Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_002671.1 Length=15179 Score E Sequences producing significant alignments: (Bits) Value seq92791 113 4e-21 seq46185 98.7 1e-16 seq16551 98.7 1e-16 >seq92791 Length=1590 Score = 113 bits (124), Expect = 4e-21 Identities = 104/132 (79%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 14591 AGATTTGTTCGCTCACTTCTCAGCAATCCAATCTGATGGATTCAAATCACTTGATGAAGG 14650 |||||| ||||||||||| |||||||||||| ||| ||||||||||| | || ||||| Sbjct 731 AGATTTATTCGCTCACTTTTCAGCAATCCAAGGTGACGGATTCAAATCTTTAGACGAAGG 790 Query 14651 TCAAAAAGTTGAATTTGATGTTGAAGAAGGTCAACGTGGTCTTCAAGCAGTCAATATCAC 14710 ||||| || ||||||| | ||||||||||||||||| | |||||| || ||| Sbjct 791 TCAAAGCGTATCATTTGATATCGAAGAAGGTCAACGTGGACCACAAGCAACAAACATCGT 850 Query 14711 AAAAGCATAATT 14722 |||| ||||| Sbjct 851 AAAAAACTAATT 862 >seq46185 Length=1063 Score = 98.7 bits (108), Expect = 1e-16 Identities = 147/207 (71%), Gaps = 4/207 (2%) Strand=Plus/Plus Query 14517 ATTATGGCAAATGGAACAGTAAAATGGTTTAACGCAGATAAAGGATTTGGCTTTAT--CA 14574 ||||||| | | || | ||||||||||||||| ||||| ||||| ||||| || || Sbjct 333 ATTATGGAACAAGGTAAAGTAAAATGGTTTAATGCAGACAAAGGTTTTGGATTCATTGAG 392 Query 14575 CTTCAGAAGAAGGCAAAGATTTGTTCGCTCACTTCTCAGCAATCCAATCTGATGGATTCA 14634 | || ||| || |||| | |||| || |||||||| |||||| || || | || Sbjct 393 CGTC--AAGGTGGAGAAGACGTATTCGTACATTTCTCAGCTATCCAAATCGACGGTTACA 450 Query 14635 AATCACTTGATGAAGGTCAAAAAGTTGAATTTGATGTTGAAGAAGGTCAACGTGGTCTTC 14694 |||| | || ||||| |||| || ||||| || ||| |||| |||||||| || | Sbjct 451 AATCTTTAGACGAAGGACAAAGTGTAACGTTTGAAGTAGAAAAAGGACAACGTGGCCTAC 510 Query 14695 AAGCAGTCAATATCACAAAAGCATAAT 14721 |||| ||| | |||||| |||| Sbjct 511 AAGCTACTAATGTTCAAAAAGCTTAAT 537 >seq16551 Length=9475 Score = 98.7 bits (108), Expect = 1e-16 Identities = 147/207 (71%), Gaps = 4/207 (2%) Strand=Plus/Plus Query 14517 ATTATGGCAAATGGAACAGTAAAATGGTTTAACGCAGATAAAGGATTTGGCTTTAT--CA 14574 ||||||| | | || | ||||||||||||||| ||||| ||||| ||||| || || Sbjct 227 ATTATGGAACAAGGTAAAGTAAAATGGTTTAATGCAGACAAAGGTTTTGGATTCATTGAG 286 Query 14575 CTTCAGAAGAAGGCAAAGATTTGTTCGCTCACTTCTCAGCAATCCAATCTGATGGATTCA 14634 | || ||| || |||| | |||| || |||||||| |||||| || || | || Sbjct 287 CGTC--AAGGTGGAGAAGACGTATTCGTACATTTCTCAGCTATCCAAATCGACGGTTACA 344 Query 14635 AATCACTTGATGAAGGTCAAAAAGTTGAATTTGATGTTGAAGAAGGTCAACGTGGTCTTC 14694 |||| | || ||||| |||| || ||||| || ||| |||| |||||||| || | Sbjct 345 AATCTTTAGACGAAGGACAAAGTGTAACGTTTGAAGTAGAAAAAGGACAACGTGGCCTAC 404 Query 14695 AAGCAGTCAATATCACAAAAGCATAAT 14721 |||| ||| | |||||| |||| Sbjct 405 AAGCTACTAATGTTCAAAAAGCTTAAT 431 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 48336008805482