Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq139863 260 1e-64 >seq139863 Length=2592 Score = 260 bits (288), Expect = 1e-64 Identities = 490/713 (69%), Gaps = 12/713 (2%) Strand=Plus/Plus Query 16016 CCCAGTTCCGTAACTAATCTATCTGCTACAAATTCTATATATTGACACATTAAGTCGCAA 16075 |||| ||| | | ||||| || || |||||||| |||||||| ||||||| | |||| Sbjct 1299 CCCAATTCTCTCAATAATCGGTCAGCAACAAATTCAATATATTGCGACATTAAATTGCAA 1358 Query 16076 TTAATTCCTATAAGTCGTACCGGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACAACC 16135 || || || || | ||| || | || | |||||||||| |||||| || || Sbjct 1359 TTCATACCAATTAAATTTACAGGTAATGCGTCAGTTAAAAATTCTTGTTCAATTTTCACT 1418 Query 16136 GCTTCTTTAATGATATCGGTGGCTCGTGTTTCAGACGGTGTATGGTTTAGGTGTTTAAAC 16195 ||||| || || || | || | || | ||| | || ||| ||||||||| Sbjct 1419 GCTTCAGATATAATTTCAATAATTCTTTCTTTACTTGGTTTTTGTATTAAATGTTTAAAC 1478 Query 16196 ATTAGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAA 16255 |||| ||| || || || ||||||| |||||| ||||| || ||||| || ||||| Sbjct 1479 ATTAAACATGCAAAATCACAATGTAATCCTTCATCTCTTGAAATTAGTTCATTTGAAAAT 1538 Query 16256 GTTAACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAA 16315 ||||| |||||||| || ||||| |||||||| ||||| | ||||| || | Sbjct 1539 GTTAATCCTGGCATAAGGCCACGTTTTTTTAACCAAAATATTGATGCAAAACTACCACTA 1598 Query 16316 AAGAATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTA 16375 |||||||| || ||||| | ||||||||| || | ||||| | || |||| |||| Sbjct 1599 AAGAATATTCCTTCAACTGCTGCAAAAGCAATAATACGTTCTCCATAATTAGCTGATTTA 1658 Query 16376 TTACGAATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATG 16435 | ||||| | | |||| || ||||||| ||| | ||| | ||||| || Sbjct 1659 CTTGTTATCCAATCTAATGCCCAATCAGCTTTTTTTTTAACACATGGTAATGTTTCAATT 1718 Query 16436 GCCTTAAACA--ATTTCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAAC 16493 || ||||| | | ||||||| | || ||| ||||||| |||||||| | | | Sbjct 1719 GCATTAAAAAGGAAATCTCTTTCTTTTG--GATCCTTTATATATGTATCAATTAAAATGC 1776 Query 16494 TGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCT 16553 |||||||||| || || | || || || ||||| ||||||||||| || || || || | Sbjct 1777 TGTACATTTCGGAATGAACATTTTCCATAGCTATTTGAAATCCATAAAAACAACGCGCTT 1836 Query 16554 CCGCTATTTGTACTTC--CACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTC 16611 | | || ||| ||||| || ||||| ||||| | || || || || || ||||| || Sbjct 1837 CAGTTACTTGAACTTCTTGAC-TAAAA-CGTTCAACAAGATTTTCGTTAACTATACCATC 1894 Query 16612 ACTTGCAGCAAAAAACGC--CAATATGTGCTTAATGAAATATTTTTCGTCAGATGTAAGA 16669 ||||||||||| || || ||||| | ||||||| ||| |||| || | Sbjct 1895 TGAAGCAGCAAAAAATGCTAAAACATGTGAT--ATGAAATGACGTTCTCCAGAAGTTAAT 1952 Query 16670 ATATGCCAATCTTTTAAATCTTTGGATATATCCACTTCTTCTGGCGTCCAAAA 16722 | | ||| || | | ||| || |||| ||| ||||| || ||||||||| Sbjct 1953 TTGTTCCAGTCCGTCATATCCTTTGATAAATCAACTTCCTCAACCGTCCAAAA 2005 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 510063518040440