Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq197320 122 5e-23 seq134195 111 8e-20 seq79777 111 8e-20 seq75202 111 8e-20 seq181594 109 3e-19 >seq197320 Length=1522 Score = 122 bits (134), Expect = 5e-23 Identities = 80/89 (90%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 11441 AATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500 || ||||||| |||||||||||| |||||||||| ||||||||||||||||||||| Sbjct 826 AAAAAAAAATTGAATTGGCCCATGGGAGGATCGAACTCACGACCTTCGCGTTATTAGCAC 885 Query 11501 GACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||| |||||||||||||||||||| Sbjct 886 GACGCTCTAACCAACTGAGCTAATGGGCC 914 >seq134195 Length=2203 Score = 111 bits (122), Expect = 8e-20 Identities = 69/75 (92%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 11455 TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAA 11514 |||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||| Sbjct 1254 TTGGCCCATGGGAGGATCGAACTCACGACCTTCGCGTTATTAGCACGACGCTCTAACCAA 1313 Query 11515 CTGAGCTAATGGGCC 11529 ||||||||||||||| Sbjct 1314 CTGAGCTAATGGGCC 1328 >seq79777 Length=3077 Score = 111 bits (122), Expect = 8e-20 Identities = 69/75 (92%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 11455 TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAA 11514 |||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||| Sbjct 1414 TTGGCCCATGGGAGGATCGAACTCACGACCTTCGCGTTATTAGCACGACGCTCTAACCAA 1473 Query 11515 CTGAGCTAATGGGCC 11529 ||||||||||||||| Sbjct 1474 CTGAGCTAATGGGCC 1488 >seq75202 Length=2416 Score = 111 bits (122), Expect = 8e-20 Identities = 69/75 (92%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 11455 TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAA 11514 |||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||| Sbjct 2291 TTGGCCCATGGGAGGATCGAACTCACGACCTTCGCGTTATTAGCACGACGCTCTAACCAA 2350 Query 11515 CTGAGCTAATGGGCC 11529 ||||||||||||||| Sbjct 2351 CTGAGCTAATGGGCC 2365 >seq181594 Length=2163 Score = 109 bits (120), Expect = 3e-19 Identities = 68/74 (92%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 ||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 1324 TGGCCCATGGGAGGATCGAACTCACGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 1383 Query 11516 TGAGCTAATGGGCC 11529 |||||||||||||| Sbjct 1384 TGAGCTAATGGGCC 1397 Lambda K H 0.639 0.410 0.921 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 260817748781092