Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq211115 154 2e-32 seq107941 145 9e-30 >seq211115 Length=3236 Score = 154 bits (170), Expect = 2e-32 Identities = 287/418 (69%), Gaps = 5/418 (1%) Strand=Plus/Minus Query 6726 AAAATCTTCAAATTTAAAATCACATAAATTATCAGACtttttttttAATATTACAACAGG 6785 || ||||||||||||||||||| |||| | | ||| ||||| | | | || Sbjct 938 AATATCTTCAAATTTAAAATCAAATAACGAAGTAATGGTTTGATTTAACTTCAAAGTTGG 879 Query 6786 TGAAGGTTTTATTGATCGAGTTAATTGTTCTTTTATAGCTTTTATATGATCTAAATAAAT 6845 | | || || || |||||||||||||| || || | ||||| | |||||| Sbjct 878 TAATTTTTGCGGAGAACGTGTTAATTGTTCTTTAATTTGATTAAAATGATTTTTATAAAT 819 Query 6846 ATGAGCATCTCCTAGCGTATGAATAAATTCACCTGGTTTCATATCAACAGCTTGAGCAAT 6905 |||| |||||||| ||||| | ||| || || || | | ||||| |||| ||||| Sbjct 818 ATGACAATCTCCTAAAGTATGGACAAAATCGCCAACATTTAAACCAACAACTTGGGCAAT 759 Query 6906 TAAATATGTTAATAATGCATAAGAAGCTACATTAAAAGGTACACCTAATCCCATATCTGC 6965 ||||| |||||||| |||||| || | ||||||||| || ||||| | ||| || Sbjct 758 TAAATGGGTTAATAAAGCATAACTTGCGATATTAAAAGGGACTCCTAAAAAAACATCCGC 699 Query 6966 TGATCTTTGATAACATTGACAAGATAAAATATTGTCTAT---AGCATAAAATTGACACAA 7022 | |||||| |||||||| ||| |||| ||| | | ||||||| ||| || Sbjct 698 ACTACGTTGATATAATTGACAACTTAATTTATTATCTTTTGAAACATAAAACTGAATTAA 639 Query 7023 TACATGACATGGAGGTAAAACAGCCTGATCTATATCAGATGGATTCCAAGCAGTCATTAA 7082 ||||||||| |||||| | || ||| | || | |||||| |||||| | || | Sbjct 638 AGTATGACATGGTGGTAAAGCCATCTCATCAACTTCTGCTGGATTTCAAGCACTAATAAT 579 Query 7083 AATACGTCTATCATTTGGATT-TGTTTTTAATTTTGTTATAATTATTTGTAATTGATC 7139 | ||| | || |||||| | |||| |||||| | |||||| || ||| ||||| Sbjct 578 ATGACGACGTGAATATGGATTCTTTTTTAAATTTTCTAATAATT-TTGCTAACTGATC 522 >seq107941 Length=6085 Score = 145 bits (160), Expect = 9e-30 Identities = 220/310 (71%), Gaps = 6/310 (2%) Strand=Plus/Plus Query 164393 ATTGGAATTTTGAAGAAATGGGAGTAGGTGGACTAGATCGAGAATTTTCTCTTATTTTCA 164452 ||||| |||||| | ||||||| | || || | ||| |||||| | ||||||| Sbjct 3566 ATTGGGATTTTGGAAAAATGGGCATCGGAGGTTTGGATAAGGAATTTAATGCTATTTTCC 3625 Query 164453 GACGAGCATTTGCTTCTAGATCAGTTCCTATCGAAATAATaaaaaaaTTAGGCTGTAAAC 164512 |||| || ||||| ||| || | |||| ||||| || | |||| || ||||| | Sbjct 3626 GACGTGCTTTTGCCTCTCGAGTATTTCCACCAGAAATTATTGAGCAATTGGGATGTAAGC 3685 Query 164513 ATATAAAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAACATTAATGGCTCGAT 164572 | | ||||| ||||||||| |||| || || || |||||||| |||||||| || Sbjct 3686 ACGTCAAAGGGATTTTATTATATGGTCCACCAGGAACAGGTAAAACTTTAATGGCACGGC 3745 Query 164573 GCATTGCTCAAGCTTTTAAAT---CGCGACCCGTTAAAATTGTTAATGGTCCTGAATTAT 164629 |||| ||| | || ||| || || || |||||||| ||||||||| || | | Sbjct 3746 AAATTGG-CAACATGTTGAATTCACGTGAGCCA--AAAATTGTCAATGGTCCTCAAATTT 3802 Query 164630 TGAACAAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGTTGTTTCAGGAGGCTGAAG 164689 || |||||||||| ||||| || |||||||||||| | ||||| || || || | Sbjct 3803 TGGACAAATATGTTGGTGAATCTGAAGCTAATGTTCGCCGTCTGTTTGCTGAAGCCGAGG 3862 Query 164690 AAGAACAAAA 164699 ||||| |||| Sbjct 3863 AAGAAGAAAA 3872 Score = 109 bits (120), Expect = 7e-19 Identities = 117/155 (75%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 164785 CATGATGCAGTGGTTAATCAGTTGCTTTCTAAAATAGATGGTGTAGAATCCTTAAATAAT 164844 |||||| | || || ||||| | || | ||||| |||||||| ||| | |||||| Sbjct 4100 CATGATACTGTAGTAAATCAACTACTAGCAAAAATTGATGGTGTTGAACAACTTAATAAT 4159 Query 164845 ATTTTAATTGTAGGTATGACCAACCGACCTGATTTAATTGATGATGCTTTATTACGACCT 164904 ||| || | | |||||||| || ||| |||| | |||||||| |||||| | |||||| Sbjct 4160 ATTCTAGTCATTGGTATGACAAATAGACGTGATATGATTGATGAGGCTTTACTTCGACCT 4219 Query 164905 GGTCGATTAGAATTGAAAATAGAAATAGGATTACC 164939 |||||||||||| | |||| ||||| | ||||| Sbjct 4220 GGTCGATTAGAAGTACAAATGGAAATCAGTTTACC 4254 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 594298026457200