Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq210017 533 1e-146 seq139863 401 6e-107 seq105373 390 1e-103 seq1919 84.2 2e-11 >seq210017 Length=1697 Score = 533 bits (590), Expect = 1e-146 Identities = 995/1458 (68%), Gaps = 14/1458 (1%) Strand=Plus/Plus Query 36790 TCAACTGTGAATTTTATAGGATTTGATGCCGATTTTGTTCTCATATAATACATTCCAGTT 36849 || |||||||| | |||| ||||| || | ||||||||| | |||||||||||||||| Sbjct 43 TCTACTGTGAACTGAATAGCATTTGCAGCAGGTTTTGTTCTTAAATAATACATTCCAGTT 102 Query 36850 TTTAGCCCCAATCTCCATCCGTAAAAATGCATACTGGTCAGTTTTGCGTATGTAGGATTA 36909 ||||| || | |||| | |||||||| || |||| ||| | || | || | | Sbjct 103 TTTAGTCCAGCTTTCCAAGCATAAAAATGAATTGAAGTCAATTTACCATAGTTCGGTTCA 162 Query 36910 TCTATATATATTGTCATTGATTGACTTTGATCTATAAACGCACCTCTGTCGGCTGCCATT 36969 | | || || | | ||||||||||||||| ||||| || || | || || Sbjct 163 GCCACATGAATATTAAATGATTGACTTTGATCAATAAAAGCTCCACGATCACAAGCATAA 222 Query 36970 TCTAAAATACATTTTTGAGATATCTCCCAAACCGTTTTATATATTTGTTTTATATTATCT 37029 |||| ||| | |||||| ||||| ||||| ||||| | | | ||||||| | Sbjct 223 TCTATTGTACTCCTAACAGATATTTCCCATACCGTCTTATACAAATCTCTTATATTTTGA 282 Query 37030 GGTAAATCT-----AAATGTTGAATAGAACCATTATGTAACACAATTGTATTCTTTATGT 37084 || ||||| | || ||||||||| ||| || | | | ||| || || || | Sbjct 283 GG--AATCTTTTCAATATTTTGAATAGACCCACGATTTGAAATGATTAAGTTTTTCATAT 340 Query 37085 CATTATTCCACATATTTCTACTTATT--AGTTCTCTCAATAGGTGTGGATTTACAACCTG 37142 ||| || ||||| || ||| || | || ||| | || | || |||| |||| || Sbjct 341 CATCATCCCACAAAT--CTAGTTCTGTAAGATCTTTTAACAAATGATGATTAACAATTTG 398 Query 37143 AAAATCTCCAGATAATACTCTTCTTGTATATATATTGCTAGTATATGGTTCAATGGACTC 37202 || || |||||||| || | | |||||||||| || |||||||||| || || Sbjct 399 GAATTCACCAGATAAAACCCGGCGATTATATATATTTGATGTGTATGGTTCAAATGATTC 458 Query 37203 ATTATTACTTAATATTTGAGATGTAGATGCAGTAGGCATTGGTGCTATTAGAAGGCTATT 37262 ||| |||| || ||||| | || ||||| || ||||||||||| |||| | ||| Sbjct 459 ATTGTTACCCAAAATTTGTGCGGTTGATGCTGTTGGCATTGGTGCAATTAATAACGAATT 518 Query 37263 TCTCAATCCATGTGTATTAATTCTCTTTTTTAGTTCATTCCAATCCCATAAATCTGTTGG 37322 || | |||||| | |||| | | |||| |||| |||||||||||||| |||||| Sbjct 519 TCGAACACCATGTTGAGCAATTTTATCCTTTAATTCAGACCAATCCCATAAATTTGTTGG 578 Query 37323 GTTCTTTAACCACATATCATATTGTAGAATACCTTTACTCGCTGGAGAATCGTTATATGT 37382 | | || |||||| |||||||||| |||||| ||||| | || || | | |||||| Sbjct 579 GATTTTATTCCACATGTCATATTGTAAAATACCCTTACTTACAGGGGAGCCTTCATATGT 638 Query 37383 CTCATAAGGTCCGTAAATTTTAGCTAGTTCGCAACTAGATTCTAGTGCGGCATAATATAT 37442 |||||||| || | || ||||| ||| ||||||| ||||| ||| |||| || || Sbjct 639 TTCATAAGGACCCAATTCTTGAGCTAATTCACAACTAGCTTCTAAGGCGCCATAGTAAAT 698 Query 37443 TGTTTCGAAAATTTGTATATTTAATATTTTTGCTTCTTCGCTATCGAATGCATAGCCCAA 37502 ||||| ||||||||| || |||| ||| ||||||| ||| || | | | | | || Sbjct 699 AGTTTCAAAAATTTGTTGGTTCAATAATTTAGCTTCTTTGCTTTCATAAGGAAAACGCAT 758 Query 37503 TAATATAAACACATCAGCCAAACCCTGAACACCGATACCTATGGGTCTATGTTTCTTATT 37562 || |||||| ||||||| | ||||| || || || || || |||||||| ||| Sbjct 759 TAGTATAAAAGCATCAGCAAGTCCCTGTACCCCAATTCCAATTGGTCTATGCCGTAAATT 818 Query 37563 AGATCTAGACGATTCTATCACTGGATAATAATTGATATCTATTATTTTATTTAGATTTTT 37622 ||| | | ||| || ||||||||||| | |||||| |||||||||| |||||| Sbjct 819 TGATTTTTTAGCTTCGGGGACAGGATAATAATTTACATCTATAATTTTATTTAAATTTTT 878 Query 37623 AACTAGTATTTTCGTAATTATTCTCAACTTGTCGAACATAAATACGTTA---TTATTAAC 37679 || ||||| | || | | || || | ||| ||| ||| | | ||| Sbjct 879 CGTTATAATTTTTGAAACATGTTTTAATTTATTGAAGTCAAAGGTTTTATCCTGAGAAAC 938 Query 37680 AAATTTACTCAACGAAATAGATCCTAGATTACATACAGCAACTTCATCTTCGTTACTAAA 37739 || || | | | ||||| | | |||||||||||||| ||||||| | | | Sbjct 939 GAACATATTAAGAGCTATAGACGCCAAATTACATACAGCAATTTCATCTGGCGAAGAATA 998 Query 37740 TTGTATAATCTCTGTACAGAGATTACTCGATCTAATTGTTCCCAAATTGCTTTGATTGGA 37799 | | ||| || || || | |||||| | | ||||||||||| ||| |||||| Sbjct 999 CTCCACAATTTCAGTGCATAAATTACTGCAACGAATTGTTCCCACATTTTGCTGATTGCT 1058 Query 37800 TTTTTTATTACAAGAATCTTTATATAGTATATACGGCGTTCCTTGTTCTATTTGAGCCTC 37859 |||| ||||||||| |||||| ||||| || || || |||||| || | || | ||| Sbjct 1059 TTTTCTATTACAAGCATCTTTGTATAGCATGTAAGGTGTTCCTGTCTCAACCTGTGACTC 1118 Query 37860 GATAATAGATTTCCATAAACTTCTTGCTTTAACGATCGCTTTAAtttttttCTTTGTTTC 37919 ||||| | ||| | || ||| || | | ||| | | || | |||| Sbjct 1119 AATAATTGCAAACCAAAGTGTTTGTGCCTTTATTTTTTTATTAGCTCTACCCTCTTTTTC 1178 Query 37920 GTATTCTATATATAATTTGTTAAAATCATTCCCCCATACATCGCATAATCCTGGACATTC 37979 |||| ||||||||| | || || | |||||||||||| ||| ||||| || | Sbjct 1179 ATATTTAGTATATAATTCTTCGAATTCCTCACCCCATACATCGTGTAAACCTGGGCACTT 1238 Query 37980 GCATGGACACATTAGAGACCATTCTTCATCTTTTTCTACGCGTTCCATAAATAAATCAGG 38039 ||| ||||||| ||||||||| || || ||| || | || |||||| ||||| || Sbjct 1239 ATGTGGGCACATTAAAGACCATTCATCGTCGGATTCAACTCTTTTCATAAACAAATCTGG 1298 Query 38040 TACCCATAATGCAGTAAATAAATCTTTGGTTCTATATTCTTCGTTCCCTACATTCTTTCT 38099 || ||| || ||| ||| | |||| ||| || ||| || || || |||||| | Sbjct 1299 TATCCACAAAGCATAAAACAGATCTCTGGCTCGTGTTTCCTCTTTTCCAGTATTCTTCTT 1358 Query 38100 TAAGCTTAGAAAATCGAATATATCAGCGTGCCATGGTTCTATATAAATCGACATTGCTCC 38159 |||| || ||| || | |||||||| ||||||||||||| ||| || | | ||||| Sbjct 1359 TAAGTCTAAAAATTCAAGTATATCAGAATGCCATGGTTCTAGATATATTGCAAAAGCTCC 1418 Query 38160 TGGTCTTTTATCACCTCCCTGATTAATATATCTAACTGTGTTATTATATATTCTTAACAT 38219 ||| ||||||| || || || | || |||| | | ||||| | | ||| ||||| Sbjct 1419 TGGCCTTTTATTTCCACCTTGGTCAACGTATCGAGCAACATTATTGAAAACTCTCAACAT 1478 Query 38220 AGGTACTATACCATTAGA 38237 |||||||| || ||||| Sbjct 1479 AGGTACTAAGCCGTTAGA 1496 >seq139863 Length=2592 Score = 401 bits (444), Expect = 6e-107 Identities = 528/724 (73%), Gaps = 11/724 (2%) Strand=Plus/Plus Query 11432 ACTTTTTCACAACCTAACTCTGTTAATAATCTATCTGCGACGAATTCTATATACTGAGAC 11491 ||||| ||| || || ||| | ||||||| || || || ||||| ||||| || ||| Sbjct 1287 ACTTTATCAACTCCCAATTCTCTCAATAATCGGTCAGCAACAAATTCAATATATTGCGAC 1346 Query 11492 ATTAAACAACAATTCATACCTATAAGATCCACCGGAATAGCAACTGTCAAAAACTCCTTT 11551 |||||| ||||||||||| || | || || || | || | || ||||| || | | Sbjct 1347 ATTAAATTGCAATTCATACCAATTAAATTTACAGGTAATGCGTCAGTTAAAAATTCTTGT 1406 Query 11552 TCTATATTAACCGCATCA---ATGATTATCGACGTTATAACTTCCTTAGATGGTGGATGT 11608 || || || || || ||| || ||| || | | || ||| ||| |||| ||| Sbjct 1407 TCAATTTTCACTGCTTCAGATATAATT-TCAA--TAATTCTTTCTTTACTTGGTTTTTGT 1463 Query 11609 AATAAATGTTTAAACATTAAACACGCAAAATCACAATGTAAACCTTCGTCTCTACTTATT 11668 | ||||||||||||||||||||| ||||||||||||||||| ||||| ||||| ||| Sbjct 1464 ATTAAATGTTTAAACATTAAACATGCAAAATCACAATGTAATCCTTCATCTCTTGAAATT 1523 Query 11669 AGTTCATTAGAAAATGTTAATCCGGGCATCAATCCTCGtttttttATCCAAAATATAGCA 11728 |||||||| |||||||||||||| ||||| | || |||||||||| ||||||||| | Sbjct 1524 AGTTCATTTGAAAATGTTAATCCTGGCATAAGGCCACGTTTTTTTAACCAAAATATTGAT 1583 Query 11729 GCAAATGAACCAGAAAAGAATATTCCCTCCACAGCTGCAAATGCTACTACTCTTTCTCCA 11788 ||||| |||| |||||||||||| || || |||||||| || | | | ||||||| Sbjct 1584 GCAAAACTACCACTAAAGAATATTCCTTCAACTGCTGCAAAAGCAATAATACGTTCTCCA 1643 Query 11789 TA--TACCT-TGTTGCTAGATATCCATTTTCTGGCCCAATCAGCTTTCTTTTTTACGCAT 11845 || || || || || | |||||| | | |||||||||||||| ||||| || ||| Sbjct 1644 TAATTAGCTGATTTACTTGTTATCCAATCTAATGCCCAATCAGCTTTTTTTTTAACACAT 1703 Query 11846 TCCATTGTTTCTATAGCGTTAAATAAATGCAT-TTTTTCTATATTATCTCTTACATATGT 11904 | |||||| || || ||||| || || | ||||| | ||| ||| |||||| Sbjct 1704 GGTAATGTTTCAATTGCATTAAA-AAGGAAATCTCTTTCTTTTGGATCCTTTATATATGT 1762 Query 11905 ATCTATTAATAAACTATACATTTCTGAATGAATATTTTCCATAGCTATTTGAAATCCATA 11964 ||| ||||| | || |||||||| ||||||| ||||||||||||||||||||||||||| Sbjct 1763 ATCAATTAAAATGCTGTACATTTCGGAATGAACATTTTCCATAGCTATTTGAAATCCATA 1822 Query 11965 GAAACATCGTGCCTCTGAACACTGTACATCCACATAAAATCTTTCCGCTAAATTCTCATT 12024 ||||| || || || | || || || | ||| | ||| | | ||| || || Sbjct 1823 AAAACAACGCGCTTCAGTTACTTGAACTTCTTGACTAAAACGTTCAACAAGATTTTCGTT 1882 Query 12025 TACAATACCATCACTAGATGCAAAAAATGCTAGTATATGTTTTATAAAGTATTTTTCGTC 12084 || |||||||| || ||||||||||||| | |||| ||| || | ||| | Sbjct 1883 AACTATACCATCTGAAGCAGCAAAAAATGCTAAAACATGTGATATGAAATGACGTTCTCC 1942 Query 12085 TTTAGTTAATTTATCCCAATCATCTAAATCTTTTGATAAATCTACTTCTTCAACGGTCCA 12144 ||||||||| | ||| || | ||| ||||||||||| ||||| ||||| ||||| Sbjct 1943 AGAAGTTAATTTGTTCCAGTCCGTCATATCCTTTGATAAATCAACTTCCTCAACCGTCCA 2002 Query 12145 AAAA 12148 |||| Sbjct 2003 AAAA 2006 >seq105373 Length=2707 Score = 390 bits (432), Expect = 1e-103 Identities = 845/1254 (67%), Gaps = 15/1254 (1%) Strand=Plus/Plus Query 37089 ATTCCACATATTTCTACTTATTAGTTCTCTCAATAGGTGTGGATTTACAACCTGAAAATC 37148 || ||||| ||| | | |||| ||| | | || ||| |||| || || ||||| || Sbjct 26 ATCCCACAGATTAAGATTAATTAAATCTTTAATTAAGTGATGATTAACTACTTGAAATTC 85 Query 37149 TCCAGATAATACTCTTCTTGTATATATATTGCTAGTATATGGTTCAATGGACTCATTATT 37208 ||||| | |||| ||| | |||||||| |||||| || |||| || || ||||| Sbjct 86 ACCAGAAAGAACTCGTCTATTGTATATATTTGAAGTATACGGCTCAAAAGATTCGTTATT 145 Query 37209 ACTTAATATTTGAGATGTAGATGCAGTAGGCATTGGTGCTATTAGAAGGCTATTTCTCAA 37268 || ||| ||||| | |||||||| || ||||| || || || | || ||| | | Sbjct 146 ACCTAAAATTTGTGCAGTAGATGCGGTTGGCATAGGGGCAATCAATAGTGAATTCCGGAC 205 Query 37269 TCCATGTGTATTAATTCTCTTTTTTAGTTCATTCCAATCCCATAAATCTGTTGGGTTCTT 37328 |||||| || ||| | | ||||| ||| ||||||||| || || || |||| || Sbjct 206 GCCATGTTTAGCGATTTTTTCTTTTAAGTCAGACCAATCCCACAAGTCCGT-GGGTGTTT 264 Query 37329 TAA-CCACATATCATATTGTAGAATACCTTTACTCGCTGGAGAATCGTTATATGTCTCAT 37387 || |||||||||||| || | |||||||||||| | || ||| ||||||| || |||| Sbjct 265 TATTCCACATATCATACTGCAAAATACCTTTACTTACAGGCGAACCGTTATAGGTTTCAT 324 Query 37388 AAGGTCCGTAAATTTTAGCTAGTTCGCAACTAGATTCTAGTGCGGCATAATATATTGTTT 37447 | | || || ||| |||| || ||||| | ||| | || | || || ||||||| Sbjct 325 ATGAACCATATTTTTCCGCTAACTCACAACTGGCTTCCAAAGCACCGTAGTAAATTGTTT 384 Query 37448 CGAAAATTTGTATATTTAATATTTTTGCTTCTTCGCTATCGAATGCATAGCCCAATAATA 37507 | ||||| ||| ||| |||| | | ||||||| || || | | ||| | ||||| | Sbjct 385 CAAAAATCTGTTGATTCAATAATCTAGCTTCTTTACTTTCATAAGGATAACGCAATAGGA 444 Query 37508 TAAACACATCAGCCAAACCCTGAACACCGATACCTATGGGTCTATGTTTCTTATTAGATC 37567 |||| | || ||||| || ||||| || || || || |||| ||| | ||||||| Sbjct 445 TAAAAGCGTCCGCCAATCCTTGAACTCCAATTCCAATTGGTCGATGCCTAAAATTAGATT 504 Query 37568 TAGACGATTCTATCACTGGATAATAATTGATATCTATTATTTTATTTAGATTTTTAACTA 37627 | | ||| | ||| ||||| || | |||||| |||||||| | |||| | || Sbjct 505 TTTTAGCCTCTGGAAGTGGGTAATAGTTTACATCTATAATTTTATTCAAATTTCTTGTTA 564 Query 37628 GTATTTTCGTAATTATTCTCAACTTGTCGAACATAAATACGTT---ATTATTA--ACAAA 37682 ||||| | || || |||| || || || || || || || || ||||| Sbjct 565 TAATTTTGGAAACATTTTTCAA-TTCAATAAAATCAA-ACTTTCCATTTGGTAACACAAA 622 Query 37683 TTTACTCAACGAAATAGATCCTAGATTACATACAGCAACTTCATCTTCGTTACTAAATTG 37742 || | | | ||||||| | | ||| || || |||| ||||||| | | ||| Sbjct 623 CATATTTAGAGCAATAGATGCCAAATTGCAAACGGCAATTTCATCTGAACAAGAATATTC 682 Query 37743 TATAATCTCTGTACAGAGATTACTCGATCTAATTGTTCCCAAATTGCTTTGATTGGATTT 37802 | ||| |||||||| | ||| || | | ||||||||| | ||| ||||||| ||| Sbjct 683 CACAATTTCTGTACACAAATTGCTGCAACGAATTGTTCCAAGATTTTTTTGATTACTTTT 742 Query 37803 TTTATTACAAGAATCTTTATATAGTATATACGGCGTTCCTTGTTCTATTTGAGCCTCGAT 37862 || |||| ||||| || | |||||| || | || ||| | |||||| || | Sbjct 743 ACGGTTGCAAGTGTCTTTGTACATTATATATGGATTACCAGTTTCAACTTGAGCTTCAAC 802 Query 37863 AATAGATTTCCATAAACTTCTTGCTTTAACGATCGCTTTA--AtttttttCTTTG-TTTC 37919 ||| ||| || || || ||||| || |||| | | ||| | |||| Sbjct 803 TATACTAAACCACAACGCTCGAGCCTTAACTAT---TTTAGTAGCCCTACCTTCGTTTTC 859 Query 37920 