Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_006883.2 Length=252401 Score E Sequences producing significant alignments: (Bits) Value seq4317 93.3 7e-14 >seq4317 Length=2328 Score = 93.3 bits (102), Expect = 7e-14 Identities = 159/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 193647 GAGATCTATAATCTTGGTGCTCAAAGTCATGTTAAAGTTTCCTTTGAGATGCCAGAGTAT 193706 ||||| |||||| | | ||||||||| |||||||||||||| ||||| || || ||| Sbjct 414 GAGATATATAATTTAGCTGCTCAAAGCCATGTTAAAGTTTCTTTTGATTTGAGCGAATAT 355 Query 193707 ACTTCTAATGTTGATGCTTTAGGAACTCTTAGAATACTTGAAGCAGTTCGTATGTTGGGA 193766 ||| || | ||||| || | |||||||||||||| | || ||| || | | | ||| Sbjct 354 ACTGCTGAGGTTGACGCGGTTGGAACTCTTAGAATTTTAGATGCAATTAGAACATGCGGA 295 Query 193767 ATGGAGAAAGATGTTCGCATCTATCAGGCATCTACCAGCGAACTGTATGGTGGTGTTCTA 193826 || || ||| ||| | ||||| || || || ||| | ||||| || | Sbjct 294 ATAGAAAAAACTGTGAAATTTTATCAAGCTTCGACATCTGAATTATATGGAAAAGTGGTT 235 Query 193827 GGCACTCCACTATCAGAAACCACACCATTTCATCCACGCTCTCCTTATGGT 193877 | || || | | |||| || || ||| | || || |||||||||||| Sbjct 234 GAAACGCCCCAAAATGAAAAGACGCCTTTTTACCCCCGATCTCCTTATGGT 184 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 805422073222520