Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_004066.1 Length=36798 Score E Sequences producing significant alignments: (Bits) Value seq205685 116 9e-22 seq111081 116 9e-22 >seq205685 Length=35797 Score = 116 bits (128), Expect = 9e-22 Identities = 100/124 (81%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 20417 AAATGGATGTCAAAGCATTTGCCAATAAAGCTAAGAAGTACGTTCAAGAAAAAGACTTTT 20476 ||||||||||||||||||||| | || ||||||||||| || | ||||||||||| | Sbjct 18482 AAATGGATGTCAAAGCATTTGAAACAAAGGCTAAGAAGTATGTCAAGGAAAAAGACTTCT 18423 Query 20477 CACATCAAGCAAATCAAGTATTGAAACTTTATAACTTGACCATGAGAGTGAATCGTTTAG 20536 | | |||||| |||| || ||||||| |||||||| | | |||| | ||||||| |||| Sbjct 18422 CGCCTCAAGCGAATCGAGAATTGAAAATTTATAACCTTAAAATGAAACTGAATCGCTTAG 18363 Query 20537 AACT 20540 | || Sbjct 18362 AGCT 18359 >seq111081 Length=2465 Score = 116 bits (128), Expect = 9e-22 Identities = 173/243 (71%), Gaps = 2/243 (1%) Strand=Plus/Plus Query 8355 AGCAGTTGCCACTTTTACTCTTGCAGTTAATCGAGCATTTAAAAACGCTAATGGAGAAAG 8414 |||||| || || ||||| || || | || || |||| || || |||||| | | Sbjct 2217 AGCAGTGGCAACCTTTACCCTAGCGTTAAACCGTAACTTTACGAATGCAAATGGAAATCG 2276 Query 8415 AGAAGCTGACTTTATCAGTTGTGTTATTTGGGGTAAATCAGCCGAAAACTTGGCCAATTG 8474 ||||| || ||||| | ||||| |||||| ||||| | || |||| |||| |||| Sbjct 2277 TGAAGCAGATTTTATTAACTGTGTGATTTGGCGTAAACCTGCTGAAACAATGGCTAATTA 2336 Query 8475 GACTCATAAAGGTCAATTAATTGGAGTTATTGGGAATATCCAGACTCGAAACTATGAGAA 8534 | | ||||| ||| | || || | ||| |||||| || ||||||||||||| Sbjct 2337 TGCCAAGAAAGGCACATTGCTAGGTGTAACTGGTCGTATCCAAACGAGAAACTATGAGAA 2396 Query 8535 CCAACAAGGGCAGCGTGTTTATATTACGGAGGTTGTC-GCAAGTAATTTCCAAGTACTAG 8593 |||||||| || ||||||||| | || || ||||| || | |||||||||| | ||| Sbjct 2397 TCAACAAGGTCAACGTGTTTATGTGACTGAAATTGTCTGCGA-TAATTTCCAACTGTTAG 2455 Query 8594 AAA 8596 ||| Sbjct 2456 AAA 2458 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 117336815509040