || ||||||||
Sbjct 143 ACGTCCATCTTCAAGTTGCTTACCAGCGAAAATCAAACGCTGCTGATCTGGAGGAATACC 202
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
|||||||||||||||||| ||| || ||| ||||| || || | ||| || |||||
Sbjct 203 TTCCTTGTCTTGGATCTTGGCCTTAACGTTTTCAATGGTATCAGAAGGTTCTACTTCTAA 262
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|| || || || || ||||||||||| | || | ||||||
Sbjct 263 AGTAATGGTTTTACCAGTCAAAGTTTTGACAAATATTTGCAT 304
>seq981
Length=59034
Score = 143 bits (158), Expect = 6e-29
Identities = 169/226 (75%), Gaps = 2/226 (1%)
Strand=Plus/Minus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
||| || | || || | ||| || || || || || |||| |||||| |||| ||| ||
Sbjct 46932 ACGGAGACGCAACACCAAGTGAAGGGTTGACTCCTTCTGGATATTGTAGTCGGACAACGT 46873
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| |||||||| | ||||| ||||||||||| | |||||||| || || ||||| ||
Sbjct 46872 ACGGCCATCTTCCAATTGCTTACCAGCGAAGATCAAACGTTGTTGATCTGGTGGAATGCC 46813
Query 225612 TTCCTTGTCTTGGATCTTTTGC-TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTA 225670
|| || |||||||| ||| || |||||| |||||| || ||||| | |||||| ||||
Sbjct 46812 CTCTTTATCTTGGAT-TTTGGCTTTCACATTTTCGATTGTATCTGATGGTTCCACCTCTA 46754
Query 225671 ACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716
||||| || || || ||||| ||||| | ||| | ||||| ||
Sbjct 46753 GGGTGATGGTTTTACCAGTCAATGTTTTCACGAAGATCTGCATCTT 46708
>seq1657
Length=82118
Score = 84.2 bits (92), Expect = 5e-11
Identities = 100/132 (76%), Gaps = 3/132 (2%)
Strand=Plus/Minus
Query 225589 CGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGC-TTCACAGCTTCGAT 225647
||||||||||| || || || |||||||| |||||||| ||| || |||||| ||| ||
Sbjct 82113 CGTTGTTGGTCTGGTGGGATTCCTTCCTTATCTTGGAT-TTTGGCTTTCACATTTTCAAT 82055
Query 225648 GGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACAC 225707
|| || || | || || || | ||||| || ||||| ||||| ||||| | ||| |
Sbjct 82054 CGTATCGGATGGCTCAACCTCCAGGGTGATAGTTTTGCCAGTCAATGTTTTAACGAAGAT 81995
Query 225708 TTGCAT-TTTAT 225718
||||| |||||
Sbjct 81994 CTGCATCTTTAT 81983
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192504736242008
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |