Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq210017 509 2e-139 seq105373 401 9e-107 seq139863 376 4e-99 seq1919 104 3e-17 >seq210017 Length=1697 Score = 509 bits (564), Expect = 2e-139 Identities = 988/1448 (68%), Gaps = 18/1448 (1%) Strand=Plus/Plus Query 78709 TTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCC 78768 || || | |||||| ||||| | | | || ||||| || | || ||| |||||||| Sbjct 40 TTATCTACTGTGAACTGAATAGCATTTGCAGCAGGTTTTGTTCTTAAATAATACATTCCA 99 Query 78769 GTTTTTAGACCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTCGGA 78828 |||||||| || |||| | || ||||| || || | ||| ||| |||| Sbjct 100 GTTTTTAGTCCAGCTTTCCAAGCATAAAAATGAATTGAAGTCAATTTACCATAGTTCGGT 159 Query 78829 TCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCC 78888 || || | ||| ||||| | |||||||||||||| || || ||||| | || ||| Sbjct 160 TCAGCCACATGAATATTAAATGATTGACTTTGATCAATAAAAGCTCCACGATCACAAGCA 219 Query 78889 ATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATC 78947 | ||| | || | | |||||||| | || ||||| || || |||| ||| Sbjct 220 TAATCTATTGTACTCCTAACAGATATTTCCCATACCGTCTTATACAAATCTCTTA-TATT 278 Query 78948 TTCTGGAAGGTTTG---TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGAT 79004 || |||| ||| |||| ||||| || |||| || || || || || || || Sbjct 279 TTGAGGAATCTTTTCAATATTTTGAATAGACCCACGATTTGAAATGATTAAGTTTTTCAT 338 Query 79005 CTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTG 79064 || |||| ||| || | | || || | | || | | | ||| ||||||| | ||| Sbjct 339 ATCATCATCCCACAAATCTAGTTCTGTAAGATCTTTTAACAAATGATGATTAACAATTTG 398 Query 79065 AAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCGATTC 79124 ||||| ||||| || || | ||| | || ||||| || |||||||| | ||||| Sbjct 399 GAATTCACCAGATAAAACCCGGCGATTATATATATTTGATGTGTATGGTTCAAATGATTC 458 Query 79125 ATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAACTATT 79184 ||| || ||||||||||| || |||||||| |||||||| ||||| | ||||| ||| Sbjct 459 ATTGTTACCCAAAATTTGTGCGGTTGATGCTGTTGGCATTGGTGCAATTAATAACGAATT 518 Query 79185 TCTAAGACCGT-ATGATCTGATTTTATCTTTTAGAGATTC---CCAATCCCAAAGATCAG 79240 || || ||| | ||| | |||||||| |||| |||| ||||||||| | || | Sbjct 519 TCGAACACCATGTTGAGC-AATTTTATCCTTTA---ATTCAGACCAATCCCATAAATTTG 574 Query 79241 ACGGGACAACATTCCAAAGATCATATTGTAGAATACCGTTACTAGCGTATGATCCTGTGT 79300 |||| |||||| | |||||||||| |||||| ||||| | || ||| | Sbjct 575 TTGGGATTTTATTCCACATGTCATATTGTAAAATACCCTTACTTACAGGGGAGCCTTCAT 634 Query 79301 ATGTTTCATAAGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATGCTCCGTAAT 79360 ||||||||||||| || | || |||||||||||||| || ||||| || || || | Sbjct 635 ATGTTTCATAAGGACCCAATTCTTGAGCTAATTCACAACTAGCTTCTAAGGCGCCATAGT 694 Query 79361 AAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTATCAAATGGATAAT 79420 |||| ||||| ||||| | | || | || |||||| ||| ||| | ||| || Sbjct 695 AAATAGTTTCAAAAATTTGTTGGTTCAATAATTTAGCTTCTTTGCTTTCATAAGGAAAAC 754 Query 79421 TTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCT 79480 | || ||||| || || || | ||| || || ||||| || || |||||||| | Sbjct 755 GCATTAGTATAAAAGCATCAGCAAGTCCCTGTACCCCAATTCCAATTGGTCTATGCCGTA 814 Query 79481 TATTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGAT 79540 ||| || ||| |||||| || | |||||||||||| | ||||||||||||||| | || Sbjct 815 AATTTGATTTTTTAGCTTCGGGGACAGGATAATAATTTACATCTATAATTTTATTTAAAT 874 Query 79541 