Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq210017 444 8e-120 seq139863 389 5e-103 seq105373 343 2e-89 seq1919 107 3e-18 >seq210017 Length=1697 Score = 444 bits (492), Expect = 8e-120 Identities = 1011/1510 (67%), Gaps = 26/1510 (2%) Strand=Plus/Plus Query 70792 TTGTCCAATGTAAACTGAATGGGAGAGGATGCGGCTTTCGTACGTAGATAGTACATGCCT 70851 || || | ||| |||||||| | | | || | ||| || | || ||| ||||| || Sbjct 40 TTATCTACTGTGAACTGAATAGCATTTGCAGCAGGTTTTGTTCTTAAATAATACATTCCA 99 Query 70852 GTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAGCTAGGA 70911 |||||||| || |||| | |||||||| || || | ||| |||| | || Sbjct 100 GTTTTTAGTCCAGCTTTCCAAGCATAAAAATGAATTGAAGTCAATTTACCATAGTTCGGT 159 Query 70912 TCGGCTATGTGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCC 70971 || || | |||||||| | || ||||||||||| || || ||||| | || ||| Sbjct 160 TCAGCCACATGAATATTAAATGATTGACTTTGATCAATAAAAGCTCCACGATCACAAGCA 219 Query 70972 ATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATC 71030 | ||| | || | | |||||||| | || ||||| || || |||| ||| Sbjct 220 TAATCTATTGTACTCCTAACAGATATTTCCCATACCGTCTTATACAAATCTCTTA-TATT 278 Query 71031 TTCTGGAAGGTTTG---TATTCTGAATGGATCCACCATCTGCAATAATCCTATTTTTGAT 71087 || |||| ||| |||| ||||| || |||| || || ||| || ||||| || Sbjct 279 TTGAGGAATCTTTTCAATATTTTGAATAGACCCACGATTTGAAATGATTAAGTTTTTCAT 338 Query 71088 CTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACTACTTG 71147 || |||| ||| || | | || || | | || | | | |||| ||||||| | ||| Sbjct 339 ATCATCATCCCACAAATCTAGTTCTGTAAGATCTTTTAACAAATGATGATTAACAATTTG 398 Query 71148 AAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCACTGACTC 71207 ||||| ||||| || || | ||| | || ||||| || || ||||| | ||| || Sbjct 399 GAATTCACCAGATAAAACCCGGCGATTATATATATTTGATGTGTATGGTTCAAATGATTC 458 Query 71208 ATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAGACTATT 71267 ||| || ||||||||||| || |||||||| || ||||| ||||| | |||| ||| Sbjct 459 ATTGTTACCCAAAATTTGTGCGGTTGATGCTGTTGGCATTGGTGCAATTAATAACGAATT 518 Query 71268 TCTAAGACCATGT-GATCGGATTTTATCTTTTAGAGATTC---CCAATTCCAAAGATCCG 71323 || || ||||||| || | |||||||| |||| |||| ||||| ||| | || | Sbjct 519 TCGAACACCATGTTGAGCA-ATTTTATCCTTTA---ATTCAGACCAATCCCATAAATTTG 574 Query 71324 ATGGTACAACNNNNNNNNNNNNNNNNNNNNNNATGCCGTTACTAGCGTATGATCCTGCAT 71383 ||| | || || ||||| | || ||| ||| Sbjct 575 TTGGGATTTTATTCCACATGTCATATTGTAAAATACCCTTACTTACAGGGGAGCCTTCAT 634 Query 71384 ATGTATCGTATGGTCCTTCTTTTTCGGCTAGTTCACAACTCGCCTCTAATGCTCCATAAT 71443 |||| || || || || || || |||| ||||||||| || ||||| || ||||| | Sbjct 635 ATGTTTCATAAGGACCCAATTCTTGAGCTAATTCACAACTAGCTTCTAAGGCGCCATAGT 694 Query 71444 AAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCCGGGCTATCAAATGGATAAT 