Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Coboldia_20fuscipes_20[genbank_20GCA_5F001014335.1_202015-05-28]
1,732 sequences; 98,759,061 total letters
Query= NC_032111.1
Length=163005
Score E
Sequences producing significant alignments: (Bits) Value
seq1361 210 2e-49
>seq1361
Length=478162
Score = 210 bits (232), Expect = 2e-49
Identities = 372/537 (69%), Gaps = 18/537 (3%)
Strand=Plus/Minus
Query 23223 ATATTCCCCAACACGTCTTTCGAAAAAATTTGTCTTACCCTCTAATGATATATTTTCCAT 23282
|||||| ||||| |||| || ||||| || || || ||||||||||| | ||||||
Sbjct 113251 ATATTCACCAACTTTCTTTTCAAAGAAATTCGTTTTGCCTTCTAATGATATTTGTTCCAT 113192
Query 23283 AAAATCAAATGGATTAGAAGTATTATATACAGCTTTACATGATAATTCCTTTAA-AAGC- 23340
||| ||||||||| | | |||||||| ||| | ||| || | ||||
Sbjct 113191 AAATGGAAATGGATTTGTCGAATTATATA----TTTTCTCAATACCCAATTCACCAAGCA 113136
Query 23341 --CTATCTGCTACAAATTCAATATATTGACACATCAAATCATAGTTTATACCTATTAGTT 23398
| ||||||||||||||| || ||||| |||| |||| | | || ||||||| | |
Sbjct 113135 AACGATCTGCTACAAATTCTATGTATTGTGACATTAAATTACAATTCATACCTAACAAAT 113076
Query 23399 TTACTGGAATCGCATCATATAAGAATAGTTTTTCAATGGAAACAGCATCTTTAATTATTT 23458
||| || | | || ||| ||| || ||| || ||| || ||| |||||||
Sbjct 113075 CTACAGGTAGTGACTCTGTTAAAAATTCTTGTTCTATTTTAACGGCGTCTCGGATTATTT 113016
Query 23459 GAACAATAACTTCTTCACTAGGTGGATATTTTA---AATACTTAAACAATAAACATGCAA 23515
|||| | || | | | ||| | || || ||| ||| |||| |||||| ||||
Sbjct 113015 CTACAACACAGTCCT---TTGTTGGTTTTTGTACCAAATGCTTGAACATTAAACAAGCAA 112959
Query 23516 AATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCA 23575
| |||||||||| |||||||| | ||| ||||| || ||||| || | ||| ||||
Sbjct 112958 AGTCACAATGTAAACCTTCATCGCGTGAAATTAATTCGTTTGAAAAGGTCAGTCCCGGCA 112899
Query 23576 TTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAA--TGATCCGGAAAAGAAAATACC 23633
|||| || ||||| || | ||||||||||| ||||| || | ||||| | |||||
Sbjct 112898 TTAAGCCACGTTTCTTTAGCCAAAATATTGATGCAAAACTGCCACTGAAAA--ATATACC 112841
Query 23634 CTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATAATCAGAAATCCA 23693
|||||||||||||| || | | |||| ||| |||||||| | | | || |||||
Sbjct 112840 TTCAACAGCCGCAAATGCAATTATACGTTCACCGAATGTTGCTGTTTTACTTGATATCCA 112781
Query 23694 tttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTTTCAATTGCTTTTAA 23750
|| | ||| | |||||| ||||| ||| |||||||||||||| || ||
Sbjct 112780 ATTCAACGCCCAGTCTGCCTTCTTCTTTACGCACGGCATTGTTTCAATTGCATTAAA 112724
Score = 178 bits (196), Expect = 1e-39
Identities = 230/315 (73%), Gaps = 2/315 (1%)
Strand=Plus/Minus
Query 23779 ATATATGTATCAATTAGTAAACTATACATTTCAGAATGAATATTTTCAATAGCAATCTGA 23838
|| ||||||||||| | | ||| |||||||| ||||| ||||||||||||||||| ||
Sbjct 112634 ATGTATGTATCAATCAAGATACTGTACATTTCTGAATGTATATTTTCAATAGCAATTTGG 112575
Query 23839 AACCCATAAAAACATCTAGCTTCAGACAATTGAACATCATTAAAAAATCTTTTAGCTAAA 23898
|| ||||| || ||||||||||||| | ||| || || | ||||| || | |||||
Sbjct 112574 AAGCCATAGAAGCATCTAGCTTCAGTAACTTGCACTTCCTGGCTAAATCGTTCAACTAAA 112515
Query 23899 TTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAGAACATATTTTATAAAATGT 23958
||||| |||||||||||||| || ||||| || |||||||| | | ||||||
Sbjct 112514 TTTTCATTAACAATACCATCGGATGCTGCAAAAAATGCAAGAACGTGTGAGATAAAAAAC 112455
Query 23959 CTTTCATCAGTTGAT-AATTTTTTCCAATCATTAATATCTTTTGATAAATCAACTTCATC 24017
||||| | | | | | | ||| | |||||| | | || | ||||| | ||||| ||
Sbjct 112454 CTTTCTTGA-TCGTTCAGTTTCTGCCAATCCTGTAAGTCATGCGATAAGTTTACTTCTTC 112396
Query 24018 AACTGTCCAAAAACTTGCCAAGGCACGCTTATACATTAGCCAAATATCATTATGTTGTAT 24077
|||||||| || ||| || ||||||||| |||| || || | || ||| ||
Sbjct 112395 TACTGTCCAGAACGATGCTTCAGCCTTTTTATACATTTGCCATATGTCTTGATATTGAAT 112336
Query 24078 TGGAAATATTACGAA 24092
||||||||| || ||
Sbjct 112335 TGGAAATATAACAAA 112321
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 521476709784800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |