Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq210017 453 1e-122 seq139863 358 8e-94 seq105373 356 3e-93 seq1919 98.7 1e-15 >seq210017 Length=1697 Score = 453 bits (502), Expect = 1e-122 Identities = 995/1480 (67%), Gaps = 22/1480 (1%) Strand=Plus/Plus Query 62037 TTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCC 62096 || || | |||||| ||||| | | | || ||||| || | || ||| |||||||| Sbjct 40 TTATCTACTGTGAACTGAATAGCATTTGCAGCAGGTTTTGTTCTTAAATAATACATTCCA 99 Query 62097 GTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGA 62156 |||||||| || |||| | |||||||| || || | ||| ||| |||| Sbjct 100 GTTTTTAGTCCAGCTTTCCAAGCATAAAAATGAATTGAAGTCAATTTACCATAGTTCGGT 159 Query 62157 TCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCC 62216 || || | ||| ||||| | |||||||||||||| || || ||||| | || ||| Sbjct 160 TCAGCCACATGAATATTAAATGATTGACTTTGATCAATAAAAGCTCCACGATCACAAGCA 219 Query 62217 ATTTTTATGATCGTCTTTTGTGCAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATC 62275 | ||| | || | | |||||||| | || ||||| || || |||| ||| Sbjct 220 TAATCTATTGTACTCCTAACAGATATTTCCCATACCGTCTTATACAAATCTCTTA-TATT 278 Query 62276 TTCTGGAAGGTTTG---TATTCTGAATGGATCCACCATCTACCATAATCCTATTCTTGAT 62332 || |||| ||| |||| ||||| || |||| || | || || || || || Sbjct 279 TTGAGGAATCTTTTCAATATTTTGAATAGACCCACGATTTGAAATGATTAAGTTTTTCAT 338 Query 62333 CTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGGTTAACTACTTG 62392 ||||||| ||| || | | || || | | || | | | ||| | ||||| | ||| Sbjct 339 ATCATCATCCCACAAATCTAGTTCTGTAAGATCTTTTAACAAATGATGATTAACAATTTG 398 Query 62393 GAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTC 62452 |||||| ||||| || || | ||| | || ||||| || || ||||| | || || Sbjct 399 GAATTCACCAGATAAAACCCGGCGATTATATATATTTGATGTGTATGGTTCAAATGATTC 458 Query 62453 ATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATT 62512 ||| || ||||||||||| || |||||||| || ||||| ||||| | ||||| ||| Sbjct 459 ATTGTTACCCAAAATTTGTGCGGTTGATGCTGTTGGCATTGGTGCAATTAATAACGAATT 518 Query 62513 TCTAAGACCGTATGTTCTG--ATTTTATCTTTTAGATGTTCCCAATTCCAAAGATCCGAC 62570 || || ||| ||||| | |||||||| |||| | ||||| ||| | || | Sbjct 519 TCGAACACC--ATGTTGAGCAATTTTATCCTTTAATTCAGACCAATCCCATAAATTTGTT 576 Query 62571 GGTACAACANNNNNNNNNNNATATTGTAGAATACCGTTACTGGCGTACGATCCTACATAT 62630 || | | |||||||| |||||| ||||| | || ||| ||||| Sbjct 577 GGGATTTTATTCCACATGTCATATTGTAAAATACCCTTACTTACAGGGGAGCCTTCATAT 636 Query 62631 GTATCATATGGTCCTTCCTTCTCAGCTAGTTTACAACTCGCCTCTAATGCACCGTAATAA 62690 || ||||| || || | | ||||| || |||||| || ||||| || || || ||| Sbjct 637 GTTTCATAAGGACCCAATTCTTGAGCTAATTCACAACTAGCTTCTAAGGCGCCATAGTAA 696 Query 62691 ATGGTTTCAAAGATCTTCTTATTTAGATCTTGT-GCTTCCGGGCTATCAAATGGATAATT 62749 || |||||||| || || || || || | | ||||| ||| ||| | ||| || Sbjct 697 ATAGTTTCAAAAAT-TTGTTGGTTCAATAATTTAGCTTCTTTGCTTTCATAAGGAAAACG 755 Query 62750 TAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTT 62809 | || ||||| || || || | ||| || || ||||| || || |||||||| | Sbjct 756 CATTAGTATAAAAGCATCAGCAAGTCCCTGTACCCCAATTCCAATTGGTCTATGCCGTAA 815 Query 62810 ATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATT 62869 ||| || ||| |||||| || | |||||||||||| | ||||||||||||||| | ||| Sbjct 816 ATTTGATTTTTTAGCTTCGGGGACAGGATAATAATTTACATCTATAATTTTATTTAAATT 875 Query 62870 TCTG---ACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGCCCATCTAT 62926 | | | |||| ||||| |||| || | ||| || ||||| ||| Sbjct 876 TTTCGTTATAATT--TTTGAA-ACATGTTTTAATTTATTGAAGTCAAAGGTTTTATCCTG 932 Query 62927 T---ACAAACATGTTCAATGCAACAGATGCCAGATTACACACGGCTACCTCATTAGCATC 62983 || ||||| || | || | ||| |||| |||||| || || | |||| | Sbjct 933 AGAAACGAACATATTAAGAGCTATAGACGCCAAATTACATACAGCAATTTCATCTGGCGA 992 Query 62984 CGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTG 63043 | ||| | | || |||||||| | |||||| || || ||||| | |||||| || Sbjct 993 AGAATACTCCACAATTTCAGTGCATAAATTACTGCAACGAATTGTTCCCACATTTTGCTG 1052 Query 63044 ATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTG 63103 ||| || ||| | ||||| ||||| || || || ||| | || || || || |||| ||| Sbjct 1053 ATTGCTTTTTCTATTACAAGCATCTTTGTATAGCATGTAAGGTGTTCCTGTCTCAACCTG 1112 Query 63104 AGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCTCCTTTC 63163 || || ||||| || ||| | | | ||||||||| | || ||| | || Sbjct 1113 TGACTCAATAATTGCAAACCAAAGTGTTTGTGCCTTTATTTTTTTATTAGCTCTACCCTC 1172 Query 63164 TCTTTCGTATAGAGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCTAGG 63223 | |||| ||| |||||| ||| |||||| || || ||||| |||| || || | || Sbjct 1173 TTTTTCATATTTAGTATATAATTCTTCGAATTCCTCACCCCATACATCGTGTAAACCTGG 1232 Query 63224 ACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAG 63283 || | || || ||||| || ||||| || |||| | |||| ||||||||| | Sbjct 1233 GCACTTATGTGGGCACATTAAAGACCATTCATCGTCGGATTCAACTCTTTTCATAAACAA 1292 Query 63284 ATCAGGAATCCAAAGAGCTATAAATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATT 63343 ||| || ||||| | ||| ||| |||||||| | || |||||| ||||| ||||| Sbjct 1293 ATCTGGTATCCACAAAGCATAAAACAGATCTCTGGCTCGTGTTTCCTCTTTTCCAGTATT 1352 Query 63344 CTT-TTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCA 63402 ||| |||||| || | || | | |||||||||||||| ||||| | ||||| || | Sbjct 1353 CTTCTTTAAG-TCTAAAAATTCAAGTATATCAGAATGCCATGGTTCTAGATATATTGCAA 1411 Query 63403 TAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTC 63462 | |||| |||| ||| ||||| || || || | ||||| ||| ||||| |||||| Sbjct 1412 AAGCTCCTGGCCTTTTATTTCCACCTTGGTCAACGTATCGAGCAACATTATTGAAAACTC 1471 Query 63463 TCAACATTGGAATAATACCGTTTGATATACCATTGGTACC 63502 ||||||| || | | ||||| || | ||||| ||||| Sbjct 1472 TCAACATAGGTACTAAGCCGTTAGAAACCCCATTTGTACC 1511 >seq139863 Length=2592 Score = 358 bits (396), Expect = 8e-94 Identities = 528/743 (71%), Gaps = 5/743 (1%) Strand=Plus/Plus Query 33374 AACATTGTAAAtttttttAAATCCCAATTCAGAAATCAATCTATCTGCGACGAATTCTAT 33433 |||||| || ||| | || ||||||||| | |||| || || || ||||| || Sbjct 1279 AACATTTTAC--TTTATCAACTCCCAATTCTCTCAATAATCGGTCAGCAACAAATTCAAT 1336 Query 33434 ATATGTTTTCATCATTTCACAATTCATTCCTATGAGTTTAACTGGAAGAGCCACAGTAAG 33493 |||| ||| | | |||||||| || || | || || || | || |||| | Sbjct 1337 ATATTGCGACATTAAATTGCAATTCATACCAATTAAATTTACAGGTAATGCGTCAGTTAA 1396 Query 33494 AAATTCTTGTTCAATGGATACCGCATTTGTTATAATAAATCTAACGGTTTCTTCACTCGG 33553 ||||||||||||||| || || | | |||||| ||| |||||| ||| || Sbjct 1397 AAATTCTTGTTCAATTTTCACTGCTTCAGATATAATTTCAATAATTCTTTCTTTACTTGG 1456 Query 33554 TGGATGTAATAAATGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCT 33613 | |||| ||||||||||||||| |||||||| ||||| || || | || || ||||| Sbjct 1457 TTTTTGTATTAAATGTTTAAACATTAAACATGCAAAATCACAATGTAATCCTTCATCTCT 1516 Query 33614 ACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAA 33673 ||||| ||| || ||||| || | ||| ||||| |||||||| ||||| | |||||| Sbjct 1517 TGAAATTAGTTCATTTGAAAATGTTAATCCTGGCATAAGGCCACGTTTTTTTAACCAAAA 1576 Query 33674 TATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCT 33733 ||| || || || || |||||| |||||||| ||||| ||||| ||||||| | Sbjct 1577 TATTGATGCAAAACTACCACTAAAGAATATTCCTTCAACTGCTGCAAAAGCAATAATACG 1636 Query 33734 CTCTCCATAACCGGC-GCTGT-CATG-TATCCACTTTTGAGCCCAATCGGCCTTCTTTTT 33790 ||||||||| || | | | | || |||||| | | |||||||| || || ||||| Sbjct 1637 TTCTCCATAATTAGCTGATTTACTTGTTATCCAATCTAATGCCCAATCAGCTTTTTTTTT 1696 Query 33791 TACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAAC 33850 ||||| || | ||||| || |||||||| || | | | |||| || ||| || | Sbjct 1697 AACACATGGTAATGTTTCAATTGCATTAAAAAGGAAATCTCTTTCTTTTGGATCCTTTAT 1756 Query 33851 ATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAA 33910 ||| ||||| || |||| || |||||||| ||||||| ||||| || || || ||||| Sbjct 1757 ATATGTATCAATTAAAATGCTGTACATTTCGGAATGAACATTTTCCATAGCTATTTGAAA 1816 Query 33911 TCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTCTGCTAAATT 33970 ||| || ||||| | || || || | || |||||| || ||| ||||| | | ||| Sbjct 1817 TCCATAAAAACAACGCGCTTCAGTTACTTGAACTTCTTGACTAAAACGTTCAACAAGATT 1876 Query 33971 TTCATTCACTATTCCATCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTT 34030 ||| || ||||| ||||| || |||||||| || || |||||| ||| |||| Sbjct 1877 TTCGTTAACTATACCATCTGAAGCAGCAAAAAATGCTAAAACATGTGATATGAAATGACG 1936 Query 34031 TTCGTCTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCAC 34090 ||| | | |||| ||| ||||| || | ||||| || |||| ||| ||||| || || Sbjct 1937 TTCTCCAGAAGTTAATTTGTTCCAGTCCGTCATATCCTTTGATAAATCAACTTCCTCAAC 1996 Query 34091 TGTCCAAAATGATGCCTCTGCCT 34113 |||||||| ||||| || |||| Sbjct 1997 CGTCCAAAAAGATGCTTCAGCCT 2019 >seq105373 Length=2707 Score = 356 bits (394), Expect = 3e-93 Identities = 763/1136 (67%), Gaps = 11/1136 (1%) Strand=Plus/Plus Query 62359 TTAAAACTCTAAGGAGATGCGGGTTAACTACTTGGAATTCTCCAGACAATACTCTCCGAG 62418 ||||| || ||| | || | ||||||||||| ||||| ||||| | |||| | | Sbjct 46 TTAAATCTTTAATTAAGTGATGATTAACTACTTGAAATTCACCAGAAAGAACTCGTCTAT 105 Query 62419 TGTAAATATTACTGGTATACGGTTCCACCGACTCATTATTTCCCAAAATTTGAGCAGTTG 62478 |||| ||||| |||||||| || | || || ||||| || |||||||| ||||| | Sbjct 106 TGTATATATTTGAAGTATACGGCTCAAAAGATTCGTTATTACCTAAAATTTGTGCAGTAG 165 Query 62479 ATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTGATTTTAT 62538 |||| || |||||||| || | ||||| ||| | | || | | | |||||| | Sbjct 166 ATGCGGTTGGCATAGGGGCAATCAATAGTGAATTCCGGACGCCATGTTTAGCGATTTTTT 225 Query 62539 CTTTTAGATGTTCCCAATTCCAAAGATCCGACGGTACAACANNNNNNNNNNNATATTGTA 62598 |||||| | ||||| ||| | |||| ||| | ||| || | Sbjct 226 CTTTTAAGTCAGACCAATCCCACAAGTCCGTGGGTGTTTTATTCCACATATCATACTGCA 285 Query 62599 GAATACCGTTACTGGCGTACGATCCTACATATGTATCATATGGTCCTTCCTTCTCAGCTA 62658 |||||| ||||| | ||| || ||| || ||||||| || | || || |||| Sbjct 286 AAATACCTTTACTTACAGGCGAACCGTTATAGGTTTCATATGAACCATATTTTTCCGCTA 345 Query 62659 GTTTACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCAAAGATCTTCTTATTTAGAT 62718 | |||||| || || || |||||||| ||||| |||||||| |||| | ||| | || Sbjct 346 ACTCACAACTGGCTTCCAAAGCACCGTAGTAAATTGTTTCAAAAATCTGTTGATTCA-AT 404 Query 62719 CTTGT-GCTTCCGGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCCGCTAATCCT 62777 | | ||||| || ||| | |||||| || || ||||| |||||||| |||||| Sbjct 405 AATCTAGCTTCTTTACTTTCATAAGGATAACGCAATAGGATAAAAGCGTCCGCCAATCCT 464 Query 62778 TGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGA 62837 ||||| ||||| || || |||| ||| || |||||| ||| ||| ||||||| || Sbjct 465 TGAACTCCAATTCCAATTGGTCGATGCCTAAAATTAGATTTTTTAGCCTCTGGAAGTGGG 524 Query 62838 TAATAATTAATATCTATAATTTTATTGAGATTTCTGACAATTACTTTGACCACATCCTTC 62897 ||||| || | ||||||||||||||| | |||||| || | |||| |||| ||| Sbjct 525 TAATAGTTTACATCTATAATTTTATTCAAATTTCTTGTTATAATTTTGGAAACATTTTTC 584 Query 62898 AGTTTGAGAAAATCAAATCGCCCAT---CTATTACAAACATGTTCAATGCAACAGATGCC 62954 | || | ||||||||| |||| || |||||||| || | |||| ||||||| Sbjct 585 AATTCAATAAAATCAAACTTTCCATTTGGTAACACAAACATATTTAGAGCAATAGATGCC 644 Query 62955 AGATTACACACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTA 63014 | ||| || ||||| | |||| | | | ||||| | || || || || | ||| Sbjct 