Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_002520.1 Length=232392 Score E Sequences producing significant alignments: (Bits) Value seq109337 138 2e-27 seq23123 109 8e-19 seq202708 100 4e-16 seq69589 95.1 2e-14 >seq109337 Length=3741 Score = 138 bits (152), Expect = 2e-27 Identities = 205/291 (70%), Gaps = 0/291 (0%) Strand=Plus/Plus Query 10337 AAAATCTGCAGGAATGGATTTAAAAAGTGCATATGATTATATTGTTTCAGCACATGATAA 10396 |||| |||| || ||||||||| ||| ||||| | || || ||||| | || || Sbjct 363 AAAAGCTGCCGGGTATGATTTAAAATCTGCTTATGACTGTACGGTCCCAGCAAAAGACAA 422 Query 10397 AAAATTAATAAAAACTGATTTAATTATAGAAATTCCTAAAGGATGTTATGCAAGATTAGC 10456 | || |||||||||||| || || ||| |||| |||| || | || Sbjct 423 GTTTCTGATCAAAACTGATTTACAAATTCAAGCACCTTCTGGATCGTATGGGCGAATTGC 482 Query 10457 TCCCAGATCTGATTTAGCTCTAAATAAATTTATTGATATTGGAGCTGGAGTAATTGACGA 10516 ||| ||||| | ||||| | || || ||||||||| |||| |||||||| | || || Sbjct 483 TCCAAGATCAGGCTTAGCGGTTAAAAATTTTATTGATGTTGGTGCTGGAGTGGTAGATGA 542 Query 10517 AGATTATAGAGGAAATGTGGGAGTAATATTATTTAATCATTCTAATGAAGATTTTATAAT 10576 ||||||| | |||||||| || || | ||||| ||||||||| | | || || || | Sbjct 543 AGATTATCGTGGAAATGTAGGGGTGCTTTTATTCAATCATTCTGAAAAGGACTTCATGGT 602 Query 10577 AAATAGAGGAGATAGAATATCTCAATTAATATGTGAAAAAATTTTATATCC 10627 || | ||| || ||||| |||||||||| ||||||||| | | ||||| Sbjct 603 TAAAAAAGGTGACAGAATTGCTCAATTAATTTGTGAAAAAGTGTATTATCC 653 >seq23123 Length=8273 Score = 109 bits (120), Expect = 8e-19 Identities = 224/331 (68%), Gaps = 9/331 (3%) Strand=Plus/Minus Query 209089 ACACGGATTTCATGTTCATGAATATGGTGATGTGAGTAATGGTTGTACATCAGCAGGAGA 209148 ||| || |||||||| ||||||| |||||| | ||||||||||| || || |||| Sbjct 4650 ACATGGTTTTCATGTACATGAATTTGGTGACAATACAAATGGTTGTACCTCGGCTGGAGC 4591 Query 209149 ACATTTTAATCCATATAATAGACAACATGGAG--ATATTAG-TGATAAAATACATCGTCA 209205 ||||||||||||| || || | ||||| | | || ||| ||| | || Sbjct 4590 ACATTTTAATCCACATGGTAAAACTCATGGTGCCCCAACAGCTGAAGAAA------GACA 4537 Query 209206 TGTTGGTGATTTTGGTAATGTGTATGCAGACGAAAATGGCGTTGCTAATATTGATTTTCA 209265 ||||||||||| || ||||| || | || |||| ||||| || || || | Sbjct 4536 CGTTGGTGATTTAGGCAATGTAACAGCTGGTGATGATGGTGTTGCCAAAATCAATATATC 4477 Query 209266 CGATGATATTATATCATTGTGTGGAACAAATAATATAATAGGAAGAACATTAGTAGTTCA 209325 ||| | | || |||||| |||| | ||| ||| || |||||||||||||| ||||| Sbjct 4476 TGATAAATTAATTTCATTGAGTGGTGAACATAGTATTATTGGAAGAACATTAGTTGTTCA 4417 Query 209326 TGATTCGCCTGATGATTTAGGAAAAACTGATCACCCTTTGAGTAAAACAAGTGGTAATTC 209385 || | ||||||||||| | ||| ||||| ||||||| |||||| | Sbjct 4416 TGCTGATATAGATGATTTAGGGGTTGGGGGTCATGAATTGAGCAAAACAACTGGTAACGC 4357 Query 209386 TGGCGGAAGATTAGGTTGTGGTATTATTGGT 209416 ||| | | | || |||||| |||| ||| Sbjct 4356 TGGTGCCCGTCTTGGATGTGGTGTTATCGGT 4326 >seq202708 Length=1757 Score = 100 bits (110), Expect = 4e-16 Identities = 121/165 (73%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 23997 TTGAATAAAATCTTTGCCTTTTACAAGTTTAACATAATCACATTTATCAAACCATCTTGC 24056 ||||| | | || | ||||| | | ||| | ||||| ||| || | |||||| ||| Sbjct 836 TTGAACATATTCAATACCTTTCATTAATTTTAAATAATGACAATTTCCCAACCATAATGC 895 Query 24057 GTGTTGTATCCAAGGATCATCGTCTGTTTCCCATTTATTTAAACCACCATCACAATAAAA 24116 |||||| ||| |||||||| | | ||||| | || | ||||||| ||||| ||| Sbjct 896 ATGTTGTTCCCATGGATCATCATTTTCATCCCAATCTTTAAGACCACCACCACAACTAAA 955 Query 24117 GCATTTAACTTTATCACTTTTTCCAGTATAAAAGAATCCAGCTTC 24161 ||||||||| ||||| | |||||||||||||| |||||||| Sbjct 956 GCATTTAACACGATCACCAATACCAGTATAAAAGAAACCAGCTTC 1000 >seq69589 Length=1421 Score = 95.1 bits (104), Expect = 2e-14 Identities = 124/172 (72%), Gaps = 0/172 (0%) Strand=Plus/Plus Query 10400 ATTAATAAAAACTGATTTAATTATAGAAATTCCTAAAGGATGTTATGCAAGATTAGCTCC 10459 ||||||||||||||| || | || | || | |||| |||| || ||||||| Sbjct 649 ATTAATAAAAACTGACTTGCAAGTTCAAGTACCAACTGGATCATATGGCAGGGTAGCTCC 708 Query 10460 CAGATCTGATTTAGCTCTAAATAAATTTATTGATATTGGAGCTGGAGTAATTGACGAAGA 10519 | | || | | || | || || |||||||| |||| |||||||| |||| || || Sbjct 709 CCGTTCAGGACTGGCGGTTAAAAATTTTATTGACGTTGGTGCTGGAGTTGTTGATGAGGA 768 Query 10520 TTATAGAGGAAATGTGGGAGTAATATTATTTAATCATTCTAATGAAGATTTT 10571 |||||| || || | ||||| | ||||||||||||||| ||| ||||||| Sbjct 769 TTATAGGGGCAACTTAGGAGTTGTGTTATTTAATCATTCTGATGCAGATTTT 820 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741562402896640