Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq210017 324 1e-83 seq105373 170 2e-37 >seq210017 Length=1697 Score = 324 bits (358), Expect = 1e-83 Identities = 1020/1571 (65%), Gaps = 23/1571 (1%) Strand=Plus/Plus Query 22103 GTCTTGTCCACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATG 22162 || || || ||||| ||||| || || ||||| || ||||| || | | ||||||||| Sbjct 37 GTTTTATCTACTGTGAACTGAATAGCATTTGCAGCAGGTTTTGTTCTTAAATAATACATT 96 Query 22163 CCCGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAACTC 22222 || || || || || ||||| || |||||||| || || |||||||| ||||| || Sbjct 97 CCAGTTTTTAGTCCAGCTTTCCAAGCATAAAAATGAATTGAAGTCAATTTACCATAGTTC 156 Query 22223 GGCAAGTCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGCG 22282 || ||| | | ||| || || ||||| ||||| ||||| ||||| ||||| Sbjct 157 GGTTCAGCCACATGAATATTAAATGATTGACTTTGATCAATAAAAGCTCCACGATCACAA 216 Query 22283 GCCATATTTATCAATGTACGCATC---GACATTTCCCATACGGTCTTGTACAGTTGCCTG 22339 || || ||| ||||| | | || ||||||||||| ||||| |||| | || Sbjct 217 GCATAATCTAT---TGTACTCCTAACAGATATTTCCCATACCGTCTTATACAAATCTCTT 273 Query 22340 ATCTCTAACGGTATCGATTCGATCCTCTGGACGGACCCGTTATTGTGTATGATCAAATTT 22399 || | | || ||| ||| || | || | ||||| ||| ||||| || ||| Sbjct 274 ATATTTTGAGGAATCTTTTCAATATTTTGAATAGACCCACGATTTGAAATGATTAAGTTT 333 Query 22400 TTAATCGTATCGTTCCACAAACCGATGGCGGTCAAATCTTTGACCAGATGACGGTTCACC 22459 || || ||| | ||||||| | | | || | |||||| | || |||| | || || Sbjct 334 TTCATATCATCATCCCACAAATCTAGTTCTGTAAGATCTTTTAACAAATGATGATTAACA 393 Query 22460 ACTTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAA 22519 | ||| || || || || || || ||||| | || || || |||||| | ||||| || Sbjct 394 ATTTGGAATTCACCAGATAAAACCCGGCGATTATATATATTTGATGTGTATGGTTCAAAT 453 Query 22520 GATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGC 22579 ||||||||||| |||| || || ||||| || || || ||||| || || | | || | Sbjct 454 GATTCATTGTTACCCAAAATTTGTGCGGTTGATGCTGTTGGCATTGGTGCAATTAATAAC 513 Query 22580 GAGTTTCTCAAGCCGTGCTTTGAAATTTTACTCTTGAGCATCGACCAGTCCCACAGATCG 22639 || |||| | || || | | ||||||| ||| | ||||| ||||| | || Sbjct 514 GAATTTCGAACACCATGTTGAGCAATTTTATCCTTTAATTCAGACCAATCCCATAAATTT 573 Query 22640 GACGGCGTCACATTGTCCCACATATCGTATTGCAACACGCCGCGACTCGCCGGGCTGCCT 22699 | || | || | |||||| || ||||| || | || ||| | ||| |||| Sbjct 574 GTTGG---GATTTTATTCCACATGTCATATTGTAAAATACCCTTACTTACAGGGGAGCCT 630 Query 22700 TCGTACGTTTCGTACGGACCATATATCGCG-GCAAGTTCGCAGCTCGCCTCCAACGCGCC 22758 || || ||||| || ||||| || || | || | ||| || || || || || ||||| Sbjct 631 TCATATGTTTCATAAGGACCCAAT-TCTTGAGCTAATTCACAACTAGCTTCTAAGGCGCC 689 Query 22759 GTAATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCGGCGGCGACGCTTTCGTACGG 22818 || || ||||| || || |||| | ||||||| || | |||||| || || Sbjct 690 ATAGTAAATAGTTTCAAAAATTTGTTGGTTCAATAATTTAGCTTCTTTGCTTTCATAAGG 749 Query 22819 CATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGATCGGTCGGTT 22878 | |||||| | | || || || || | ||||| || || || || || |||| | Sbjct 750 AAAACGCATTAGTATAAAAGCATCAGCAAGTCCCTGTACCCCAATTCCAATTGGTCTATG 809 Query 22879 TTTCAGATTCGACACTTTTGCCTCGGGCAAAGGATACCAATTCGAATCGATTGTTCTGTT 22938 | ||| || ||| || ||||| | |||||| |||| ||| || || | || Sbjct 810 CCGTAAATTTGATTTTTTAGCTTCGGGGACAGGATAATAATTTACATCTATAATTTTATT 869 Query 22939 CAAGTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGTCGTAAACGCCCGA 22998 || ||| | || | |||||| | | | ||||| ||| | | Sbjct 870 TAAATTTTTCGTTATAATTTTTGAAACATGTTTTAATTTATTGAAGTC--AAAGGTTTTA 927 Query 22999 T--TGTACAACAAACTTGTTGACGGCGATCGAGGCAAGATTGCATACGGCCACCTCGTCT 23056 | || ||| ||| | || | || || || || | ||| ||||| || | || ||| Sbjct 928 TCCTGAGAAACGAACATATTAAGAGCTATAGACGCCAAATTACATACAGCAATTTCATCT 987 Query 23057 TTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTGCCCAAATTG 23116 || | ||||| |||||||| || |||| ||| || || || || |||| ||| Sbjct 988 GGCGAAGAATACTCCACAATTTCAGTGCATAAATTACTGCAACGAATTGTTCCCACATTT 1047 Query 23117 CTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCG 23176 ||| |||||||||| ||| || | ||| ||||| |||||||| || || || ||||| Sbjct 1048 TGCTGATTGCTTTTTCTATTACAAGCATCTTTGTATAGCATGTAAGGTGTTCCTGTCTCA 1107 Query 23177 ACCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGTGAACACGTCGCACGTACCTG 23236 ||||| ||||| || || || ||| | || || || | | | || Sbjct 1108 ACCTGTGACTCAATAATTGCAAACCAAAGTGTTTGTGCCTTTATTTTTTTATTAGCTCTA 1167 Query 23237 CCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGTA-ACAGTCG-GCCA 23294 || |||| || || || || || | || ||||| |||| | ||| ||| | | Sbjct 1168 CCCTCTTTTTCATATTTAGTATATAATTCTTCGAATTCCTCACCCCATACA-TCGTGTAA 1226 Query 23295 GGCCGGGCGATTGCATCGGACACATGAGACTCCA--CATTGAGTCATTTTCAACGCGTCT 23352 | |||| || | || ||||| | | ||| ||| ||| |||||| | | | Sbjct 1227 ACCTGGGCACTTATGT-GGGCACATTAAAGACCATTCAT--CGTCGGATTCAACTCTTTT 1283 Query 23353 CATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTT 23412 |||||| | ||| |||||||| | ||| || ||||| || | ||| || |||||||| Sbjct 1284 CATAAACAAATCTGGTATCCACAAAGCATAAAACAGATCTCTGGCTCGTGTTTCCTCTTT 1343 Query 23413 GCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTA 23472 || || ||||| || || || ||||| || | | || | |||||| || || || || Sbjct 1344 TCCAGTATTCTTCTTTAAGTCTAAAAATTCAAGTATATCAGAATGCCATGGTTCTAGATA 1403 Query 23473 AACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTT 23532 | ||||| || || || || ||||| || || || || ||||| || || || || Sbjct 1404 TATTGCAAAAGCTCCTGGCCTTTTATTTCCACCTTGGTCAACGTATCGAGCAACATTATT 1463 Query 23533 GTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCACACTCGA 23592 | | ||||| | ||| || || | ||||| || | || | || || | | | Sbjct 1464 GAAAACTCTCAACATAGGTACTAAGCCGTTAGAAACCCCATTTGTACCAGCAATTGTTGT 1523 Query 23593 ACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATATCAT 23652 ||| |||| |||| ||||| | ||||| ||||| || | || || || ||||| Sbjct 1524 TCCTGTTGCACGAATACAATGAACATTTAAACCAATGCCACCAGCTGACTTTGAAATCAT 1583 Query 23653 CGCGCATTGTT 23663 || || |||| Sbjct 1584 TGCACACTGTT 1594 >seq105373 Length=2707 Score = 170 bits (188), Expect = 2e-37 Identities = 788/1240 (64%), Gaps = 25/1240 (2%) Strand=Plus/Plus Query 22433 AAATCTTTGACCAGATGACGGTTCACCACTTGAAACTCGCCGGACAAGACGCGGCGTTGG 22492 |||||||| | | ||| | || || |||||||| || || || | || || | | | Sbjct 48 AAATCTTTAATTAAGTGATGATTAACTACTTGAAATTCACCAGAAAGAACTCGTCTATTG 107 Query 22493 TAAATGTTGGATGTGAACGGTTCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAA 22552 || || || || || |||| || |||||||| || || || | || || || || || Sbjct 108 TATATATTTGAAGTATACGGCTCAAAAGATTCGTTATTACCTAAAATTTGTGCAGTAGAT 167 Query 22553 GCGGTCGGCATCGGCGCCAACAGTAGCGAGTTTCTCAAGCCGTGCTTTGAAATTTTA-CT 22611 ||||| ||||| || || | || ||| || || | | ||| || || | ||||| || Sbjct 168 GCGGTTGGCATAGGGGCAATCAATAGTGAATTCCGGACGCCATGTTTAGCGATTTTTTCT 227 Query 22612 CTTGAGCATC-GACCAGTCCCACAGATCGGACGGCGTCACATTGTCCCACATATCGTATT 22670 || || || ||||| ||||||| || | || || ||| ||||||||| || | Sbjct 228 TTTAAG--TCAGACCAATCCCACAAGTCCGTGGGTGTTTTATT---CCACATATCATACT 282 Query 22671 GCAACACGCCGCGACTCGCCGGGCTGCCTTCGTACGTTTCGTACGGACCATATATCGCGG 22730 |||| | || ||| | || || | || ||||| || | ||||||| | | | Sbjct 283 GCAAAATACCTTTACTTACAGGCGAACCGTTATAGGTTTCATATGAACCATATTTTTCCG 342 Query 22731 CAAGTTCGCAGCTCGCCTCCAACGCGCCGTAATATATAGTCTCGAAGATTTTCTTGTTCA 22790 | | || || || || ||||| || ||||| || || || || || || | | |||| Sbjct 343 CTAACTCACAACTGGCTTCCAAAGCACCGTAGTAAATTGTTTCAAAAATCTGTTGATTCA 402 Query 22791 ATTCGGCGGCGGCGACGCTTTCGTACGGCATACGCATCATCACGAACGCGTCCGCCATAC 22850 || || | ||||| || || ||||| | | || |||||||||| | Sbjct 403 ATAATCTAGCTTCTTTACTTTCATAAGGATAACGCAATAGGATAAAAGCGTCCGCCAATC 462 Query 22851 CCTGAACGCCTATACCGATCGGTCGGTTTTTCAGATTCGACACTTTTGCCTCGGGCAAAG 22910 | ||||| || || || || ||||| | | | ||| || ||| ||||| || | | Sbjct 463 CTTGAACTCCAATTCCAATTGGTCGATGCCTAAAATTAGATTTTTTAGCCTCTGGAAGTG 522 Query 22911 GATACCAATTCGAATCGATTGTTCTGTTCAAGTTTCTGGTCACAATTTTCGTTATNNNNN 22970 | || | || ||| || || | ||||| ||||| || | |||||| | | Sbjct 523 