71503 |||| ||||| ||||| | | || | || ||||| ||| ||| | ||| || Sbjct 695 AAATAGTTTCAAAAATTTGTTGGTTCAATAATTTAGCTTCTTTGCTTTCATAAGGAAAAC 754 Query 71504 TTAAGAGAATAAACGCGTCTGCTAATCCTTGAACGCCAATACCGATAGGTCTGTGTCTCT 71563 | || ||||| || || || | ||| || || ||||| || || ||||| || | Sbjct 755 GCATTAGTATAAAAGCATCAGCAAGTCCCTGTACCCCAATTCCAATTGGTCTATGCCGTA 814 Query 71564 TATTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGAT 71623 ||| || ||| |||||| || | |||||||||||| | ||||||||||||||| | || Sbjct 815 AATTTGATTTTTTAGCTTCGGGGACAGGATAATAATTTACATCTATAATTTTATTTAAAT 874 Query 71624 TTCTGACTATTACTTTGACCACATCCTTTAGTTTGAGAAAATCAAATCTCCCATCTATTA 71683 || | ||| | ||| |||| |||| ||| || ||||| | ||| | | Sbjct 875 TTTTCGTTATAATTTTTGAAACATGTTTTAATTTATTGAAGTCAAAGGTTTTATCC-TGA 933 Query 71684 CAAAC--ACGT-TCAAG-GCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCG 71739 |||| || | | ||| || | ||| |||| |||||| || || | |||| | Sbjct 934 GAAACGAACATATTAAGAGCTATAGACGCCAAATTACATACAGCAATTTCATCTGGCGAA 993 Query 71740 GCATATTGTATAATTTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGA 71799 | ||| | | |||||||||||| | |||||| || || ||||| | |||||| ||| Sbjct 994 GAATACTCCACAATTTCAGTGCATAAATTACTGCAACGAATTGTTCCCACATTTTGCTGA 1053 Query 71800 TTACTCTTTTTGTTACACGCATCCTTATAAAGAATAAACGGAGTACCAGTTTCAATCTGA 71859 || || ||| | ||||| ||||| || || || || | || || || || |||| ||| Sbjct 1054 TTGCTTTTTCTATTACAAGCATCTTTGTATAGCATGTAAGGTGTTCCTGTCTCAACCTGT 1113 Query 71860 GATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATATTCTTGTATCTCTTTTCT 71919 || || ||||| || ||| | | | ||||||||| | || || ||| ||| Sbjct 1114 GACTCAATAATTGCAAACCAAAGTGTTTGTGCCTTTATTTTTTTATTAGCTCTACCCTCT 1173 Query 71920 CTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAGCATTGTCTAATCCAGGA 71979 |||| |||| ||||||||| |||||| || || ||||| ||| || ||| || || Sbjct 1174 TTTTCATATTTAGTATATAATTCTTCGAATTCCTCACCCCATACATCGTGTAAACCTGGG 1233 Query 71980 CATTCATTCGGACACATCAATGACCACTCTCCATCATC--ATT-TACTCGTTTCATAAAG 72036 || | || || ||||| || ||||| | |||| || ||| |||| ||||||||| Sbjct 1234 CACTTATGTGGGCACATTAAAGACCA---TTCATCGTCGGATTCAACTCTTTTCATAAAC 1290 Query 72037 AGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTA 72096 | ||| || ||||| | ||| ||| |||||||||| || ||||| ||||| ||| Sbjct 1291 AAATCTGGTATCCACAAAGCATAAAACAGATCTCTGGCTCGTGTTTCCTCTTTTCCAGTA 1350 Query 72097 TTCTT-TTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGC 72155 ||||| |||||| || | || | | |||||||||||||| ||||| | ||||| || Sbjct 1351 TTCTTCTTTAAG-TCTAAAAATTCAAGTATATCAGAATGCCATGGTTCTAGATATATTGC 1409 Query 72156 CATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAAC 72215 | | |||| |||| ||| ||||| || || || | ||||| ||| ||||| |||| Sbjct 