GTATTCTATATATAATTTGTTAAAATCATTCCCCCATACATCGCATAATCCTGGACATTC 37979 |||| | || | || || || |||| ||||| |||||| | || || ||||| | Sbjct 860 ATATTTTTCGTACAGATTTTTGAATTCATCACCCCAGACATCGAACAAACCCGGACACTT 919 Query 37980 GCATGGACACATTAGAGACCATTCTTCATCTTTTTCTACGCGTTCCATAAATAAATCAGG 38039 | ||||||||||| |||||| || ||| ||||||| |||||||||||||||||| || Sbjct 920 GTGTGGACACATTAAAGACCAATCACCATTATTTTCTAAGCGTTCCATAAATAAATCTGG 979 Query 38040 TACCCATAATGCAGTAAATAAATCTTTGGTTCTATATTCTTCGTTCCCTACATTCTTTCT 38099 | |||||| || || | |||| | | | | |||||| || || ||| ||| | Sbjct 980 AATCCATAACCCATAGAAGAGATCTCTTGCACGAATTTCTTCTTTTCCGGTATTTTTTTT 1039 Query 38100 TAAGCTTAGAAAATCGAATATATCAGCGTGCCATGGTTCTATATAAATCGACATTGCTCC 38159 || || ||| || |||||||| || ||||| ||||||| |||||| | | || || Sbjct 1040 CAAATCTAAAAATTCAAATATATCTGCATGCCACGGTTCTAAATAAATTGCAAATGAACC 1099 Query 38160 TGGTCTTTTATCACCTCCCTGATTAATATATCTAACTGTGTTATTATATATTCTTAACAT 38219 |||||||||| | | || || || | |||| || ||||| ||| | || ||| Sbjct 1100 GGGTCTTTTATTAACACCTTGTCCAACAAATCTTGCTAAATTATTGAATACACGTAGCAT 1159 Query 38220 AGGTACTATACCATTAGATTTGCCGTTTATACCGGATATATAAGTACCCTTAGCTCGTAT 38279 || || || || || || || |||| | | || | || |||| || || || ||||| Sbjct 1160 TGGAACAATTCCGTTTGACTTTCCGTCTGTTCCAGCAATTGAAGTCCCTTTTGCCCGTAT 1219 Query 38280 ATTACTTATCGACAATCCTATTCCACCTGCATGTTTTGATATTAAAGCGCATTG 38333 | || || || |||||||| ||| |||||| ||| |||||||| Sbjct 1220 GCAATGAATATTTAAACCAATTCCACCAGCAGATTTTGAAATTCTCGCGCATTG 1273 >seq1919 Length=1291 Score = 84.2 bits (92), Expect = 2e-11 Identities = 122/169 (72%), Gaps = 4/169 (2%) Strand=Plus/Plus Query 38468 AATTATATGTTTCTATTACATCATCTATATCACCGCCGTGAATACCTAGAGATACCCTCA 38527 ||||||||||||| || || || || ||| | || || || || | | ||| |||| Sbjct 8 AATTATATGTTTCAATAGCACTCTCAATGTCATCTCCATGTATGCCCACCGCTACTCTCA 67 Query 38528 TTAGCATATGTTGTGGTCTTTCTATTATTTTATTATT--CTGTTTAAGTAGATACGATTT 38585 | ||||| ||||| |||||||| |||||| |||| || |||||| ||||| || Sbjct 68 TAAGCATGTGTTGCGGTCTTTCAGCTATTTTCCTATTTACT-TTTAAG-AGATATGAACG 125 Query 38586 TTCTAATGTTTTTATTCCAAAATAACTATATGAATAATCTCTATCGTAT 38634 || |||||||| | ||||||||| | ||| | |||| | ||| ||| Sbjct 126 CTCCAATGTTTTAAAACCAAAATAATTGTATCCAAAATCCCGATCATAT 174 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 467287209310480