Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq52608 95.1 2e-14 >seq52608 Length=2757 Score = 95.1 bits (104), Expect = 2e-14 Identities = 219/331 (66%), Gaps = 12/331 (4%) Strand=Plus/Plus Query 127256 CATCGGCAATCTCTCGGAATCGTCTATAGTCCAAGCGCCGAGGATAGCAACTGGTGCCGG 127315 ||||| ||| | ||| |||| | ||| || || | |||| ||| || |||| Sbjct 2336 CATCGCAAATTTTTCGAAATCTTTCATAATCTAAACAACGAGAATAACATGAAACACCGG 2395 Query 127316 CTATGATTAGCCTAGGTTTGAATAGATTGGCACTCTCGGCAAGTTTGGCATAGTCGACGA 127375 | || |||| | ||||| |||| || ||| | || | | ||| | || || | | Sbjct 2396 CAATAATTAATTTTGGTTTAAATAATTTAGCATTTTCTTCTAATTTATCGTAATCAATTA 2455 Query 127376 GTCCAGTCTGAGGATCCACCTTGTACGGCATGCTTTCGAAAAAGAGTGATGTAGCGGACA 127435 |||||| | |||| || || || ||||||||||||||||| | ||| || || || | Sbjct 2456 TTCCAGTTTTCGGATTAACTTTATATGGCATGCTTTCGAAAAATATTGAAGTTGCTGAAA 2515 Query 127436 -------CGTTGCGG-----AATCCGTGCGTCAGGTGGCCTCCGTCGGGCAGATCGAGTC 127483 |||||| | ||||| || || | ||| || || || || | ||| |||| Sbjct 2516 TTCTTTTCGTTGCTGTCATAAATCCATGTGTTAAGTGACCACCATCTGGTAAATCAAGTC 2575 Query 127484 CCATGATTCTACCGTGCGGTTTAACGATTCCAGTGTACACGGCAAAGTTGGCCATCGAGC 127543 |||| || | ||| || |||| | || |||| || || ||||| || || ||| | Sbjct 2576 CCATAATACGACCATGTGGTTCACATATGGCAGTATAAACAGCAAAATTAGCTGGCGAAC 2635 Query 127544 CCGAGTACGGTTGTACACACACTCCCCATTC 127574 | || || ||||| ||| || |||||||| Sbjct 2636 CAGAATATGGTTGAACATTGACACCCCATTC 2666 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 739101719912920