Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq210017 426 2e-114 seq139863 379 3e-100 seq105373 334 1e-86 seq1919 95.1 2e-14 >seq210017 Length=1697 Score = 426 bits (472), Expect = 2e-114 Identities = 1010/1513 (67%), Gaps = 32/1513 (2%) Strand=Plus/Plus Query 64830 TTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCC 64889 || || | |||||| ||||| | | | || ||||| || | || ||| |||||||| Sbjct 40 TTATCTACTGTGAACTGAATAGCATTTGCAGCAGGTTTTGTTCTTAAATAATACATTCCA 99 Query 64890 GTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGA 64949 |||||||| || |||| | |||||||| || || | ||| ||| |||| Sbjct 100 GTTTTTAGTCCAGCTTTCCAAGCATAAAAATGAATTGAAGTCAATTTACCATAGTTCGGT 159 Query 64950 TCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCC 65009 || || | ||| ||||| | |||||||||||||| || || ||||| | || ||| Sbjct 160 TCAGCCACATGAATATTAAATGATTGACTTTGATCAATAAAAGCTCCACGATCACAAGCA 219 Query 65010 ATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATC 65068 | ||| | || | | |||||||| | || ||||| || || |||| ||| Sbjct 220 TAATCTATTGTACTCCTAACAGATATTTCCCATACCGTCTTATACAAATCTCTTA-TATT 278 Query 65069 TTCTGGAAGGTTTG---TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGAT 65125 || |||| ||| |||| ||||| || |||| || || || || || || || Sbjct 279 TTGAGGAATCTTTTCAATATTTTGAATAGACCCACGATTTGAAATGATTAAGTTTTTCAT 338 Query 65126 CTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTG 65185 ||||||| ||| || | | || || | | || | | | ||| ||||||| | ||| Sbjct 339 ATCATCATCCCACAAATCTAGTTCTGTAAGATCTTTTAACAAATGATGATTAACAATTTG 398 Query 65186 AAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTC 65245 ||||| ||||| || || | ||| | || ||||| || || ||||| | || || Sbjct 399 GAATTCACCAGATAAAACCCGGCGATTATATATATTTGATGTGTATGGTTCAAATGATTC 458 Query 65246 ATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATT 65305 ||| || ||||||||||| || |||||||| || ||||| ||||| | ||||| ||| Sbjct 459 ATTGTTACCCAAAATTTGTGCGGTTGATGCTGTTGGCATTGGTGCAATTAATAACGAATT 518 Query 65306 TCTAAGACCGTATGTTCTG--ATTTTATCTTTTAGAGGTTC---CCAATTCCAAAGATCC 65360 || || ||| ||||| | |||||||| |||| ||| ||||| ||| | || Sbjct 519 TCGAACACC--ATGTTGAGCAATTTTATCCTTTAA---TTCAGACCAATCCCATAAATTT 573 Query 65361 GACGGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACA 65420 | || | ||||| |||||| ||||| | || ||| || Sbjct 574 GTTGGGATTTTATTCCACATGTCATATTGTAAAATACCCTTACTTACAGGGGAGCCTTCA 633 Query 65421 TATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAA 65480 ||||| || || || || | | ||||| ||||||||| || ||||| || || || Sbjct 634 TATGTTTCATAAGGACCCAATTCTTGAGCTAATTCACAACTAGCTTCTAAGGCGCCATAG 693 Query 65481 TAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGT-GCTTCCAGGCTATCAAATGGATA 65539 ||||| ||||| || || || || || || | | ||||| ||| ||| | ||| | Sbjct 694 TAAATAGTTTCAAAAAT-TTGTTGGTTCAATAATTTAGCTTCTTTGCTTTCATAAGGAAA 752 Query 65540 ATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCT 65599 | | || ||||| || || || | ||| || || ||||| || || |||||||| | Sbjct 753 ACGCATTAGTATAAAAGCATCAGCAAGTCCCTGTACCCCAATTCCAATTGGTCTATGCCG 812 Query 65600 CTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAG 65659 ||| || ||| |||||| || | |||||||||||| | ||||||||||||||| | Sbjct 813 TAAATTTGATTTTTTAGCTTCGGGGACAGGATAATAATTTACATCTATAATTTTATTTAA 872 Query 65660 ATTTCTG---ACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGCTCATC 65716 |||| | | |||| ||||| |||| || | ||| || ||||| | ||| Sbjct 873 ATTTTTCGTTATAATT--TTTGAA-ACATGTTTTAATTTATTGAAGTCAAAGGTTTTATC 929 Query 65717 TATT---ACAAACATGTTCAATGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGC 65773 || ||||| || | || | ||| |||| |||||| || || | |||| | Sbjct 930 CTGAGAAACGAACATATTAAGAGCTATAGACGCCAAATTACATACAGCAATTTCATCTGG 989 Query 65774 ATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTG 65833 | ||| | | || |||||||| | |||||| || || ||||| | |||||| Sbjct 990 CGAAGAATACTCCACAATTTCAGTGCATAAATTACTGCAACGAATTGTTCCCACATTTTG 1049 Query 65834 TTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAAT 65893 ||||| || ||| | ||||| ||||| || || || ||| | || || || || |||| Sbjct 1050 CTGATTGCTTTTTCTATTACAAGCATCTTTGTATAGCATGTAAGGTGTTCCTGTCTCAAC 1109 Query 65894 CTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCTCTT 65953 ||| || || ||||| || ||| | | | ||||||||| | || || |||| Sbjct 1110 CTGTGACTCAATAATTGCAAACCAAAGTGTTTGTGCCTTTATTTTT--TTATTAGCTCTA 1167 Query 65954 TTCTCTTTCGTATAGT--GTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAAT 66011 |||||| ||| | ||||| ||| |||||| || || ||||| |||| || || Sbjct 1168 CCCTCTTTTTCATATTTAGTATATAATTCTTCGAATTCCTCACCCCATACATCGTGTAAA 1227 Query 66012 CCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATA 66071 || || || | || || ||||| || ||||| || |||| | |||| ||||||| Sbjct 1228 CCTGGGCACTTATGTGGGCACATTAAAGACCATTCATCGTCGGATTCAACTCTTTTCATA 1287 Query 66072 AAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCTATGTTCCTCGTTTCCT 66131 || | ||| || ||||| | ||| ||| | |||||||| || |||||| ||||| Sbjct 1288 AACAAATCTGGTATCCACAAAGCATAAAACAGATCTCTGGCTCGTGTTTCCTCTTTTCCA 1347 Query 66132 GTATTCTT-TTTAAGATCGAGGAACGCCATAATATCATAATGCCACGGTTCCAAGTATAT 66190 |||||||| |||||| || | || | | |||||| ||||||| ||||| | ||||| Sbjct 1348 GTATTCTTCTTTAAG-TCTAAAAATTCAAGTATATCAGAATGCCATGGTTCTAGATATAT 1406 Query 66191 GGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATA 66250 || | | |||| |||| ||| ||||| || || || | ||||| ||| ||||| | Sbjct 1407 TGCAAAAGCTCCTGGCCTTTTATTTCCACCTTGGTCAACGTATCGAGCAACATTATTGAA 1466 Query 66251 AACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCC 66310 |||||||||||| || | | || || || ||||| || || | || |||| Sbjct 1467 AACTCTCAACATAGGTACTAAGCCGTTAGAAACCCCATTTGTACCAGCAATTGTTGTTCC 1526 Query 66311 ACTTGCACGAATA 66323 ||||||||||| Sbjct 1527 TGTTGCACGAATA 1539 >seq139863 Length=2592 Score = 379 bits (420), Expect = 3e-100 Identities = 532/743 (72%), Gaps = 5/743 (1%) Strand=Plus/Plus Query 35950 AACATTATAAAtttttttAAATCCCAATTCAGAAATCAATCTATCTGCGACAAATTCTAT 36009 |||||| || ||| | || ||||||||| | |||| || || |||||||| || Sbjct 1279 AACATTTTAC--TTTATCAACTCCCAATTCTCTCAATAATCGGTCAGCAACAAATTCAAT 1336 Query 36010 ATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAG 36069 |||| ||| | | |||||||| || || | || || || | || |||| | Sbjct 1337 ATATTGCGACATTAAATTGCAATTCATACCAATTAAATTTACAGGTAATGCGTCAGTTAA 1396 Query 36070 AAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATAGATATTACTGTTTCTTCACTCGG 36129 ||||||||||||||| || || || | |||||| || | | |||||| ||| || Sbjct 1397 AAATTCTTGTTCAATTTTCACTGCTTCAGATATAATTTCAATAATTCTTTCTTTACTTGG 1456 Query 36130 TGGATACAATAAATGTTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCT 36189 | | | ||||||||||||||| |||||||| ||||| || |||| || || ||||| Sbjct 1457 