Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq210017 443 3e-119 seq139863 361 7e-95 seq105373 352 4e-92 seq1919 95.1 2e-14 >seq210017 Length=1697 Score = 443 bits (490), Expect = 3e-119 Identities = 1011/1511 (67%), Gaps = 28/1511 (2%) Strand=Plus/Plus Query 61986 TTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCC 62045 || || | |||||| ||||| | | | || ||||| || | || ||| |||||||| Sbjct 40 TTATCTACTGTGAACTGAATAGCATTTGCAGCAGGTTTTGTTCTTAAATAATACATTCCA 99 Query 62046 GTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGA 62105 |||||||| || |||| | |||||||| || || | ||| ||| |||| Sbjct 100 GTTTTTAGTCCAGCTTTCCAAGCATAAAAATGAATTGAAGTCAATTTACCATAGTTCGGT 159 Query 62106 TCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCC 62165 || || | ||| ||||| | |||||||||||||| || || ||||| | || ||| Sbjct 160 TCAGCCACATGAATATTAAATGATTGACTTTGATCAATAAAAGCTCCACGATCACAAGCA 219 Query 62166 ATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATC 62224 | ||| | || | | |||||||| | || ||||| || || |||| ||| Sbjct 220 TAATCTATTGTACTCCTAACAGATATTTCCCATACCGTCTTATACAAATCTCTTA-TATT 278 Query 62225 TTCTGGAAGGTTTG---TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGAT 62281 || |||| ||| |||| ||||| || |||| || || || || || || || Sbjct 279 TTGAGGAATCTTTTCAATATTTTGAATAGACCCACGATTTGAAATGATTAAGTTTTTCAT 338 Query 62282 CTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTG 62341 ||||||| ||| || | | || || | | || | | | ||| ||||||| | ||| Sbjct 339 ATCATCATCCCACAAATCTAGTTCTGTAAGATCTTTTAACAAATGATGATTAACAATTTG 398 Query 62342 AAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTC 62401 ||||| ||||| || || | ||| | || ||||| || || ||||| | || || Sbjct 399 GAATTCACCAGATAAAACCCGGCGATTATATATATTTGATGTGTATGGTTCAAATGATTC 458 Query 62402 ATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATT 62461 ||| || ||||||||||| || |||||||| || ||||| ||||| | ||||| ||| Sbjct 459 ATTGTTACCCAAAATTTGTGCGGTTGATGCTGTTGGCATTGGTGCAATTAATAACGAATT 518 Query 62462 TCTAAGACCGTATGTTCTG--ATTTTATCTTTTAGAGGTTC---CCAATTCCAAAGATCC 62516 || || ||| ||||| | |||||||| |||| ||| ||||| ||| | || Sbjct 519 TCGAACACC--ATGTTGAGCAATTTTATCCTTTAA---TTCAGACCAATCCCATAAATTT 573 Query 62517 GACGGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACA 62576 | || | ||||| |||||| ||||| | || ||| || Sbjct 574 GTTGGGATTTTATTCCACATGTCATATTGTAAAATACCCTTACTTACAGGGGAGCCTTCA 633 Query 62577 TATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAA 62636 ||||| || || || || | | ||||| ||||||||| || ||||| || || || Sbjct 634 TATGTTTCATAAGGACCCAATTCTTGAGCTAATTCACAACTAGCTTCTAAGGCGCCATAG 693 Query 62637 TAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGT-GCTTCCAGGCTATCAAATGGATA 62695 ||||| ||||| || || || || || || | | ||||| ||| ||| | ||| | Sbjct 694 TAAATAGTTTCAAAAAT-TTGTTGGTTCAATAATTTAGCTTCTTTGCTTTCATAAGGAAA 752 Query 62696 ATTTAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCT 62755 | | || ||||| || || || | ||| || || ||||| || || |||||||| | Sbjct 753 ACGCATTAGTATAAAAGCATCAGCAAGTCCCTGTACCCCAATTCCAATTGGTCTATGCCG 