Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_002214.1 Length=39807 Score E Sequences producing significant alignments: (Bits) Value seq205685 114 3e-21 >seq205685 Length=35797 Score = 114 bits (126), Expect = 3e-21 Identities = 291/432 (67%), Gaps = 13/432 (3%) Strand=Plus/Minus Query 1598 GCTTCATGGAGCTAAACGAGCGAGTAAGACCGTTGTTAACAATGATACATTTGTAACCGA 1657 ||| |||||||| || || | |||| || | || ||||| |||| | ||| Sbjct 21450 GCTGCATGGAGCGAAGCGGTCAGGTAAAACGAAAATAAATAATGACTTATTTCTGTTCGA 21391 Query 1658 ATTAAGTCGTGTCAGAAAAATTGCTGAC--CGATTAGGTGTAGATGAGCCTATTTACATT 1715 ||| | ||||| |||||||| || || ||| ||| ||| | ||||| || ||||| Sbjct 21390 GTTACGACGTGTTAGAAAAATAGCCGATGACGA--AGGCGTAAAAGAGCCGATGTACATA 21333 Query 1716 TTGGCAGGTACGTCTTCAA--CAGCAATTCAGAATAACGTCTTACAAGAACTTTATAACA 1773 || || ||| || | || | | ||||| || ||| | || ||||| || ||||| | Sbjct 21332 TTAGCTGGT--GTTTCCAGTTCGACGATTCAAAAGAACATATTGCAAGAGCTATATAATA 21275 Query 1774 AGTATGGCTTTGAACCAAAATACGATAAACATGGCTCTTTCGTTTTCTGTGGTGTCAAAG 1833 ||| | | ||||| || || || ||||| || ||| || | ||| || || | Sbjct 21274 TGTACAACATCGAACCTAAGTATGACAAACACGGAAATTTTAAGTTGTTTGGCGTGAAGG 21215 Query 1834 TCGTGCAGGTCTATACTGGCTCTATATCTGGTCTTAAACGTGCCCGTGGTTTTACAGCGT 1893 | || || | |||||| || ||| || || | | | ||| | ||||| | Sbjct 21214 TGGTACAAGCCTATACGGGAAATATTGGAGGCGTTGGAGCTATTAGAGGTATGACAGCTT 21155 Query 1894 TCGGAGCTTATGTCAACGAAGCGTCGCTAGCCAAT-GAGTTTGTTTTTAAAGAGATTATC 1952 |||| |||||||| |||||||||||||||||||| ||| || ||| ||| ||| | Sbjct 21154 TCGGTGCTTATGTAAACGAAGCGTCGCTAGCCAAGCGAGAA-GTGTTTGCAGAAATTGTA 21096 Query 1953 TCACGCTGTTCTGGTGATGGTGCTCGTGTTGTTTGG-GATAGTAACCCAGATAATCCTAA 2011 || || |||||||| |||||| | | | || || |||| ||||||||||| || | Sbjct 21095 TCGCGTTGTTCTGGAACTGGTGCAAG-GATATTAGGCGATACAAACCCAGATAACCCAGA 21037 Query 2012 TCACTGGCTTAA 2023 || ||| |||| Sbjct 21036 ACATTGG-TTAA 21026 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 126941453100626