Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Coboldia_20fuscipes_20[genbank_20GCA_5F001014335.1_202015-05-28]
1,732 sequences; 98,759,061 total letters
Query= NC_033423.1
Length=208501
Score E
Sequences producing significant alignments: (Bits) Value
seq1606 118 1e-21
seq922 118 1e-21
seq146 102 1e-16
>seq1606
Length=54755
Score = 118 bits (130), Expect = 1e-21
Identities = 228/334 (68%), Gaps = 2/334 (1%)
Strand=Plus/Minus
Query 50474 AGGAGATTTAGGACCTGTTTACGGTTTTCAATGGAGACATTTTGGAGCGCGTTACATAAA 50533
||| ||||| || || ||||||||||||||||||||||||||||| || || | ||
Sbjct 17239 AGGTGATTTGGGTCCCGTTTACGGTTTTCAATGGAGACATTTTGGCGCCGACTATAATAA 17180
Query 50534 TTGCGACGTAAATTACGAAGGTCAAGGCGTGGATCAACTGCAAAAAATTATAACGACGTT 50593
||| | ||||| |||||| || || |||||||| || | |||| | | |
Sbjct 17179 TTGTCATACTGATTACTCAGGTCATGGGGTTGATCAACTAGCCGAAGTGATAAAAAAGAT 17120
Query 50594 GAAAACAAACCCCGACGATCGGCGTATTTTAATGACCGCCTGGAATCCAACCGATATAGA 50653
||| ||| || ||||| |||||| | ||| | || |||||||||| | |||
Sbjct 17119 TAAAGAAAATCCAACTGATCGTCGTATTATCATGTCTGCATGGAATCCAATACAAATACC 17060
Query 50654 TCAAACCGTTTTACCTCCGTGTCA-TGTTTTATGTCAATTTTATGCCACAGACAATGTTT 50712
|||| | || || || || || ||| || | ||||| | || | || || |
Sbjct 17059 ACAAATGGCATTGCCGCCTTGCCATTGTCTTGT-ACAATTCTTTGTAGCTAACGGTGAAT 17001
Query 50713 TATCCTGTCAATGTTATCAAAGATCAGCTGATATGGGTTTAGGCGTTCCTTTCAACGTAG 50772
|||| |||||| ||| ||||| |||||||||||||| | || || || || || || |
Sbjct 17000 TATCGTGTCAACTTTACCAAAGGTCAGCTGATATGGGACTTGGTGTACCATTTAATGTCG 16941
Query 50773 CTTCTTACGCTTTATTAACGTATTTGATCGCTCA 50806
| ||| || | ||||| || |||| || ||
Sbjct 16940 CCAGTTATGCACTCTTAACATACATGATTGCACA 16907
>seq922
Length=449141
Score = 118 bits (130), Expect = 1e-21
Identities = 224/327 (69%), Gaps = 2/327 (1%)
Strand=Plus/Minus
Query 155730 CGACTCAACGCCGTCGATTGAGCGGCGCGTACCAACCCTTCCAATTCAGCGCCGCTGTAA 155789
||| ||| |||| ||||| || || ||||| || ||||| | ||||| || ||| ||
Sbjct 232458 CGATTCATTGCCGATGATTGTGCAGCACGTACTAAACCTTCAATCTCAGCTCCACTGAAA 232399
Query 155790 TTTTTAGTTT-CAACGGCTATTTTATTTAAGTCTACGTCGGAAGCTAATATGTTGTGAGA 155848
|||||||||| | ||| ||| | | | || || || | | | | | ||||
Sbjct 232398 TTTTTAGTTTTCGACGCTAATTCTCGTATATTC-ACATCTGGATTGATTTTTTTGTATTC 232340
Query 155849 TTTCATTTTAGCAACGTGCACCTTTAAAATTTGAAGACGCCCCTTTTCATCGGGTAATCC 155908
|||||| ||| ||| | || ||||| || | ||| || | ||||||||||| |
Sbjct 232339 TTTCATACGAGCTGTGTGAATGTTCAAAATCTGTACACGACCATCCTCATCGGGTAAACT 232280
Query 155909 AATTTCTATCTTCAATTCCAACCGCCCAGGTCTTAATAATGCTTCGTCAATTAAGTCGGG 155968
||||| | | | ||||| || || |||| | | ||||| ||||| | ||
Sbjct 232279 GATTTCAACTTGTACCTCCAATCGACCCGGTCGCATCAGAGCTTCATCAATCATATCCTT 232220
Query 155969 TCTGTTGGTCATACCTATGATTAAAATGTTGTTTAAAGATTCTACACCGTCTATTTTAGA 156028
||| ||||||||||| || | ||||| ||||| || ||| ||||| || |||||||
Sbjct 232219 TCTATTGGTCATACCAATTACCAAAATATTGTTCAATTGTTCAACACCATCGATTTTAGC 232160
Query 156029 CAATAATTGATTGACTACGGCGTCGTG 156055
|| ||||||||||| |||| ||| ||
Sbjct 232159 TAACAATTGATTGACAACGGTGTCATG 232133
>seq146
Length=262349
Score = 102 bits (112), Expect = 1e-16
Identities = 112/149 (75%), Gaps = 0/149 (0%)
Strand=Plus/Minus
Query 63745 ATACCAGAAATAGGTGATAAATTTGCTTCTTTTACAGCTCAAAAAGGTACGTGTGGTATG 63804
||||| |||| |||||||||||||| ||| | |||||| ||||| ||||||||
Sbjct 198702 ATACCCCAAATTGGTGATAAATTTGCATCTCGGCACGGTCAAAAGGGTACCTGTGGTATA 198643
Query 63805 ATTTATCGACAAGAAGATATGCCTTTTACCAAAGACGGTATCGTACCCGATCTCGTCATC 63864
||||| |||||||| ||||| |||||| || || ||| ||||||| | | |||
Sbjct 198642 CAGTATCGTCAAGAAGACATGCCGTTTACCTGCGAAGGGATCACACCCGATATTATTATC 198583
Query 63865 AATCCACACGCTTTTCCCAGTCGTATGAC 63893
||||| |||||| |||| ||| |||||
Sbjct 198582 AATCCTCACGCTATTCCGTCTCGGATGAC 198554
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 667060757821920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |