Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_003157.5 Length=43106 Score E Sequences producing significant alignments: (Bits) Value seq111081 147 6e-31 >seq111081 Length=2465 Score = 147 bits (162), Expect = 6e-31 Identities = 183/248 (74%), Gaps = 2/248 (1%) Strand=Plus/Plus Query 9734 AGCTGTAGCTACGTTCACACTTGCGGTAAACCGCAGATTTAAAGAGCAAAACGGGGAGAG 9793 ||| || || || || || || ||| ||||||| | |||| | ||| || | | Sbjct 2217 AGCAGTGGCAACCTTTACCCTAGCGTTAAACCGTAACTTTACGAATGCAAATGGAAATCG 2276 Query 9794 AGAAGCAGATTTCATTAACTGTGTTATCTGGCGACAGTCTGCTGAAAATTTAGCCAACTG 9853 ||||||||||| ||||||||||| || ||||| | ||||||||| | || || | Sbjct 2277 TGAAGCAGATTTTATTAACTGTGTGATTTGGCGTAAACCTGCTGAAACAATGGCTAATTA 2336 Query 9854 GGCTAAAAAAGGTGCTTTGATCGGAGTTACGGGTCGTATTCAGACACGTAACTACGAAAA 9913 || || ||||| | ||| | || || || |||||||| || || | ||||| || || Sbjct 2337 TGCCAAGAAAGGCACATTGCTAGGTGTAACTGGTCGTATCCAAACGAGAAACTATGAGAA 2396 Query 9914 CCAACAAGGACAACGTGTCTATGTAACAGAAGTTGT-TGCAGATAATTTCCAAATGTTGG 9972 |||||||| |||||||| ||||| || ||| |||| ||| |||||||||||| |||| | Sbjct 2397 TCAACAAGGTCAACGTGTTTATGTGACTGAAATTGTCTGC-GATAATTTCCAACTGTTAG 2455 Query 9973 AAAGTCGT 9980 |||||||| Sbjct 2456 AAAGTCGT 2463 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 137471761978872