Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_002703.1 Length=38347 Score E Sequences producing significant alignments: (Bits) Value seq111081 149 2e-31 seq205685 120 7e-23 >seq111081 Length=2465 Score = 149 bits (164), Expect = 2e-31 Identities = 169/224 (75%), Gaps = 2/224 (1%) Strand=Plus/Plus Query 6610 TAGCTGTAAATCGCCAGTTTAAAAATGCGAATGGCGAACGTGAGGCTGATTTAATTAACT 6669 |||| |||| || | |||| ||||| ||||| | ||||| || ||||| ||||||| Sbjct 2237 TAGCGTTAAACCGTAACTTTACGAATGCAAATGGAAATCGTGAAGCAGATTTTATTAACT 2296 Query 6670 GCGTTATTTGGCGACAACAAGCCGAAAATTTAGCTAAGTTTGCTAAAAAAGGAGCTTTGA 6729 | || |||||||| ||| || |||| | ||||| | ||| || ||||| | ||| Sbjct 2297 GTGTGATTTGGCGTAAACCTGCTGAAACAATGGCTAATTATGCCAAGAAAGGCACATTGC 2356 Query 6730 TTGGAATAACTGGACGGATTCAAACAAGGAACTATGAGAACCAACAAGGACAAAAAGTTT 6789 | || ||||||| || || ||||| || ||||||||||| |||||||| ||| |||| Sbjct 2357 TAGGTGTAACTGGTCGTATCCAAACGAGAAACTATGAGAATCAACAAGGTCAACGTGTTT 2416 Query 6790 ATGTTACCGAAGTTGT-TGCAGATACTTTCCAAATGCTAGAAAG 6832 |||| || ||| |||| ||| |||| ||||||| || ||||||| Sbjct 2417 ATGTGACTGAAATTGTCTGC-GATAATTTCCAACTGTTAGAAAG 2459 >seq205685 Length=35797 Score = 120 bits (132), Expect = 7e-23 Identities = 101/124 (81%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 18046 AAATGGATGTCAAAGCATTTGAAAATAAAGCCAAAAAGTATGTTAAAGAAAAAGACTTTT 18105 |||||||||||||||||||||||| || || || |||||||| || ||||||||||| | Sbjct 18482 AAATGGATGTCAAAGCATTTGAAACAAAGGCTAAGAAGTATGTCAAGGAAAAAGACTTCT 18423 Query 18106 CGCACCAAGCAAATCAAGTGTTGAAACTTTATAACTTGACCATGAGAGTGAATCGTTTAG 18165 ||| ||||| |||| || |||||| |||||||| | | |||| | ||||||| |||| Sbjct 18422 CGCCTCAAGCGAATCGAGAATTGAAAATTTATAACCTTAAAATGAAACTGAATCGCTTAG 18363 Query 18166 AACT 18169 | || Sbjct 18362 AGCT 18359 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 122281176967786