Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_003050.2 Length=40248 Score E Sequences producing significant alignments: (Bits) Value seq111081 118 3e-22 >seq111081 Length=2465 Score = 118 bits (130), Expect = 3e-22 Identities = 176/247 (71%), Gaps = 2/247 (1%) Strand=Plus/Plus Query 6981 GCGGTTGCTACGTTTACTCTTGCTGTAAACCGTCCATTTAAGAACGAGGCTGGAGAGCGT 7040 || || || || ||||| || || |||||||| |||| ||| | |||| | ||| Sbjct 2218 GCAGTGGCAACCTTTACCCTAGCGTTAAACCGTAACTTTACGAATGCAAATGGAAATCGT 2277 Query 7041 GAGGCTGATTTTATCAATTGCGTTATCTGGAGACAGTTAGCTGAAAATCTTGCTAATTGG 7100 || || |||||||| || || || || ||| | | ||||||| | ||||||| Sbjct 2278 GAAGCAGATTTTATTAACTGTGTGATTTGGCGTAAACCTGCTGAAACAATGGCTAATTAT 2337 Query 7101 GCTAAAAAAGGCTCTCTTATCGGAGTTACAGGAGTAATTCAAACACGTAGCTATGATAAC 7160 || || |||||| | | | || || || || || ||||| | | |||||| || Sbjct 2338 GCCAAGAAAGGCACATTGCTAGGTGTAACTGGTCGTATCCAAACGAGAAACTATGAGAAT 2397 Query 7161 CAGCAAGGTCAACGTGTTTATGTCACAGAAGTTGT-TGCCAGTAATTTTCAACTGTTGGA 7219 || |||||||||||||||||||| || ||| |||| ||| | |||||| |||||||| || Sbjct 2398 CAACAAGGTCAACGTGTTTATGTGACTGAAATTGTCTGCGA-TAATTTCCAACTGTTAGA 2456 Query 7220 AAGCCGT 7226 ||| ||| Sbjct 2457 AAGTCGT 2463 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 128349111850340