1410 AAAAGCTCCTGGCCTTTTATTTCCACCTTGGTCAACGTATCGAGCAACATTATTGAAAAC 1469 Query 72216 TCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACT 72275 ||||||||| || | | || || || | ||||| || || | || |||| | Sbjct 1470 TCTCAACATAGGTACTAAGCCGTTAGAAACCCCATTTGTACCAGCAATTGTTGTTCCTGT 1529 Query 72276 GGCACGAATA 72285 ||||||||| Sbjct 1530 TGCACGAATA 1539 >seq139863 Length=2592 Score = 389 bits (430), Expect = 5e-103 Identities = 534/743 (72%), Gaps = 5/743 (1%) Strand=Plus/Plus Query 41857 AACATTATAAAtttttttAAATCCCAATTCAGAAATCAATCTATCTGCGATGAATTCTAT 41916 |||||| || ||| | || ||||||||| | |||| || || | ||||| || Sbjct 1279 AACATTTTAC--TTTATCAACTCCCAATTCTCTCAATAATCGGTCAGCAACAAATTCAAT 1336 Query 41917 ATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAG 41976 |||| ||| | | |||||||| || || | || || || | || |||| | Sbjct 1337 ATATTGCGACATTAAATTGCAATTCATACCAATTAAATTTACAGGTAATGCGTCAGTTAA 1396 Query 41977 AAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATAGATCTTACTGTTTCTTCACTCGG 42036 ||||||||||||||| || || || | |||||| | | | |||||| ||| || Sbjct 1397 AAATTCTTGTTCAATTTTCACTGCTTCAGATATAATTTCAATAATTCTTTCTTTACTTGG 1456 Query 42037 TGGATACAATAAATGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCT 42096 | | | ||||||||||||||| |||||||| ||||| || || | || |||||||| Sbjct 1457 TTTTTGTATTAAATGTTTAAACATTAAACATGCAAAATCACAATGTAATCCTTCATCTCT 1516 Query 42097 ACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAA 42156 ||||| ||| || ||||| || | ||| ||||| |||||||| ||||| | |||||| Sbjct 1517 TGAAATTAGTTCATTTGAAAATGTTAATCCTGGCATAAGGCCACGTTTTTTTAACCAAAA 1576 Query 42157 TATAGACGCAAATGATCCAGAAAAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCT 42216 ||| || ||||| ||| |||||| |||||||| ||||| ||||| ||||||| | Sbjct 1577 TATTGATGCAAAACTACCACTAAAGAATATTCCTTCAACTGCTGCAAAAGCAATAATACG 1636 Query 42217 CTCTCCATAACCGGC--ACTGTCATGT-ATCCACTTTTGAGCCCAATCGGCCTTCTTTTT 42273 ||||||||| || | | | ||| ||||| | | |||||||| || || ||||| Sbjct 1637 TTCTCCATAATTAGCTGATTTACTTGTTATCCAATCTAATGCCCAATCAGCTTTTTTTTT 1696 Query 42274 TACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAAC 42333 ||||| || | ||||| || |||||||| || | | | |||| || ||| || | Sbjct 1697 AACACATGGTAATGTTTCAATTGCATTAAAAAGGAAATCTCTTTCTTTTGGATCCTTTAT 1756 Query 42334 ATATGTATCGATCAAAAGACTATACATTTCTGAATGAATGTTTTCAATGGCCATCTGAAA 42393 ||||||||| || |||| || |||||||| ||||||| ||||| || || || ||||| Sbjct 1757 ATATGTATCAATTAAAATGCTGTACATTTCGGAATGAACATTTTCCATAGCTATTTGAAA 1816 Query 42394 TCCGTAGAAACATCTGGCCTCGGTAACCTGTACTTCTGTACAAAATCGTTCAGCTAAATT 42453 ||| || ||||| | || || || || || |||||| || ||| |||||| | | ||| Sbjct 1817 TCCATAAAAACAACGCGCTTCAGTTACTTGAACTTCTTGACTAAAACGTTCAACAAGATT 