GGTAATAGTTTACATCTATAATTTTATTCAAATTTCTTGTTATAATTTTGGAAACATTTT 582 Query 22971 NNNNNNNNTCAAAGTCGTAAACGCCCGATT--GTACAACAAACTTGTTGACGGCGATCGA 23028 ||| || |||| | ||| ||| |||||| | || | || || || Sbjct 583 TCAATTCAATAAAATC--AAACTTTCCATTTGGTAACACAAACATATTTAGAGCAATAGA 640 Query 23029 GGCAAGATTGCATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAG 23088 || | |||||| ||||| | || ||| | | || || |||||||| ||||| | Sbjct 641 TGCCAAATTGCAAACGGCAATTTCATCTGAACAAGAATATTCCACAATTTCTGTACACAA 700 Query 23089 ATTGCTACACTTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTT 23148 |||||| || || || || | ||| | || || ||||| || ||||| | || || Sbjct 701 ATTGCTGCAACGAATTGTTCCAAGATTTTTTTGATTACTTTTACGGTTGCAAGTGTCTTT 760 Query 23149 GTAGAGCATGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATAGT 23208 ||| | || || || | || || || || || | || | || ||||| | Sbjct 761 GTACATTATATATGGATTACCAGTTTCAACTTGAGCTTCAACTATACTAAACCACAACGC 820 Query 23209 CTGAGCGTGAACACGTCGCACGTA--CCTGCCTTCTTCCTCGTACTTTTGGTACAACGCG 23266 |||| | ||| | ||| ||| ||||| | || || |||| ||||| Sbjct 821 TCGAGCCTTAACTATTTTA--GTAGCCCTACCTTCGTTTTCATATTTTTCGTACAGATTT 878 Query 23267 TCAAATTCGGCACCGTA-ACAGTCGGCCAGGCCGGGCGA-TTGCATCGGACACATGAGAC 23324 | ||||| |||| | ||| ||| || || || | ||| | |||||||| | | Sbjct 879 TTGAATTCATCACCCCAGACA-TCGAACAAACCCGGACACTTGTGT-GGACACATTAAAG 936 Query 23325 TCCACATTGAGTCATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGA 23384 ||| | |||||| | |||| |||||| | ||| || ||||||| | |||| Sbjct 937 ACCAATCACCATTATTTTCTAAGCGTTCCATAAATAAATCTGGAATCCATAACCCATAGA 996 Query 23385 ACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCA 23444 | || || | || || | || ||||| ||||| || ||||||||||| ||||| || | Sbjct 997 AGAGATCTCTTGCACGAATTTCTTCTTTTCCGGTATTTTTTTTCAAATCTAAAAATTCAA 1056 Query 23445 ACACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGC 23504 | | || ||||||||||| || | |||| ||||| | || ||||| ||||| | | Sbjct 1057 ATATATCTGCATGCCACGGTTCTAAATAAATTGCAAATGAACCGGGTCTTTTATTAACAC 1116 Query 23505 CCTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGG 23564 | || | || | | || || ||| | || | |||||| || || | ||||| | Sbjct 1117 CTTGTCCAACAAATCTTGCTAAATTATTGAATACACGTAGCATTGGAACAATTCCGTTTG 1176 Query 23565 ACGCGCCGCCTACGCCCGCCACACTCGAA---CCTTTTGCTCGAACGTTGTGAACGTGGA 23621 || ||| || || | || | ||| |||||||| || | | |||| | | Sbjct 1177 ACTTTCCGTCTGTTCCAG---CAATTGAAGTCCCTTTTGCCCGTATGCAATGAATATTTA 1233 Query 23622 AACCTATGCCTCCGCCCGATTTCGATATCATCGCGCATTG 23661 |||| || || || | ||||| || || |||||||||| Sbjct 1234 AACCAATTCCACCAGCAGATTTTGAAATTCTCGCGCATTG 1273 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 444588924770640