Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq210017 426 2e-114 seq139863 378 8e-100 seq105373 338 7e-88 seq1919 87.8 2e-12 >seq210017 Length=1697 Score = 426 bits (472), Expect = 2e-114 Identities = 1011/1514 (67%), Gaps = 34/1514 (2%) Strand=Plus/Plus Query 52799 TTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCC 52858 || || | |||||| ||||| | | | || ||||| || | || ||| |||||||| Sbjct 40 TTATCTACTGTGAACTGAATAGCATTTGCAGCAGGTTTTGTTCTTAAATAATACATTCCA 99 Query 52859 GTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTTGTTAGTTTGGAATAACTCGGA 52918 |||||||| || |||| | |||||||| || || | ||| ||| |||| Sbjct 100 GTTTTTAGTCCAGCTTTCCAAGCATAAAAATGAATTGAAGTCAATTTACCATAGTTCGGT 159 Query 52919 TCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCC 52978 || || | ||| ||||| | |||||||||||||| || || ||||| | || ||| Sbjct 160 TCAGCCACATGAATATTAAATGATTGACTTTGATCAATAAAAGCTCCACGATCACAAGCA 219 Query 52979 ATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATC 53037 | ||| | || | | |||||||| | || ||||| || || |||| ||| Sbjct 220 TAATCTATTGTACTCCTAACAGATATTTCCCATACCGTCTTATACAAATCTCTTA-TATT 278 Query 53038 TTCTGGAAGGTTTG---TATTCTGAATAGATCCACCATCTACCATAATCCTATTCTTGAT 53094 || |||| ||| |||| |||||||| |||| || | || || || || || Sbjct 279 TTGAGGAATCTTTTCAATATTTTGAATAGACCCACGATTTGAAATGATTAAGTTTTTCAT 338 Query 53095 CTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTG 53154 ||||||| ||| || | | || || | | || | | | ||| ||||||| | ||| Sbjct 339 ATCATCATCCCACAAATCTAGTTCTGTAAGATCTTTTAACAAATGATGATTAACAATTTG 398 Query 53155 AAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTC 53214 ||||| ||||| || || | ||| | || ||||| || || ||||| | || || Sbjct 399 GAATTCACCAGATAAAACCCGGCGATTATATATATTTGATGTGTATGGTTCAAATGATTC 458 Query 53215 ATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATT 53274 ||| || ||||||||||| || |||||||| || ||||| ||||| | ||||| ||| Sbjct 459 ATTGTTACCCAAAATTTGTGCGGTTGATGCTGTTGGCATTGGTGCAATTAATAACGAATT 518 Query 53275 TCTAAGACCGTATGTTCTG--ATTTTATCTTTTAGAGGTTC---CCAATTCCAAAGATCC 53329 || || ||| ||||| | |||||||| |||| ||| ||||| ||| | || Sbjct 519 TCGAACACC--ATGTTGAGCAATTTTATCCTTTAA---TTCAGACCAATCCCATAAATTT 573 Query 53330 GACGGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACA 53389 | || | ||||| |||||| ||||| | || ||| || Sbjct 574 GTTGGGATTTTATTCCACATGTCATATTGTAAAATACCCTTACTTACAGGGGAGCCTTCA 633 Query 53390 TATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAA 53449 ||||| || || || || | | ||||| ||||||||| || ||||| || || || Sbjct 634 TATGTTTCATAAGGACCCAATTCTTGAGCTAATTCACAACTAGCTTCTAAGGCGCCATAG 693 Query 53450 TAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGT-GCTTCCAGGCTATCAAATGGATA 53508 ||||| ||||| || || || || || || | | ||||| ||| ||| | ||| | Sbjct 694 TAAATAGTTTCAAAAAT-TTGTTGGTTCAATAATTTAGCTTCTTTGCTTTCATAAGGAAA 752 Query 53509 ATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCT 53568 | | || ||||| || || || | ||| || || ||||| || || |||||||| | Sbjct 753 ACGCATTAGTATAAAAGCATCAGCAAGTCCCTGTACCCCAATTCCAATTGGTCTATGCCG 812 Query 53569 CTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAG 53628 ||| || ||| |||||| || | |||||||||||| | ||||||||||||||| | Sbjct 813 TAAATTTGATTTTTTAGCTTCGGGGACAGGATAATAATTTACATCTATAATTTTATTTAA 872 Query 53629 