1876 Query 42454 TTCGTTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTT 42513 |||||| ||||| || || || |||||||| || || |||||| ||| |||| Sbjct 1877 TTCGTTAACTATACCATCTGAAGCAGCAAAAAATGCTAAAACATGTGATATGAAATGACG 1936 Query 42514 TTCGTCCGGTGTTAATTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCTAC 42573 ||| | | |||||||| ||||| || | ||||| || |||| ||| ||||| || || Sbjct 1937 TTCTCCAGAAGTTAATTTGTTCCAGTCCGTCATATCCTTTGATAAATCAACTTCCTCAAC 1996 Query 42574 CGTCCAAAATGATGCTTCTGCCT 42596 ||||||||| |||||||| |||| Sbjct 1997 CGTCCAAAAAGATGCTTCAGCCT 2019 >seq105373 Length=2707 Score = 343 bits (380), Expect = 2e-89 Identities = 711/1054 (67%), Gaps = 21/1054 (2%) Strand=Plus/Plus Query 71114 TTAAAACTCTAAGGAGATGAGGATTAACTACTTGAAATTCTCCAGACAATACTCTACGAG 71173 ||||| || ||| | ||| ||||||||||||||||||| ||||| | |||| | | Sbjct 46 TTAAATCTTTAATTAAGTGATGATTAACTACTTGAAATTCACCAGAAAGAACTCGTCTAT 105 Query 71174 TGTAAATATTACTGGTATACGGTTCCACTGACTCATTATTTCCCAAAATTTGAGCAGTTG 71233 |||| ||||| |||||||| || | || || ||||| || |||||||| ||||| | Sbjct 106 TGTATATATTTGAAGTATACGGCTCAAAAGATTCGTTATTACCTAAAATTTGTGCAGTAG 165 Query 71234 ATGCAGTCGGCATAGGTGCCACCAATAGACTATTTCTAAGACCATGTGATCGGATTTTAT 71293 |||| || |||||||| || | |||||| ||| | | |||||| |||||| | Sbjct 166 ATGCGGTTGGCATAGGGGCAATCAATAGTGAATTCCGGACGCCATGTTTAGCGATTTTTT 225 Query 71294 CTTTTAG---AGATTCCCAATTCCAAAGATCCGATGGTACAACNNNNNNNNNNNNNNNNN 71350 |||||| ||| ||||| ||| | |||| ||| Sbjct 226 CTTTTAAGTCAGA---CCAATCCCACAAGTCCGTGGGTGTTTTATTCCACATATCATACT 282 Query 71351 NNNNNATGCCGTTACTAGCGTATGATCCTGCATATGTATCGTATGGTCCTTCTTTTTCGG 71410 || || ||||| | || || ||| || || |||| || | |||||| | Sbjct 283 GCAAAATACCTTTACTTACAGGCGAACCGTTATAGGTTTCATATGAACCATATTTTTCCG 342 Query 71411 CTAGTTCACAACTCGCCTCTAATGCTCCATAATAAATGGTTTCGAAAATCTTCTTATTGA 71470 ||| |||||||| || || || || || || ||||| ||||| ||||||| | ||| | Sbjct 343 CTAACTCACAACTGGCTTCCAAAGCACCGTAGTAAATTGTTTCAAAAATCTGTTGATTCA 402 Query 71471 GATCTTGT-GCTTCCGGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAAT 71529 || | | ||||| || ||| | |||||| || || ||||| ||||| || ||| Sbjct 403 -ATAATCTAGCTTCTTTACTTTCATAAGGATAACGCAATAGGATAAAAGCGTCCGCCAAT 461 Query 71530 CCTTGAACGCCAATACCGATAGGTCTGTGTCTCTTATTAGAAATTTCAGCTTCTGGAATA 71589 |||||||| ||||| || || |||| || || |||||| ||| ||| ||||||| Sbjct 462 CCTTGAACTCCAATTCCAATTGGTCGATGCCTAAAATTAGATTTTTTAGCCTCTGGAAGT 521 Query 71590 GGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACTATTACTTTGACCACATCC 71649 || ||||| || | ||||||||||||||| | |||||| ||| | |||| |||| Sbjct 522 GGGTAATAGTTTACATCTATAATTTTATTCAAATTTCTTGTTATAATTTTGGAAACATTT 581 Query 71650 TTTAGTTTGAGAAAATCAAATCTCCCAT---CTATTACAAACACGTTCAAGGCAACAGAT 