Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq139863 159 7e-34 >seq139863 Length=2592 Score = 159 bits (176), Expect = 7e-34 Identities = 256/366 (70%), Gaps = 5/366 (1%) Strand=Plus/Minus Query 101909 GAACTAATTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCC 101968 |||| ||| |||| ||||| |||||||||||||| |||||||||||| || ||||| Sbjct 1639 GAACGTATTATTGCTTTTGCAGCAGTTGAAGGAATATTCTTTAGTGGTAGTTTTGCATCA 1580 Query 101969 ATTTTCTGGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATT 102028 || || ||| | || || | || || |||| || | || | || ||||| | ||| Sbjct 1579 ATATTTTGGTTAAAAAAACGTGGCCTTATGCCAGGATTAACATTTTCAAATGAACTAATT 1520 Query 102029 TCTAGGGACGAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTT 102088 || || || ||||| | ||| | || |||||||| | |||| ||| | ||| | Sbjct 1519 TCAAGAGATGAAGGATTACATTGTGATTTTGCATGTTTAATGTTTAAACA---TTTAATA 1463 Query 102089 GATACCCCATCAAGAGAAAGGATTCTTGAAATTGTCACTGAAGCCGTCCGAATTGAACAA 102148 | | ||| | |||||| ||| |||||||| | ||||||| || |||||||||| Sbjct 1462 CAAAAACCAAGTAAAGAAAGAATTATTGAAATTATATCTGAAGCAGTGAAAATTGAACAA 1403 Query 102149 GAATTTCTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGC 102208 |||||| | || | | | ||||| || ||| | || ||||| ||||| || ||| Sbjct 1402 GAATTTTTAACTGACGCATTACCTGTAAATTTAATTGGTATGAATTGCAATTTAATGTCG 1343 Query 102209 CAGTACATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGGACTAGAAAAGCACTAT 102268 || || ||||||||||| || || | ||||| ||| ||||| | || || | || Sbjct 1342 CAATATATTGAATTTGTTGCTGACCGATTATTGAGAGAATTGGGAGTTGATAA--AGTAA 1285 Query 102269 AATGTT 102274 |||||| Sbjct 1284 AATGTT 1279 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 986904702247735