TTTTTGTATTAAATGTTTAAACATTAAACATGCAAAATCACAATGTAATCCTTCATCTCT 1516 Query 36190 ACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAA 36249 ||||| ||| || ||||| || | ||| ||||| |||||||| ||||| | |||||| Sbjct 1517 TGAAATTAGTTCATTTGAAAATGTTAATCCTGGCATAAGGCCACGTTTTTTTAACCAAAA 1576 Query 36250 TATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCT 36309 ||| || ||||| ||| |||||| |||||||| ||||| ||||| ||||||| | Sbjct 1577 TATTGATGCAAAACTACCACTAAAGAATATTCCTTCAACTGCTGCAAAAGCAATAATACG 1636 Query 36310 CTCTCCATAACCGGC--ACTGTCATGT-ATCCACTTTTGAGCCCAATCGGCCTTCTTTTT 36366 ||||||||| || | | | ||| ||||| | | |||||||| || || ||||| Sbjct 1637 TTCTCCATAATTAGCTGATTTACTTGTTATCCAATCTAATGCCCAATCAGCTTTTTTTTT 1696 Query 36367 TACACAAGGCATTGTCTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAAC 36426 ||||| || | ||| || || |||||||| || | | | |||| || ||| || | Sbjct 1697 AACACATGGTAATGTTTCAATTGCATTAAAAAGGAAATCTCTTTCTTTTGGATCCTTTAT 1756 Query 36427 ATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAA 36486 |||||||||||| |||| || |||||||| ||||||| ||||| || || |||||||| Sbjct 1757 ATATGTATCAATTAAAATGCTGTACATTTCGGAATGAACATTTTCCATAGCTATTTGAAA 1816 Query 36487 TCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATT 36546 ||| || ||||| | || || || | || |||||| || ||| ||||| | | ||| Sbjct 1817 TCCATAAAAACAACGCGCTTCAGTTACTTGAACTTCTTGACTAAAACGTTCAACAAGATT 1876 Query 36547 TTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTT 36606 ||| || ||||| || || || |||||||| || || |||||| ||| |||| Sbjct 1877 TTCGTTAACTATACCATCTGAAGCAGCAAAAAATGCTAAAACATGTGATATGAAATGACG 1936 Query 36607 TTCGTTTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCAC 36666 ||| | |||| ||| ||||| || | ||||| || |||| ||| ||||| || || Sbjct 1937 TTCTCCAGAAGTTAATTTGTTCCAGTCCGTCATATCCTTTGATAAATCAACTTCCTCAAC 1996 Query 36667 TGTCCAAAATGATGCCTCTGCCT 36689 |||||||| ||||| || |||| Sbjct 1997 CGTCCAAAAAGATGCTTCAGCCT 2019 >seq105373 Length=2707 Score = 334 bits (370), Expect = 1e-86 Identities = 709/1052 (67%), Gaps = 17/1052 (2%) Strand=Plus/Plus Query 65152 TTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAG 65211 ||||| || ||| | || ||||||||||||||||||| ||||| | |||| | | Sbjct 46 TTAAATCTTTAATTAAGTGATGATTAACTACTTGAAATTCACCAGAAAGAACTCGTCTAT 105 Query 65212 TGTAAATATTACTGGTATACGGTTCCACAGACTCATTATTTCCCAAAATTTGAGCAGTTG 65271 |||| ||||| |||||||| || | ||| || ||||| || |||||||| ||||| | Sbjct 106 TGTATATATTTGAAGTATACGGCTCAAAAGATTCGTTATTACCTAAAATTTGTGCAGTAG 165 Query 65272 ATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTGATTTTAT 65331 |||| || |||||||| || | ||||| ||| | | || | | | |||||| | Sbjct 166 ATGCGGTTGGCATAGGGGCAATCAATAGTGAATTCCGGACGCCATGTTTAGCGATTTTTT 225 Query 65332 CTTTTAGAGGTTC---CCAATTCCAAAGATCCGACGGTACAACNNNNNNNNNNNNNNNTT 65388 |||||| || || ||||| ||| | |||| ||| | Sbjct 226 CTTTTA-AG--TCAGACCAATCCCACAAGTCCGTGGGTGTTTTATTCCACATATCATACT 282 Query 65389 GTAGAATACCGTTACTGGCGTACGATCCTACATATGTATCGTATGGTCCTTCCTTCTCAG 65448 | | |||||| ||||| | ||| || ||| || || |||| || | || || | Sbjct 283 GCAAAATACCTTTACTTACAGGCGAACCGTTATAGGTTTCATATGAACCATATTTTTCCG 342 Query 65449 CTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTA 65508 ||| |||||||| || || || |||||||| ||||| ||||| || |||| | ||| | Sbjct 343 CTAACTCACAACTGGCTTCCAAAGCACCGTAGTAAATTGTTTCAAAAATCTGTTGATTCA 402 Query 65509 