Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_003038.1 Length=212482 Score E Sequences producing significant alignments: (Bits) Value seq209199 89.7 7e-13 >seq209199 Length=1406 Score = 89.7 bits (98), Expect = 7e-13 Identities = 169/244 (69%), Gaps = 6/244 (2%) Strand=Plus/Plus Query 118135 AAATAAATAATTATATCAGGTTTTAACAATCCATTTTCTGTTTGTTTGCACCATTGAAAA 118194 |||||||| | || ||| ||||| || || ||| ||||| ||| ||||| | | || Sbjct 651 AAATAAATCACTAAATCTGGTTTCAATAAACCAACTTCTGGGGCTTTACACCACTCATAA 710 Query 118195 TCTAAACCTTTAGCAACAGAAAACGCAATTCCAGAATAAGAATATCTATCAATAATGACT 118254 | | |||||||||| | ||| |||| ||| ||||| ||||||||||| | ||| | Sbjct 711 TTCAGACCTTTAGCAGTACTAAAAGCAACTCCTGAATACGAATATCTATCCACAATTAGG 770 Query 118255 GTAATACCATTAAGAA-TATTTGTTTTAATTGTATCGATAATTTCCCATCTATTTTTAGA 118313 | | ||||| |||| || || ||| | || | | | | | |||||||| |||| || Sbjct 771 TTTGTGCCATTTAGAAGTAATTCTTTCATTTCT-TTGTTGAGTTCCCATCGATTTGCCGA 829 Query 118314 AAATAAAATGTGAATATCTTCATCAG--ACAAATAAATTTTTCCTTTTAAATATTGATCT 118371 || | | |||||| ||| |||| || ||||||||| ||||||| || | Sbjct 830 GAAAAGCAGGTGAATGCTTTCGTCAGAAACTTCTAAATTTTT--AGTTAAATACGAATTT 887 Query 118372 ATTA 118375 |||| Sbjct 888 ATTA 891 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 678018695755440