Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coboldia_20fuscipes_20[genbank_20GCA_5F001014335.1_202015-05-28] 1,732 sequences; 98,759,061 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq314 178 3e-39 seq1282 168 1e-36 seq981 147 5e-30 seq1524 141 2e-28 seq1657 93.3 9e-14 >seq314 Length=315434 Score = 178 bits (196), Expect = 3e-39 Identities = 176/228 (77%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || || | |||| ||| | || ||| ||||||||||||||||| | Sbjct 276263 ACCACCACGAAGTCGCAACACCAAATGAAGGGTAGATTCCTTTTGGATGTTGTAGTCTGA 276204 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 | ||||| ||||| || | |||||| ||||||||||||||||||||||| || || Sbjct 276203 TAAGGTGCGACCATCTTCCAATTGTTTACCGGCAAAGATCAAACGTTGTTGATCTGGTGG 276144 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| || || || ||||| ||||| || ||||| | |||||||| || || | ||| || Sbjct 276143 AATGCCTTCTTTATCTTGAATCTTGGCCTTTACATTTTCGATAGTATCGGATGGTTCAAC 276084 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 |||||| || || || |||||||| | |||||| || || |||||||| Sbjct 276083 TTCGAGGGTAATGGTTTTACCCGTAAGAGTCTTCACAAAGATCTGCAT 276036 >seq1282 Length=29674 Score = 168 bits (186), Expect = 1e-36 Identities = 174/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||| ||||| || || | ||| | ||| | || ||||||||||||||||||||||| Sbjct 28792 ACCTCCACGTAGACGTAATACTAAATGCAGAGTCGATTCTTTTTGGATGTTGTAGTCAGA 28851 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 | || || ||||| || |||||||| || ||||| ||||||||||| || || || Sbjct 28852 TAATGTACGACCATCTTCAAGTTGTTTACCAGCAAAAATCAAACGTTGCTGATCTGGTGG 28911 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 |||||| ||||||||||||||||| || || || | || || || || |||| ||| || Sbjct 28912 AATACCTTCCTTGTCTTGGATCTTGGCCTTAACATTTTCAATGGTATCAGAAGGTTCTAC 28971 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||| | ||| || || || || |||||||| || ||||| || ||||| Sbjct 28972 TTCTAAAGTAATGGTTTTTCCAGTCAAAGTTTTGACGAAAATTTGCAT 29019 Score = 159 bits (176), Expect = 7e-34 Identities = 172/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| || || || | ||| | ||| | || || ||||||||||||||||||| Sbjct 29020 ACCACCGCGAAGACGCAATACTAAATGGAGAGTAGACTCCTTTTGGATGTTGTAGTCAGA 29079 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 | || || ||||| || ||||| || || |||||||| |||||||| || || || Sbjct 29080 CAATGTACGTCCATCTTCAAGTTGCTTGCCAGCAAAGATTAAACGTTGCTGATCTGGGGG 29139 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 |||||| ||||||||||||||||| || || ||| | || || || || |||| ||| || Sbjct 29140 AATACCTTCCTTGTCTTGGATCTTGGCCTTAACGTTTTCAATGGTATCAGAAGGTTCAAC 29199 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||| | ||| || || || || |||||||| || ||||| || ||||| Sbjct 29200 TTCTAAAGTAATGGTTTTTCCAGTCAAAGTTTTGACGAAAATTTGCAT 29247 Score = 159 bits (176), Expect = 7e-34 Identities = 172/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| || || || | ||| | ||| | || || ||||||||||||||||||| Sbjct 29248 ACCACCGCGAAGACGCAATACTAAATGGAGAGTAGACTCCTTTTGGATGTTGTAGTCAGA 29307 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 | || || ||||| || ||||| || || |||||||| |||||||| || || || Sbjct 29308 CAATGTACGTCCATCTTCAAGTTGCTTGCCAGCAAAGATTAAACGTTGCTGATCTGGGGG 29367 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 |||||| ||||||||||||||||| || || ||| | || || || || |||| ||| || Sbjct 29368 AATACCTTCCTTGTCTTGGATCTTGGCCTTAACGTTTTCAATGGTATCAGAAGGTTCAAC 29427 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||| | ||| || || || || |||||||| || ||||| || ||||| Sbjct 29428 TTCTAAAGTAATGGTTTTTCCAGTCAAAGTTTTGACGAAAATTTGCAT 29475 Score = 154 bits (170), Expect = 3e-32 Identities = 163/215 (76%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 