Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_002185.1 Length=35466 Score E Sequences producing significant alignments: (Bits) Value seq111081 168 2e-37 >seq111081 Length=2465 Score = 168 bits (186), Expect = 2e-37 Identities = 186/248 (75%), Gaps = 0/248 (0%) Strand=Plus/Plus Query 5451 GCAGTAGCATCTTTCAGCCTTGCGGTTAACCGTAACTTTAAGGATGCTAATGGTGAGCGT 5510 ||||| ||| | || | ||| ||| | ||||||||||||| | |||| ||||| | ||| Sbjct 2218 GCAGTGGCAACCTTTACCCTAGCGTTAAACCGTAACTTTACGAATGCAAATGGAAATCGT 2277 Query 5511 GAAGCAGACTTTATCAATTGCGTTATCTGGCGCCAGCAAGCTGAAAATTTGGCTAATTGG 5570 |||||||| ||||| || || || || ||||| | | ||||||| ||||||||| Sbjct 2278 GAAGCAGATTTTATTAACTGTGTGATTTGGCGTAAACCTGCTGAAACAATGGCTAATTAT 2337 Query 5571 GCTAAAAAAGGCGCATTAATTGGAATCACTGGACGTATTCAGACTCGTAGCTATGAAAAC 5630 || || |||||| |||| | || | ||||| ||||| || || | | |||||| || Sbjct 2338 GCCAAGAAAGGCACATTGCTAGGTGTAACTGGTCGTATCCAAACGAGAAACTATGAGAAT 2397 Query 5631 CAACAGGGTCAACGAGTGTATGTGACAGAGGTAGTCGCTGAGAATTTCCAAATGCTAGAA 5690 ||||| |||||||| || |||||||| || | ||| || ||||||||| || ||||| Sbjct 2398 CAACAAGGTCAACGTGTTTATGTGACTGAAATTGTCTGCGATAATTTCCAACTGTTAGAA 2457 Query 5691 AGCCGTGC 5698 || ||||| Sbjct 2458 AGTCGTGC 2465 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 113085111530312