GTTTCTG---ACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAA----TTGTC 53681 ||| | | |||| ||||| |||| || | ||| || ||||| || || Sbjct 873 ATTTTTCGTTATAATT--TTTGAA-ACATGTTTTAATTTATTGAAGTCAAAGGTTTTATC 929 Query 53682 CATCTATTACAAACATGTTCAATGCAATAGATGCCAGATTACAAACGGCTACCTCATTAG 53741 | | || ||||| || | || ||||| |||| |||||| || || | |||| | Sbjct 930 CTGAGAA-ACGAACATATTAAGAGCTATAGACGCCAAATTACATACAGCAATTTCATCTG 988 Query 53742 CATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTT 53801 | ||| | | || |||||||| | |||||| || || ||||| | ||||| Sbjct 989 GCGAAGAATACTCCACAATTTCAGTGCATAAATTACTGCAACGAATTGTTCCCACATTTT 1048 Query 53802 GTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGCGTACCAGTTTCAA 53861 | ||||| || ||| | ||||| ||||| || || || ||| | || || || || |||| Sbjct 1049 GCTGATTGCTTTTTCTATTACAAGCATCTTTGTATAGCATGTAAGGTGTTCCTGTCTCAA 1108 Query 53862 TCTGGGATTCTATAATCGCTTTCCAGACGACACGAGCCTTTATTATAGATTTGTATCTCT 53921 ||| || || ||||| || ||| | | ||||||||| | || || |||| Sbjct 1109 CCTGTGACTCAATAATTGCAAACCAAAGTGTTTGTGCCTTTATTTTT--TTATTAGCTCT 1166 Query 53922 TTTCTCTTTCGTATAGT--GTATACAATCGTTCAAACTCGTCTCCCCAAACATTGTCCAA 53979 |||||| ||| | ||||| ||| ||| || || || ||||| |||| || || Sbjct 1167 ACCCTCTTTTTCATATTTAGTATATAATTCTTCGAATTCCTCACCCCATACATCGTGTAA 1226 Query 53980 TCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCAT 54039 || || || | || || ||||| || ||||| || |||| | |||| |||||| Sbjct 1227 ACCTGGGCACTTATGTGGGCACATTAAAGACCATTCATCGTCGGATTCAACTCTTTTCAT 1286 Query 54040 AAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCC 54099 ||| | ||| || ||||| | ||| ||| |||||||||| || |||||| ||||| Sbjct 1287 AAACAAATCTGGTATCCACAAAGCATAAAACAGATCTCTGGCTCGTGTTTCCTCTTTTCC 1346 Query 54100 TGTATTCTT-TTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATA 54158 |||||||| |||||| || | || | | |||||||||||||| ||||| | |||| Sbjct 1347 AGTATTCTTCTTTAAG-TCTAAAAATTCAAGTATATCAGAATGCCATGGTTCTAGATATA 1405 Query 54159 TGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTAT 54218 | | | | |||| |||| ||| ||||| || || || | ||||| ||| ||||| Sbjct 1406 TTGCAAAAGCTCCTGGCCTTTTATTTCCACCTTGGTCAACGTATCGAGCAACATTATTGA 1465 Query 54219 AAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTC 54278 ||||||||||||| || | | || || || | ||||| || || | || ||| Sbjct 1466 AAACTCTCAACATAGGTACTAAGCCGTTAGAAACCCCATTTGTACCAGCAATTGTTGTTC 1525 Query 54279 CACTGGCACGAATA 54292 | | ||||||||| Sbjct 1526 CTGTTGCACGAATA 1539 >seq139863 Length=2592 Score = 378 bits (418), Expect = 8e-100 Identities = 521/725 (72%), Gaps = 3/725 (0%) Strand=Plus/Plus Query 23945 AAATCCCAATTCAGAAATCAATCTATCTGCGACAAACTCCATATATGTTTTCATCATTTC 24004 || ||||||||| | |||| || || ||||| || |||||| ||| | | Sbjct 1295 AACTCCCAATTCTCTCAATAATCGGTCAGCAACAAATTCAATATATTGCGACATTAAATT 1354 Query 24005 ACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGA 24064 |||||||| || || | || || || | || |||| | ||||||||||||||| Sbjct 1355 GCAATTCATACCAATTAAATTTACAGGTAATGCGTCAGTTAAAAATTCTTGTTCAATTTT 1414 Query 24065 GACCGCGTCTGTTATAATAGATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTTT 24124 || || || | |||||| | | | |||||| ||| ||| | | ||||||||| Sbjct 1415 CACTGCTTCAGATATAATTTCAATAATTCTTTCTTTACTTGGTTTTTGTATTAAATGTTT 1474 Query 24125 AAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGA 24184 |||||| |||||||| ||||| || |||| || || ||||| ||||| ||| || || Sbjct 1475 AAACATTAAACATGCAAAATCACAATGTAATCCTTCATCTCTTGAAATTAGTTCATTTGA 1534 Query 24185 AAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCC 24244 ||| || | ||| ||||| |||||||| ||||| | ||||||||| || ||||| || Sbjct 1535 AAATGTTAATCCTGGCATAAGGCCACGTTTTTTTAACCAAAATATTGATGCAAAACTACC 1594 Query 24245 AGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAACCGGC-GC 24303 | |||||| |||||||| ||||| ||||| ||||||| | |||||||||| || | Sbjct 1595 ACTAAAGAATATTCCTTCAACTGCTGCAAAAGCAATAATACGTTCTCCATAATTAGCTGA 1654 Query 24304 TGT-CATGT-ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTC 24361 | | | ||| ||||| | | |||||||| || || ||||| ||||| || | ||| || Sbjct 1655 TTTACTTGTTATCCAATCTAATGCCCAATCAGCTTTTTTTTTAACACATGGTAATGTTTC 1714 Query 24362 TATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAG 24421 || |||||||| || | | | |||| || ||| || | |||||||||||| |||| Sbjct 1715 AATTGCATTAAAAAGGAAATCTCTTTCTTTTGGATCCTTTATATATGTATCAATTAAAAT 1774 Query 24422 ACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGC 24481 || |||||||| ||||||| ||||| || || ||||||||||| || ||||| | || Sbjct 1775 GCTGTACATTTCGGAATGAACATTTTCCATAGCTATTTGAAATCCATAAAAACAACGCGC 1834 Query 24482 CTCGGTAATCTGTACTTCTATACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTC 24541 || || | || |||||| || ||| ||||| | | |||||| || ||||| || || Sbjct 1835 TTCAGTTACTTGAACTTCTTGACTAAAACGTTCAACAAGATTTTCGTTAACTATACCATC 1894 Query 24542 ACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTT 24601 || |||||||| || || |||||| ||| |||| ||| | | |||| ||| Sbjct 1895 TGAAGCAGCAAAAAATGCTAAAACATGTGATATGAAATGACGTTCTCCAGAAGTTAATTT 1954 Query 24602 ATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTC 24661 ||||| || | ||||| || |||| ||| ||||| || || |||||||| ||||| || Sbjct 1955 GTTCCAGTCCGTCATATCCTTTGATAAATCAACTTCCTCAACCGTCCAAAAAGATGCTTC 2014 Query 24662 TGCCT 24666 |||| Sbjct 2015 AGCCT 2019 >seq105373 Length=2707 Score = 338 bits (374), Expect = 7e-88 Identities = 708/1049 (67%), Gaps = 17/1049 (2%) Strand=Plus/Plus Query 53121 TTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAG 53180 ||||| || ||| | || ||||||||||||||||||| ||||| | |||| | | Sbjct 46 TTAAATCTTTAATTAAGTGATGATTAACTACTTGAAATTCACCAGAAAGAACTCGTCTAT 105 Query 53181 TGTAAATATTACTGGTATACGGTTCCACAGACTCATTATTTCCCAAAATTTGAGCAGTTG 53240 |||| ||||| |||||||| || | ||| || ||||| || |||||||| ||||| | Sbjct 106 TGTATATATTTGAAGTATACGGCTCAAAAGATTCGTTATTACCTAAAATTTGTGCAGTAG 165 Query 53241 ATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTGATTTTAT 53300 |||| || |||||||| || | ||||| ||| | | || | | | |||||| | Sbjct 166 ATGCGGTTGGCATAGGGGCAATCAATAGTGAATTCCGGACGCCATGTTTAGCGATTTTTT 225 Query 53301 CTTTTAGAGGTTC---CCAATTCCAAAGATCCGACGGTACAACNNNNNNNNNNNNNNNTT 53357 |||||| || || ||||| ||| | |||| ||| | Sbjct 226 CTTTTA-AG--TCAGACCAATCCCACAAGTCCGTGGGTGTTTTATTCCACATATCATACT 282 Query 53358 GTAGAATACCGTTACTGGCGTACGATCCTACATATGTATCGTATGGTCCTTCCTTCTCAG 53417 | | |||||| ||||| | ||| || ||| || || |||| || | || || | Sbjct 283 GCAAAATACCTTTACTTACAGGCGAACCGTTATAGGTTTCATATGAACCATATTTTTCCG 342 Query 53418 CTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTA 53477 ||| |||||||| || || || |||||||| ||||| ||||| || |||| | ||| | Sbjct 343 