282885 CGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCA 282944 ||||| |||| ||| | || ||| || ||||| || || || | | ||||| ||| Sbjct 28577 CGAAGGACCAAATGGAGTGTAGATTCCTTCTGGATATTATAATCCGATAATGTGCGTCCA 28636 Query 282945 TCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTG 283004 ||||| |||||||| || ||||| || ||||||||||| || ||||| || |||||| Sbjct 28637 TCCTCAAGTTGTTTACCAGCAAAAATTAAACGTTGTTGATCTGGAGGAATGCCTTCCTTG 28696 Query 283005 TCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATC 283064 || |||||||| ||||| ||| | || || || || || | |||||||| | ||| || Sbjct 28697 TCCTGGATCTTGGCTTTAACGTTTTCAATGGTATCTGATGGCTCGACTTCCAAAGTAATG 28756 Query 283065 GTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 |||||||| ||||| || || ||||| |||||||| Sbjct 28757 GTCTTACCAGTCAAGGTTTTGACGAAGATCTGCAT 28791 >seq981 Length=59034 Score = 147 bits (162), Expect = 5e-30 Identities = 171/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || || | |||| || | || || || ||||| |||||||| | Sbjct 46938 ACCACCACGGAGACGCAACACCAAGTGAAGGGTTGACTCCTTCTGGATATTGTAGTCGGA 46879 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 | ||| |||||||| || | ||| || || || ||||||||||||||||| || || Sbjct 46878 CAACGTACGGCCATCTTCCAATTGCTTACCAGCGAAGATCAAACGTTGTTGATCTGGTGG 46819 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| ||||| || |||||||| || ||||| || | ||||| || || || | ||| || Sbjct 46818 AATGCCCTCTTTATCTTGGATTTTGGCTTTCACATTTTCGATTGTATCTGATGGTTCCAC 46759 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 || || ||||| || ||||| ||||| || || ||||| |||||||| || Sbjct 46758 CTCTAGGGTGATGGTTTTACCAGTCAATGTTTTCACGAAGATCTGCATCTT 46708 >seq1524 Length=218836 Score = 141 bits (156), Expect = 2e-28 Identities = 168/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || || | ||| | || | || || || ||||||||||| || | Sbjct 77 ACCACCACGAAGACGCAATACTAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAATCGGA 136 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 | || || ||||| || ||||| || || || || |||||||| || || || || Sbjct 137 CAATGTACGTCCATCTTCAAGTTGCTTACCAGCGAAAATCAAACGCTGCTGATCTGGAGG 196 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 |||||| ||||||||||||||||| || || ||| | || || || || |||| ||| || Sbjct 197 AATACCTTCCTTGTCTTGGATCTTGGCCTTAACGTTTTCAATGGTATCAGAAGGTTCTAC 256 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||| | ||| || || ||||| |||||||| || || ||||| ||||| Sbjct 257 TTCTAAAGTAATGGTTTTACCAGTCAAAGTTTTGACAAATATTTGCAT 304 Score = 93.3 bits (102), Expect = 9e-14 Identities = 89/114 (78%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || || ||||| | ||| | ||| ||| || |||||||||||||||| Sbjct 305 ACCACCACGGAGACGTAGTACTAAATGAAGAGTGGATTCCTTCTGGATGTTGTAGTCAGA 364 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTC 282985 | || || ||||| || ||||| || || ||||||||||||||||| || || Sbjct 365 CAATGTACGACCATCTTCAAGTTGCTTACCAGCAAAGATCAAACGTTGCTGATC 418 >seq1657 Length=82118 Score = 93.3 bits (102), Expect = 9e-14 Identities = 102/136 (75%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 282970 TCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTAT 283029 |||||||||||||||| || || || ||||| |||||||| || ||||| || | | Sbjct 82118 TCAAACGTTGTTGGTCTGGTGGGATTCCTTCCTTATCTTGGATTTTGGCTTTCACATTTT 82059 Query 283030 CGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGA 283089 | || || || || | || || || || ||||| || || || ||||| || ||||||| Sbjct 82058 CAATCGTATCGGATGGCTCAACCTCCAGGGTGATAGTTTTGCCAGTCAATGTTTTAACGA 81999 Query 283090 ATATCTGCATTTTCAT 283105 | |||||||| || || Sbjct 81998 AGATCTGCATCTTTAT 81983 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046715971548728