Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_002747.1 Length=37667 Score E Sequences producing significant alignments: (Bits) Value seq111081 154 4e-33 seq205685 102 2e-17 >seq111081 Length=2465 Score = 154 bits (170), Expect = 4e-33 Identities = 170/224 (76%), Gaps = 2/224 (1%) Strand=Plus/Plus Query 6259 TAGCTGTAAATCGTCAGTTTAAGAACGCCAATGGAGAGCGAGAAGCTGACTTCATTAATT 6318 |||| |||| ||| | |||| ||| || |||||| | || ||||| || || ||||| | Sbjct 2237 TAGCGTTAAACCGTAACTTTACGAATGCAAATGGAAATCGTGAAGCAGATTTTATTAACT 2296 Query 6319 GTGTTATTTGGCGACAACAAGCCGAAAATTTAGCCAAATTTGCTAAAAAAGGCGCTTTGA 6378 |||| |||||||| ||| || |||| | || || | ||| || |||||| | ||| Sbjct 2297 GTGTGATTTGGCGTAAACCTGCTGAAACAATGGCTAATTATGCCAAGAAAGGCACATTGC 2356 Query 6379 TTGGAATAACTGGACGAATTCAAACACGAAACTATGAGAACCAACAAGGACAAAAAGTTT 6438 | || ||||||| || || ||||| ||||||||||||| |||||||| ||| |||| Sbjct 2357 TAGGTGTAACTGGTCGTATCCAAACGAGAAACTATGAGAATCAACAAGGTCAACGTGTTT 2416 Query 6439 ATGTTACCGAAGTTGT-TGCAGATACTTTCCAAATGCTAGAAAG 6481 |||| || ||| |||| ||| |||| ||||||| || ||||||| Sbjct 2417 ATGTGACTGAAATTGTCTGC-GATAATTTCCAACTGTTAGAAAG 2459 >seq205685 Length=35797 Score = 102 bits (112), Expect = 2e-17 Identities = 97/124 (78%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 16918 AAATGGATGTCAAAGCATTTGCCAATAAAGCTAAGAAATACGTTCAAGAAAAAGACTTTT 16977 ||||||||||||||||||||| | || |||||||| || || | ||||||||||| | Sbjct 18482 AAATGGATGTCAAAGCATTTGAAACAAAGGCTAAGAAGTATGTCAAGGAAAAAGACTTCT 18423 Query 16978 CGAACCAAGCAAATCAAGTGTTGAAACTTTATAACTTGACCATGAGAGTGAATCGTTTAG 17037 || ||||| |||| || |||||| |||||||| | | |||| | ||||||| |||| Sbjct 18422 CGCCTCAAGCGAATCGAGAATTGAAAATTTATAACCTTAAAATGAAACTGAATCGCTTAG 18363 Query 17038 AACT 17041 | || Sbjct 18362 AGCT 18359 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 120110637399066