Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coboldia_20fuscipes_20[genbank_20GCA_5F001014335.1_202015-05-28] 1,732 sequences; 98,759,061 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq1361 210 2e-49 >seq1361 Length=478162 Score = 210 bits (232), Expect = 2e-49 Identities = 372/537 (69%), Gaps = 18/537 (3%) Strand=Plus/Minus Query 23223 ATATTCCCCAACACGTCTTTCGAAAAAATTTGTCTTACCCTCTAATGATATATTTTCCAT 23282 |||||| ||||| |||| || ||||| || || || ||||||||||| | |||||| Sbjct 113251 ATATTCACCAACTTTCTTTTCAAAGAAATTCGTTTTGCCTTCTAATGATATTTGTTCCAT 113192 Query 23283 AAAATCAAATGGATTAGAAGTATTATATACAGCTTTACATGATAATTCCTTTAA-AAGC- 23340 ||| ||||||||| | | |||||||| ||| | ||| || | |||| Sbjct 113191 AAATGGAAATGGATTTGTCGAATTATATA----TTTTCTCAATACCCAATTCACCAAGCA 113136 Query 23341 --CTATCTGCTACAAATTCAATATATTGACACATCAAATCATAGTTTATACCTATTAGTT 23398 | ||||||||||||||| || ||||| |||| |||| | | || ||||||| | | Sbjct 113135 AACGATCTGCTACAAATTCTATGTATTGTGACATTAAATTACAATTCATACCTAACAAAT 113076 Query 23399 TTACTGGAATCGCATCATATAAGAATAGTTTTTCAATGGAAACAGCATCTTTAATTATTT 23458 ||| || | | || ||| ||| || ||| || ||| || ||| ||||||| Sbjct 113075 CTACAGGTAGTGACTCTGTTAAAAATTCTTGTTCTATTTTAACGGCGTCTCGGATTATTT 113016 Query 23459 GAACAATAACTTCTTCACTAGGTGGATATTTTA---AATACTTAAACAATAAACATGCAA 23515 |||| | || | | | ||| | || || ||| ||| |||| |||||| |||| Sbjct 113015 CTACAACACAGTCCT---TTGTTGGTTTTTGTACCAAATGCTTGAACATTAAACAAGCAA 112959 Query 23516 AATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCA 23575 | |||||||||| |||||||| | ||| ||||| || ||||| || | ||| |||| Sbjct 112958 AGTCACAATGTAAACCTTCATCGCGTGAAATTAATTCGTTTGAAAAGGTCAGTCCCGGCA 112899 Query 23576 TTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAA--TGATCCGGAAAAGAAAATACC 23633 |||| || ||||| || | ||||||||||| ||||| || | ||||| | ||||| Sbjct 112898 TTAAGCCACGTTTCTTTAGCCAAAATATTGATGCAAAACTGCCACTGAAAA--ATATACC 112841 Query 23634 CTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATAATCAGAAATCCA 23693 |||||||||||||| || | | |||| ||| |||||||| | | | || ||||| Sbjct 112840 TTCAACAGCCGCAAATGCAATTATACGTTCACCGAATGTTGCTGTTTTACTTGATATCCA 112781 Query 23694 tttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTTTCAATTGCTTTTAA 23750 || | ||| | |||||| ||||| ||| |||||||||||||| || || Sbjct 112780 ATTCAACGCCCAGTCTGCCTTCTTCTTTACGCACGGCATTGTTTCAATTGCATTAAA 112724 Score = 178 bits (196), Expect = 1e-39 Identities = 230/315 (73%), Gaps = 2/315 (1%) Strand=Plus/Minus Query 23779 ATATATGTATCAATTAGTAAACTATACATTTCAGAATGAATATTTTCAATAGCAATCTGA 23838 || ||||||||||| | | ||| |||||||| ||||| ||||||||||||||||| || Sbjct 112634 ATGTATGTATCAATCAAGATACTGTACATTTCTGAATGTATATTTTCAATAGCAATTTGG 112575 Query 23839 AACCCATAAAAACATCTAGCTTCAGACAATTGAACATCATTAAAAAATCTTTTAGCTAAA 23898 || ||||| || ||||||||||||| | ||| || || | ||||| || | ||||| Sbjct 112574 AAGCCATAGAAGCATCTAGCTTCAGTAACTTGCACTTCCTGGCTAAATCGTTCAACTAAA 112515 Query 23899 TTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAGAACATATTTTATAAAATGT 23958 ||||| |||||||||||||| || ||||| || |||||||| | | |||||| Sbjct 112514 TTTTCATTAACAATACCATCGGATGCTGCAAAAAATGCAAGAACGTGTGAGATAAAAAAC 112455 Query 23959 CTTTCATCAGTTGAT-AATTTTTTCCAATCATTAATATCTTTTGATAAATCAACTTCATC 24017 ||||| | | | | | | ||| | |||||| | | || | ||||| | ||||| || Sbjct 112454 CTTTCTTGA-TCGTTCAGTTTCTGCCAATCCTGTAAGTCATGCGATAAGTTTACTTCTTC 112396 Query 24018 AACTGTCCAAAAACTTGCCAAGGCACGCTTATACATTAGCCAAATATCATTATGTTGTAT 24077 |||||||| || ||| || ||||||||| |||| || || | || ||| || Sbjct 112395 TACTGTCCAGAACGATGCTTCAGCCTTTTTATACATTTGCCATATGTCTTGATATTGAAT 112336 Query 24078 TGGAAATATTACGAA 24092 ||||||||| || || Sbjct 112335 TGGAAATATAACAAA 112321 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521476709784800