TCCTGACTATTACTTTGACCACATCCTTTAGTTTGAGAAAATCAAATCGTCCATC---TA 79597 | | ||| | ||| |||| |||| ||| || ||||| | ||| Sbjct 875 TTTTCGTTATAATTTTTGAAACATGTTTTAATTTATTGAAGTCAAAGGTTTTATCCTGAG 934 Query 79598 TTACAAACATGTTCAACGCGACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCG 79657 || ||||| || | || | ||| |||| |||||| || || | |||| | | Sbjct 935 AAACGAACATATTAAGAGCTATAGACGCCAAATTACATACAGCAATTTCATCTGGCGAAG 994 Query 79658 CATATTGTATTATTTCAGTGCAGAGGTTACTACACTTAATGGTTCCTAAATTTTGTTGAT 79717 ||| | | ||||||||||| | ||||| || ||| ||||| | |||||| |||| Sbjct 995 AATACTCCACAATTTCAGTGCATAAATTACTGCAACGAATTGTTCCCACATTTTGCTGAT 1054 Query 79718 TACTCTTTTTGTTACACGCATCCTTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAG 79777 | || ||| | ||||| ||||| || || || ||| | || || || || |||| ||| | Sbjct 1055 TGCTTTTTCTATTACAAGCATCTTTGTATAGCATGTAAGGTGTTCCTGTCTCAACCTGTG 1114 Query 79778 ATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGACTTGTATCTCTTTTCTC 79837 | || ||||| || ||| | | | ||||||||| | || ||| ||| Sbjct 1115 ACTCAATAATTGCAAACCAAAGTGTTTGTGCCTTTATTTTTTTATTAGCTCTACCCTCTT 1174 Query 79838 TTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGAC 79897 |||| |||| ||||||||| |||||| || || ||||| ||||||| ||| || || | Sbjct 1175 TTTCATATTTAGTATATAATTCTTCGAATTCCTCACCCCATACATCGTGTAAACCTGGGC 1234 Query 79898 ATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGAT 79957 | | | || ||||| || ||||| || | || | |||| ||||||||| | || Sbjct 1235 ACTTATGTGGGCACATTAAAGACCATTCATCGTCGGATTCAACTCTTTTCATAAACAAAT 1294 Query 79958 CAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCT 80017 | || ||||| | ||| ||| |||||||||| || ||||| ||||| ||||||| Sbjct 1295 CTGGTATCCACAAAGCATAAAACAGATCTCTGGCTCGTGTTTCCTCTTTTCCAGTATTCT 1354 Query 80018 T-TTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATA 80076 | |||||| || | || | | |||||||||||||| ||||| | ||||| || | | Sbjct 1355 TCTTTAAG-TCTAAAAATTCAAGTATATCAGAATGCCATGGTTCTAGATATATTGCAAAA 1413 Query 80077 ACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTC 80136 |||| || | ||| ||||| || || || | ||||| ||| ||||| |||||||| Sbjct 1414 GCTCCTGGCCTTTTATTTCCACCTTGGTCAACGTATCGAGCAACATTATTGAAAACTCTC 1473 Query 80137 AACATTGG 80144 ||||| || Sbjct 1474 AACATAGG 1481 >seq105373 Length=2707 Score = 401 bits (444), Expect = 9e-107 Identities = 728/1054 (69%), Gaps = 21/1054 (2%) Strand=Plus/Plus Query 79031 TTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAG 79090 ||||| || ||| | || ||||||||||||||||||| ||||| | |||| | | Sbjct 46 TTAAATCTTTAATTAAGTGATGATTAACTACTTGAAATTCACCAGAAAGAACTCGTCTAT 105 Query 79091 TGTAAATATTACTGGTATATGGTTCCACCGATTCATTATTTCCCAAAATTTGAGCAGTTG 79150 |||| ||||| ||||| || || | ||||| ||||| || |||||||| ||||| | Sbjct 106 TGTATATATTTGAAGTATACGGCTCAAAAGATTCGTTATTACCTAAAATTTGTGCAGTAG 165 Query 79151 ATGCCGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGATCTGATTTTAT 79210 |||| ||||||||||| || | ||||| ||| | | || | | |||||| | Sbjct 166 ATGCGGTTGGCATAGGGGCAATCAATAGTGAATTCCGGACGCCATGTTTAGCGATTTTTT 225 Query 79211 CTTTTAG---AGATTCCCAATCCCAAAGATCAGACGGGACAACATTCCAAAGATCATATT 79267 |||||| ||| ||||||||| | || | || |||||| | |||||| | Sbjct 226 CTTTTAAGTCAGA---CCAATCCCACAAGTCCGTGGGTGTTTTATTCCACATATCATACT 282 Query 79268 GTAGAATACCGTTACTAGCGTATGATCCTGTGTATGTTTCATAAGGTCCTTCCTTTTCGG 79327 | | |||||| ||||| | || || | || |||||||| | || | ||||| | Sbjct 283 GCAAAATACCTTTACTTACAGGCGAACCGTTATAGGTTTCATATGAACCATATTTTTCCG 342 Query 79328 CTAATTCACAACTCGCCTCTAATGCTCCGTAATAAATGGTTTCGAAAATCTTCTTATTGA 79387 |||| |||||||| || || || || ||||| ||||| ||||| ||||||| | ||| | Sbjct 343 CTAACTCACAACTGGCTTCCAAAGCACCGTAGTAAATTGTTTCAAAAATCTGTTGATTCA 402 Query 79388 GATCTTGT-GCTTCTAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAAT 79446 || | | |||||| || ||| | |||||| || || ||||| ||||| || ||| Sbjct 403 -ATAATCTAGCTTCTTTACTTTCATAAGGATAACGCAATAGGATAAAAGCGTCCGCCAAT 461 Query 79447 CCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAAATTTCAGCTTCTGGAATA 79506 |||||||| ||||| || || |||| ||| || |||||| ||| ||| ||||||| Sbjct 462 CCTTGAACTCCAATTCCAATTGGTCGATGCCTAAAATTAGATTTTTTAGCCTCTGGAAGT 521 Query 79507 GGATAATAATTAATATCTATAATTTTATTGAGATTCCTGACTATTACTTTGACCACATCC 79566 || ||||| || | ||||||||||||||| | ||| || ||| | |||| |||| Sbjct 522 GGGTAATAGTTTACATCTATAATTTTATTCAAATTTCTTGTTATAATTTTGGAAACATTT 581 Query 79567 TTTAGTTTGAGAAAATCAAATCGTCCAT---CTATTACAAACATGTTCAACGCGACAGAT 79623 || | || | ||||||||| ||||| || |||||||| || | || | |||| Sbjct 582 TTCAATTCAATAAAATCAAACTTTCCATTTGGTAACACAAACATATTTAGAGCAATAGAT 641 Query 79624 GCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATTTCAGTGCAGAGG 79683 |||| ||| |||||||| | |||| | | | ||||| | ||||| || || | Sbjct 642 GCCAAATTGCAAACGGCAATTTCATCTGAACAAGAATATTCCACAATTTCTGTACACAAA 701 Query 79684 TTACTACACTTAATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTA 79743 || || || ||| ||||| | ||||| ||||||||| || ||| || | || || Sbjct 702 TTGCTGCAACGAATTGTTCCAAGATTTTTTTGATTACTTTTACGGTTGCAAGTGTCTTTG 761 Query 79744 TAAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACT 79803 || | || | ||| |||||||||||| |||| ||| | || ||| | || Sbjct 762 TACATTATATATGGATTACCAGTTTCAACTTGAGCTTCAACTATACTAAACCACAACGCT 821 Query 79804 CGAGCCTTTATTATAGACTTGTATCTCT--TTTCTCTTTCGTATTGT--GTATATAATCG 79859 |||||||| | ||| | ||| | || ||| |||| |||| | ||| | | | Sbjct 822 CGAGCCTTAACTAT--TTTAGTAGCCCTACCTTCGTTTTCATATTTTTCGTACAGATT-- 877 Query 79860 TTCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGA 79919 || ||| || || ||||| |||||| || || ||||| | || |||||||| || || Sbjct 878 TTTGAATTCATCACCCCAGACATCGAACAAACCCGGACACTTGTGTGGACACATTAAAGA 937 Query 79920 CCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-A 79978 ||| || |||| || | || |||| |||||| | ||| |||||||| | | | ||| | Sbjct 938 CCAATCACCATTATTTTCTAAGCGTTCCATAAATAAATCTGGAATCCATA-ACCCATAGA 996 Query 79979 ATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCA 80038 | |||||||| | | | || || ||||| ||||| ||||| | ||| | || | | Sbjct 997 AGAGATCTCTTGCACGAATTTCTTCTTTTCCGGTATTTTTTTTCAAATCTAAAAATTCAA 1056 Query 80039 TAATATCAGAATGCCACGGTTCCAAGTATATGGC 80072 ||||| | |||||||||||| || || || || Sbjct 1057 ATATATCTGCATGCCACGGTTCTAAATAAATTGC 1090 >seq139863 Length=2592 Score = 376 bits (416), Expect = 4e-99 Identities = 532/743 (72%), Gaps = 5/743 (1%) Strand=Plus/Plus Query 49752 AACATTATAAAtttttttAAATCCCAATTCAGAAATCAATCTATCCGCGACAAATTCTAT 49811 |||||| || ||| | || ||||||||| | |||| || || |||||||| || Sbjct 1279 AACATTTTAC--TTTATCAACTCCCAATTCTCTCAATAATCGGTCAGCAACAAATTCAAT 1336 Query 49812 ATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCGCAGTAAG 49871 |||| ||| | | |||||||| || || | || || || | || |||| | Sbjct 1337 ATATTGCGACATTAAATTGCAATTCATACCAATTAAATTTACAGGTAATGCGTCAGTTAA 1396 Query 49872 AAATTCTTGTTCAATGGATACCGCATCTGTTATAATAGATCTAACGGTTTCTTCACTCGG 49931 ||||||||||||||| || || || | |||||| ||| |||||| ||| || Sbjct 1397 AAATTCTTGTTCAATTTTCACTGCTTCAGATATAATTTCAATAATTCTTTCTTTACTTGG 1456 Query 49932 TGGATGCAATAAATGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCT 49991 | || | ||||||||||||||| |||||||| ||||| || || | || || ||||| Sbjct 1457 TTTTTGTATTAAATGTTTAAACATTAAACATGCAAAATCACAATGTAATCCTTCATCTCT 1516 Query 49992 ACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAA 50051 ||||||||| || ||||| || | ||| ||||| |||||||| ||||| | |||||| Sbjct 1517 TGAAATTAGTTCATTTGAAAATGTTAATCCTGGCATAAGGCCACGTTTTTTTAACCAAAA 1576 Query 50052 TATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCT 50111 ||| || ||||| ||| |||||| |||||||| ||||| ||||| |||| || | Sbjct 1577 TATTGATGCAAAACTACCACTAAAGAATATTCCTTCAACTGCTGCAAAAGCAATAATACG 1636 Query 50112 CTCTCCATAACTGGC-GCTGT-CATG-TATCCACTTTTGAGCCCAATCGGCCTTCTTTTT 50168 ||||||||| | || | | | | || |||||| | | |||||||| || || ||||| Sbjct 1637 TTCTCCATAATTAGCTGATTTACTTGTTATCCAATCTAATGCCCAATCAGCTTTTTTTTT 1696 Query 50169 TACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAAC 50228 ||||| || | ||||| || |||||||| || | | | |||| || ||| || | Sbjct 1697 AACACATGGTAATGTTTCAATTGCATTAAAAAGGAAATCTCTTTCTTTTGGATCCTTTAT 1756 Query 50229 ATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAA 50288 ||| ||||| || |||| || |||||||| ||||||| ||||| || || || ||||| Sbjct 1757 ATATGTATCAATTAAAATGCTGTACATTTCGGAATGAACATTTTCCATAGCTATTTGAAA 1816 Query 50289 TCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTCAGCTAAATT 50348 ||| || ||||| | || || || | || |||||| || ||| |||||| | | ||| Sbjct 1817 TCCATAAAAACAACGCGCTTCAGTTACTTGAACTTCTTGACTAAAACGTTCAACAAGATT 1876 Query 50349 TTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATGTTT 50408 ||| || ||||| || || || |||||||| || || |||||| ||| ||||| Sbjct 1877 TTCGTTAACTATACCATCTGAAGCAGCAAAAAATGCTAAAACATGTGATATGAAATGACG 1936 Query 50409 TTCGTTGGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCAC 50468 ||| | |||| ||| ||||| || | ||||| || |||| ||| ||||| || || Sbjct 1937 TTCTCCAGAAGTTAATTTGTTCCAGTCCGTCATATCCTTTGATAAATCAACTTCCTCAAC 1996 Query 50469 TGTCCAAAATGATGCCTCTGCCT 50491 |||||||| ||||| || |||| Sbjct 1997 CGTCCAAAAAGATGCTTCAGCCT 2019 >seq1919 Length=1291 Score = 104 bits (114), Expect = 3e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 80383 GACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGAATTCCTACCGCG 80442 || || | ||| || || |||||||| || || || | ||| || || ||||| Sbjct 1 GAGAGCAAATTATATGTTTCAATAGCACTCTCAATGTCATCTCCATGTATGCCCACCGCT 60 Query 80443 ACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAA 80502 || | ||| | |||||| || ||||||||| | || || |||||| ||| || | || Sbjct 61 ACTCTCATAAGCATGTGTTGCGGTCTTTCAGCTATTTTCCTATTTACTTTTAAGAGATAT 120 Query 80503 GATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATA 80562 || ||||| ||||||||||||||||| |||||| ||| || || || || ||||| Sbjct 121 GAACGCTCCAATGTTTTAAAACCAAAATAATTGTATCCAAAATCCCGATCATATATAATT 180 Query 80563 ACCGAGTTGAGTTTATC 80579 | || || |||||||| Sbjct 181 GCAGAATTTAGTTTATC 197 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 716371519899880