71706 || | || | ||||||||| | |||| || ||||||| || | |||| |||| Sbjct 582 TTCAATTCAATAAAATCAAACTTTCCATTTGGTAACACAAACATATTTAGAGCAATAGAT 641 Query 71707 GCCAGATTACAAACGGCTACCTCATTAGCATCGGCATATTGTATAATTTCAGTGCAAAGA 71766 |||| ||| |||||||| | |||| | | | ||||| | |||||| || || | | Sbjct 642 GCCAAATTGCAAACGGCAATTTCATCTGAACAAGAATATTCCACAATTTCTGTACACAAA 701 Query 71767 TTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTA 71826 || || || || ||||| | ||||| ||||||||| || ||| || | || || Sbjct 702 TTGCTGCAACGAATTGTTCCAAGATTTTTTTGATTACTTTTACGGTTGCAAGTGTCTTTG 761 Query 71827 TAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACT 71886 || | ||| | ||| |||||||||||| |||| ||| | || ||| | || Sbjct 762 TACATTATATATGGATTACCAGTTTCAACTTGAGCTTCAACTATACTAAACCACAACGCT 821 Query 71887 CGAGCCTTTATTATATTCTTGTATCTCT--TTTCTCTTTCGTATTGT--GTATATAATCG 71942 |||||||| | |||| | ||| | || ||| |||| |||| | ||| | | | Sbjct 822 CGAGCCTTAA--CTATTTTAGTAGCCCTACCTTCGTTTTCATATTTTTCGTACAGATT-- 877 Query 71943 TTCGAACTCGTCTCCCCAAGCATTGTCTAATCCAGGACATTCATTCGGACACATCAATGA 72002 || ||| || || ||||| ||| | || || ||||| | | |||||||| || || Sbjct 878 TTTGAATTCATCACCCCAGACATCGAACAAACCCGGACACTTGTGTGGACACATTAAAGA 937 Query 72003 CCACTCTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-A 72061 ||| || |||| || | || |||| |||||| | ||| |||||||| | | | ||| | Sbjct 938 CCAATCACCATTATTTTCTAAGCGTTCCATAAATAAATCTGGAATCCATA-ACCCATAGA 996 Query 72062 ATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCA 72121 | |||||||| | | | || || ||||| ||||| ||||| | ||| | || | | Sbjct 997 AGAGATCTCTTGCACGAATTTCTTCTTTTCCGGTATTTTTTTTCAAATCTAAAAATTCAA 1056 Query 72122 TAATATCAGAATGCCACGGTTCCAAGTATATGGC 72155 ||||| | |||||||||||| || || || || Sbjct 1057 ATATATCTGCATGCCACGGTTCTAAATAAATTGC 1090 >seq1919 Length=1291 Score = 107 bits (118), Expect = 3e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 72466 GACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGTATTCCTACCGCG 72525 || || | ||| || || |||||||| || || || | |||||| || ||||| Sbjct 1 GAGAGCAAATTATATGTTTCAATAGCACTCTCAATGTCATCTCCATGTATGCCCACCGCT 60 Query 72526 ACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAG 72585 || | ||| | ||| || || ||||||||| | || || |||||| ||| || | || Sbjct 61 ACTCTCATAAGCATGTGTTGCGGTCTTTCAGCTATTTTCCTATTTACTTTTAAGAGATAT 120 Query 72586 GATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATA 72645 || ||||| ||||||||||||||||| |||||| ||| || || || || ||||| Sbjct 121 GAACGCTCCAATGTTTTAAAACCAAAATAATTGTATCCAAAATCCCGATCATATATAATT 180 Query 72646 ACCGAATTGAGTTTATC 72662 | ||||| |||||||| Sbjct 181 GCAGAATTTAGTTTATC 197 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 669366410970920