Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coboldia_20fuscipes_20[genbank_20GCA_5F001014335.1_202015-05-28] 1,732 sequences; 98,759,061 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq314 116 3e-21 seq1524 107 1e-18 seq1282 98.7 7e-16 seq981 82.4 5e-11 >seq314 Length=315434 Score = 116 bits (128), Expect = 3e-21 Identities = 159/222 (72%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 44120 AGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGC 44179 |||| |||||||| ||||| || ||||||||||||||||| || | | ||| Sbjct 276253 AGTCGCAACACCAAATGAAGGGTAGATTCCTTTTGGATGTTGTAGTCTGATAAGGTGCGA 276194 Query 44180 TCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCC 44239 | || |||| || || ||||||||||||||||| || ||||||| || | ||||| Sbjct 276193 CCATCTTCCAATTGTTTACCGGCAAAGATCAAACGTTGTTGATCTGGTGGAATGCCTTCT 276134 Query 44240 TTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTA 44299 || || ||||| ||| | || | || || |||| | ||| || || | ||| Sbjct 276133 TTATCTTGAATCTTGGCCTTTACATTTTCGATAGTATCGGATGGTTCAACTTCGAGGGTA 276074 Query 44300 ATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGATG 44341 || || || ||||| || |||||||| ||||| ||||||||| Sbjct 276073 ATGGTTTTACCCGTAAGAGTCTTCACAAAGATCTGCATGATG 276032 >seq1524 Length=218836 Score = 107 bits (118), Expect = 1e-18 Identities = 164/234 (70%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || || | || | ||| || | |||||| || |||||| ||||||||||| Sbjct 71 TTGCATACCACCACGAAGACGCAATACTAAGTGAAGAGTAGACTCCTTCTGGATGTTGTA 130 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 ||||| | | || | || || || ||||| || || || ||||||||||||||||| Sbjct 131 ATCGGACAATGTACGTCCATCTTCAAGTTGCTTACCAGCGAAAATCAAACGCTGCTGATC 190 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGA 44283 || ||| | ||||||||| || ||||| ||| | || | ||||| || | | Sbjct 191 TGGAGGAATACCTTCCTTGTCTTGGATCTTGGCCTTAACGTTTTCAATGGTATCAGAAGG 250 Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||| || || | ||||| || || || || | || || || || |||||||| Sbjct 251 TTCTACTTCTAAAGTAATGGTTTTACCAGTCAAAGTTTTGACAAATATTTGCAT 304 >seq1282 Length=29674 Score = 98.7 bits (108), Expect = 7e-16 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 44146 CTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAA 44205 |||||||||||||||||| || | | | || | || || || ||||| || ||||| Sbjct 29056 CTCCTTTTGGATGTTGTAGTCAGACAATGTACGTCCATCTTCAAGTTGCTTGCCAGCAAA 29115 Query 44206 GATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGT 44265 ||| ||||| |||||||||| || | ||||||||| || ||||| ||| | | Sbjct 29116 GATTAAACGTTGCTGATCTGGGGGAATACCTTCCTTGTCTTGGATCTTGGCCTTAACGTT 29175 Query 44266 TCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325 | | ||||| || | | ||| || || | ||||| || ||||| || | || || || Sbjct 29176 TTCAATGGTATCAGAAGGTTCAACTTCTAAAGTAATGGTTTTTCCAGTCAAAGTTTTGAC 29235 Query 44326 GAAGATTTGCAT 44337 ||| |||||||| Sbjct 29236 GAAAATTTGCAT 29247 Score = 98.7 bits (108), Expect = 7e-16 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 44146 CTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAA 44205 |||||||||||||||||| || | | | || | || || || ||||| || ||||| Sbjct 29284 CTCCTTTTGGATGTTGTAGTCAGACAATGTACGTCCATCTTCAAGTTGCTTGCCAGCAAA 29343 Query 44206 GATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGT 44265 ||| ||||| |||||||||| || | ||||||||| || ||||| ||| | | Sbjct 29344 GATTAAACGTTGCTGATCTGGGGGAATACCTTCCTTGTCTTGGATCTTGGCCTTAACGTT 29403 Query 44266 TCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325 | | ||||| || | | ||| || || | ||||| || ||||| || | || || || Sbjct 29404 TTCAATGGTATCAGAAGGTTCAACTTCTAAAGTAATGGTTTTTCCAGTCAAAGTTTTGAC 29463 Query 44326 GAAGATTTGCAT 44337 ||| |||||||| Sbjct 29464 GAAAATTTGCAT 29475 Score = 87.8 bits (96), Expect = 1e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 44147 TCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAG 44206 || |||||||||||||| || | | | || | || || || || || || ||||| Sbjct 28829 TCTTTTTGGATGTTGTAGTCAGATAATGTACGACCATCTTCAAGTTGTTTACCAGCAAAA 28888 Query 44207 ATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT 44266 |||||||| |||||||||| || | ||||||||| || ||||| ||| | || Sbjct 28889 ATCAAACGTTGCTGATCTGGTGGAATACCTTCCTTGTCTTGGATCTTGGCCTTAACATTT 28948 Query 44267 CCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACG 44326 | ||||| || | | ||| || || | ||||| || ||||| || | || || ||| Sbjct 28949 TCAATGGTATCAGAAGGTTCTACTTCTAAAGTAATGGTTTTTCCAGTCAAAGTTTTGACG 29008 Query 44327 AAGATTTGCAT 44337 || |||||||| Sbjct 29009 AAAATTTGCAT 29019 >seq981 Length=59034 Score = 82.4 bits (90), Expect = 5e-11 Identities = 146/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 44125 CAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTC 44184 |||||||| |||||| || |||||| ||||| ||||| |||| | || | || Sbjct 46923 CAACACCAAGTGAAGGGTTGACTCCTTCTGGATATTGTAGTCGGACAACGTACGGCCATC 46864 Query 44185 GTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTC 44244 |||| ||||| || || ||||||||||| || ||||||| || | || || || || Sbjct 46863 TTCCAATTGCTTACCAGCGAAGATCAAACGTTGTTGATCTGGTGGAATGCCCTCTTTATC 46804 Query 44245 CGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGT 44304 || || |||| || | || || || | | ||||||||| | || || || Sbjct 46803 TTGGATTTTGGCTTTCACATTTTCGATTGTATCTGATGGTTCCACCTCTAGGGTGATGGT 46744 Query 44305 CTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || || | || ||||||||||| ||||| Sbjct 46743 TTTACCAGTCAATGTTTTCACGAAGATCTGCAT 46711 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359982801052644