GATCTTGT-GCTTCCAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAAT 65567 || | | ||||| || ||| | |||||| || || ||||| ||||| || ||| Sbjct 403 -ATAATCTAGCTTCTTTACTTTCATAAGGATAACGCAATAGGATAAAAGCGTCCGCCAAT 461 Query 65568 CCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATA 65627 |||||||| ||||| || || |||| ||| || |||||| ||| ||| ||||||| Sbjct 462 CCTTGAACTCCAATTCCAATTGGTCGATGCCTAAAATTAGATTTTTTAGCCTCTGGAAGT 521 Query 65628 GGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACAATTACTTTGACCACATCC 65687 || ||||| || | ||||||||||||||| | |||||| || | |||| |||| Sbjct 522 GGGTAATAGTTTACATCTATAATTTTATTCAAATTTCTTGTTATAATTTTGGAAACATTT 581 Query 65688 TTCAGTTTGAGAAAATCAAA---TCGCTCATCTATTACAAACATGTTCAATGCAACAGAT 65744 |||| || | ||||||||| || | || |||||||| || | |||| |||| Sbjct 582 TTCAATTCAATAAAATCAAACTTTCCATTTGGTAACACAAACATATTTAGAGCAATAGAT 641 Query 65745 GCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGA 65804 |||| ||| |||||||| | |||| | | | ||||| | || || || || | | Sbjct 642 GCCAAATTGCAAACGGCAATTTCATCTGAACAAGAATATTCCACAATTTCTGTACACAAA 701 Query 65805 TTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTA 65864 || || || || ||||| | ||||| ||||||||| || ||| || | || || Sbjct 702 TTGCTGCAACGAATTGTTCCAAGATTTTTTTGATTACTTTTACGGTTGCAAGTGTCTTTG 761 Query 65865 TAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACT 65924 || | || ||||| |||||||||||| |||| ||| | || ||| | || Sbjct 762 TACATTATATATGGATTACCAGTTTCAACTTGAGCTTCAACTATACTAAACCACAACGCT 821 Query 65925 CGAGCCTTTATTATAGATTTGTATCTCT--TTTCTCTTTCGTATAGTGTATACAATCGTT 65982 |||||||| | ||| || ||| | || ||| |||| ||| | |||| || Sbjct 822 CGAGCCTTAACTAT--TTTAGTAGCCCTACCTTCGTTTTCATATTTTTCGTACAGATTTT 879 Query 65983 CGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACC 66042 ||| || || ||||| |||| | ||| || ||||| | | |||||||| || |||| Sbjct 880 TGAATTCATCACCCCAGACATCGAACAAACCCGGACACTTGTGTGGACACATTAAAGACC 939 Query 66043 ACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AAT 66101 | || || | || | | |||| |||||| | ||| |||||||| | | | ||| || Sbjct 940 AATCACCATTATTTTCTAAGCGTTCCATAAATAAATCTGGAATCCATA-ACCCATAGAAG 998 Query 66102 AAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 66161 | |||||| | | | ||| || ||||| ||||| ||||| | ||| | || | | Sbjct 999 AGATCTCTTGCACGAATTTCTTCTTTTCCGGTATTTTTTTTCAAATCTAAAAATTCAAAT 1058 Query 66162 ATATCATAATGCCACGGTTCCAAGTATATGGC 66193 ||||| |||||||||||| || || || || Sbjct 1059 ATATCTGCATGCCACGGTTCTAAATAAATTGC 1090 >seq1919 Length=1291 Score = 95.1 bits (104), Expect = 2e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 66504 GAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCG 66563 || || | ||| || || |||||||| || || || | ||| || || || || Sbjct 1 GAGAGCAAATTATATGTTTCAATAGCACTCTCAATGTCATCTCCATGTATGCCCACCGCT 60 Query 66564 ACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAG 66623 || | ||| | |||||| || ||||||||| | || || | |||| ||| || | || Sbjct 61 ACTCTCATAAGCATGTGTTGCGGTCTTTCAGCTATTTTCCTATTTACTTTTAAGAGATAT 120 Query 66624 GATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATA 66683 || ||||| ||||||||||||||||| |||||| ||| || || || || ||||| Sbjct 121 GAACGCTCCAATGTTTTAAAACCAAAATAATTGTATCCAAAATCCCGATCATATATAATT 180 Query 66684 ACCGAGTTGAGTTTATC 66700 | || || |||||||| Sbjct 181 GCAGAATTTAGTTTATC 197 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 656434261230280