CTAACTCACAACTGGCTTCCAAAGCACCGTAGTAAATTGTTTCAAAAATCTGTTGATTCA 402 Query 53478 GATCTTGT-GCTTCCAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAAT 53536 || | | ||||| || ||| | |||||| || || ||||| ||||| || ||| Sbjct 403 -ATAATCTAGCTTCTTTACTTTCATAAGGATAACGCAATAGGATAAAAGCGTCCGCCAAT 461 Query 53537 CCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATA 53596 |||||||| ||||| || || |||| ||| || |||||| ||| ||| ||||||| Sbjct 462 CCTTGAACTCCAATTCCAATTGGTCGATGCCTAAAATTAGATTTTTTAGCCTCTGGAAGT 521 Query 53597 GGATAATAATTAATATCTATAATTTTATTGAGGTTTCTGACAATTACTTTGACCACATCC 53656 || ||||| || | ||||||||||||||| | ||||| || | |||| |||| Sbjct 522 GGGTAATAGTTTACATCTATAATTTTATTCAAATTTCTTGTTATAATTTTGGAAACATTT 581 Query 53657 TTCAGTTTGAGAAAATCAAATTGTCCAT---CTATTACAAACATGTTCAATGCAATAGAT 53713 |||| || | ||||||||| | ||||| || |||||||| || | ||||||||| Sbjct 582 TTCAATTCAATAAAATCAAACTTTCCATTTGGTAACACAAACATATTTAGAGCAATAGAT 641 Query 53714 GCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGA 53773 |||| ||| |||||||| | |||| | | | ||||| | || || || || | | Sbjct 642 GCCAAATTGCAAACGGCAATTTCATCTGAACAAGAATATTCCACAATTTCTGTACACAAA 701 Query 53774 TTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTA 53833 || || || || ||||| | ||||| ||||||||| || ||| || | || || Sbjct 702 TTGCTGCAACGAATTGTTCCAAGATTTTTTTGATTACTTTTACGGTTGCAAGTGTCTTTG 761 Query 53834 TAAAGAATGAATGGCGTACCAGTTTCAATCTGGGATTCTATAATCGCTTTCCAGACGACA 53893 || | || |||| |||||||||||| || | ||| | || ||| | | Sbjct 762 TACATTATATATGGATTACCAGTTTCAACTTGAGCTTCAACTATACTAAACCACAACGCT 821 Query 53894 CGAGCCTTTATTATAGATTTGTATCTCT--TTTCTCTTTCGTATAGTGTATACAATCGTT 53951 |||||||| | ||| || ||| | || ||| |||| ||| | |||| || Sbjct 822 CGAGCCTTAACTAT--TTTAGTAGCCCTACCTTCGTTTTCATATTTTTCGTACAGATTTT 879 Query 53952 CAAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACC 54011 || || || ||||| |||| | ||| || ||||| | | |||||||| || |||| Sbjct 880 TGAATTCATCACCCCAGACATCGAACAAACCCGGACACTTGTGTGGACACATTAAAGACC 939 Query 54012 ACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AAT 54070 | || || | || | | |||| |||||| | ||| |||||||| | | | ||| || Sbjct 940 AATCACCATTATTTTCTAAGCGTTCCATAAATAAATCTGGAATCCATA-ACCCATAGAAG 998 Query 54071 AGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 54130 |||||||| | | | ||| || ||||| ||||| ||||| | ||| | || | | Sbjct 999 AGATCTCTTGCACGAATTTCTTCTTTTCCGGTATTTTTTTTCAAATCTAAAAATTCAAAT 1058 Query 54131 ATATCAGAATGCCACGGTTCCAAGTATAT 54159 ||||| | |||||||||||| || || || Sbjct 1059 ATATCTGCATGCCACGGTTCTAAATAAAT 1087 >seq1919 Length=1291 Score = 87.8 bits (96), Expect = 2e-12 Identities = 111/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 54517 ATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTT 54576 ||| || || || || || | ||| | |||||| || ||||||||| | || || | || Sbjct 45 ATGTATGCCCACCGCTACTCTCATAAGCATGTGTTGCGGTCTTTCAGCTATTTTCCTATT 104 Query 54577 TATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTC 54636 || ||| | | || || ||||| ||||||||||||||||| |||||| ||| || Sbjct 105 TACTTTTAAGAGATATGAACGCTCCAATGTTTTAAAACCAAAATAATTGTATCCAAAATC 164 Query 54637 TCGTTCGTAAATAATAACTGAGTTGAGTTTATC 54669 || || || ||||| | || || |||||||| Sbjct 165 CCGATCATATATAATTGCAGAATTTAGTTTATC 197 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592153306658160