645 AAATTGCAAACGGCAATTTCATCTGAACAAGAATATTCCACAATTTCTGTACACAAATTG 704 Query 63015 CTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAA 63074 || || || ||||| | ||||| ||||||||| || ||| || | || || || Sbjct 705 CTGCAACGAATTGTTCCAAGATTTTTTTGATTACTTTTACGGTTGCAAGTGTCTTTGTAC 764 Query 63075 AGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGA 63134 | || ||||| |||||||||||| |||| ||| | || ||| | ||||| Sbjct 765 ATTATATATGGATTACCAGTTTCAACTTGAGCTTCAACTATACTAAACCACAACGCTCGA 824 Query 63135 GCCTTTATTATAGATTTGTA--TCTCCTTTCTCTTTCGTATAGAGTATACAATCGTTCGA 63192 ||||| | ||| || ||| || | ||| |||| ||| |||| || || Sbjct 825 GCCTTAACTAT--TTTAGTAGCCCTACCTTCGTTTTCATATTTTTCGTACAGATTTTTGA 882 Query 63193 ACTCGTCTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGACACATCAACGACCACT 63252 | || || ||||| |||| | ||| | ||||| | | |||||||| || ||||| | Sbjct 883 ATTCATCACCCCAGACATCGAACAAACCCGGACACTTGTGTGGACACATTAAAGACCAAT 942 Query 63253 CTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AATAGA 63311 | || | || | | |||| |||||| | ||| |||||||| | | | ||| || ||| Sbjct 943 CACCATTATTTTCTAAGCGTTCCATAAATAAATCTGGAATCCATA-ACCCATAGAAGAGA 1001 Query 63312 TCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATA 63371 ||||||| | | ||| || ||||| ||||| ||||| | ||| | || | | ||| Sbjct 1002 TCTCTTGCACGAATTTCTTCTTTTCCGGTATTTTTTTTCAAATCTAAAAATTCAAATATA 1061 Query 63372 TCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGA 63431 || | |||||||||||| || || || || | || || | ||| || | || || Sbjct 1062 TCTGCATGCCACGGTTCTAAATAAATTGCAAATGAACCGGGTCTTTTATTAACACCTTGT 1121 Query 63432 TCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGA 63487 | | |||| || ||||| | || | | |||||||| ||| |||||||| Sbjct 1122 CCAACAAATCTTGCTAAATTATTGAATACACGTAGCATTGGAACAATTCCGTTTGA 1177 >seq1919 Length=1291 Score = 98.7 bits (108), Expect = 1e-15 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 63711 GAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCG 63770 || || | ||| || || |||||||| || || || | ||| || || || || Sbjct 1 GAGAGCAAATTATATGTTTCAATAGCACTCTCAATGTCATCTCCATGTATGCCCACCGCT 60 Query 63771 ACACGCATTAACATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAG 63830 || | ||| | |||||| || ||||||||| | ||||| | |||| ||| || | || Sbjct 61 ACTCTCATAAGCATGTGTTGCGGTCTTTCAGCTATTTTCCTATTTACTTTTAAGAGATAT 120 Query 63831 GATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATA 63890 || ||||| ||||||||||||||||| |||||| ||| || || || || ||||| Sbjct 121 GAACGCTCCAATGTTTTAAAACCAAAATAATTGTATCCAAAATCCCGATCATATATAATT 180 Query 63891 ACCGAATTGAGCTTATC 63907 | ||||| || ||||| Sbjct 181 GCAGAATTTAGTTTATC 197 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628153960427760