812 Query 62756 CTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAG 62815 ||| || ||| |||||| || | |||||||||||| | ||||||||||||||| | Sbjct 813 TAAATTTGATTTTTTAGCTTCGGGGACAGGATAATAATTTACATCTATAATTTTATTTAA 872 Query 62816 ATTTCTG---ACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGCCCATC 62872 |||| | | |||| ||||| |||| || | ||| || ||||| ||| Sbjct 873 ATTTTTCGTTATAATT--TTTGAA-ACATGTTTTAATTTATTGAAGTCAAAGGTTTTATC 929 Query 62873 TATT---ACAAACATGTTCAAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGC 62929 || ||||| || | || | ||| |||| |||||| || || | |||| | Sbjct 930 CTGAGAAACGAACATATTAAGAGCTATAGACGCCAAATTACATACAGCAATTTCATCTGG 989 Query 62930 ATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTG 62989 | ||| | | || |||||||| | |||||| || || ||||| | |||||| Sbjct 990 CGAAGAATACTCCACAATTTCAGTGCATAAATTACTGCAACGAATTGTTCCCACATTTTG 1049 Query 62990 TTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAAT 63049 ||||| || ||| | ||||| ||||| || || || ||| | || || || || |||| Sbjct 1050 CTGATTGCTTTTTCTATTACAAGCATCTTTGTATAGCATGTAAGGTGTTCCTGTCTCAAC 1109 Query 63050 CTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCTCCT 63109 ||| || || ||||| || ||| | | | ||||||||| | || ||| | Sbjct 1110 CTGTGACTCAATAATTGCAAACCAAAGTGTTTGTGCCTTTATTTTTTTATTAGCTCTACC 1169 Query 63110 TTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCC 63169 ||| |||| ||| ||||| ||| |||||| || || ||||| |||| || || || Sbjct 1170 CTCTTTTTCATATTTAGTATATAATTCTTCGAATTCCTCACCCCATACATCGTGTAAACC 1229 Query 63170 AGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAA 63229 || || | || || ||||| || ||||| || |||| | |||| ||||||||| Sbjct 1230 TGGGCACTTATGTGGGCACATTAAAGACCATTCATCGTCGGATTCAACTCTTTTCATAAA 1289 Query 63230 GAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGT 63289 | ||| || ||||| | ||| ||| |||||||||| || |||||| ||||| || Sbjct 1290 CAAATCTGGTATCCACAAAGCATAAAACAGATCTCTGGCTCGTGTTTCCTCTTTTCCAGT 1349 Query 63290 ATTCTT-TTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGG 63348 |||||| |||||| || | || | | |||||||||||||| ||||| | ||||| | Sbjct 1350 ATTCTTCTTTAAG-TCTAAAAATTCAAGTATATCAGAATGCCATGGTTCTAGATATATTG 1408 Query 63349 CCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAA 63408 | | | |||| |||| ||| ||||| || || || | ||||| ||| ||||| ||| Sbjct 1409 CAAAAGCTCCTGGCCTTTTATTTCCACCTTGGTCAACGTATCGAGCAACATTATTGAAAA 1468 Query 63409 CTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCAC 63468 |||||||||| || | | ||||| || | ||||| ||||| | || |||| Sbjct 1469 CTCTCAACATAGGTACTAAGCCGTTAGAAACCCCATTTGTACCAGCAATTGTTGTTCCTG 1528 Query 63469 TGGCACGAATA 63479 | ||||||||| Sbjct 1529 TTGCACGAATA 1539 >seq139863 Length=2592 Score = 361 bits (400), Expect = 7e-95 Identities = 529/743 (71%), Gaps = 5/743 (1%) Strand=Plus/Plus Query 33096 AACATTATAAAtttttttAAATCCCAATTCAGAAATCAATCTATCCGCGACGAATTCTAT 33155 |||||| || ||| | || ||||||||| | |||| || || || ||||| || Sbjct 1279 AACATTTTAC--TTTATCAACTCCCAATTCTCTCAATAATCGGTCAGCAACAAATTCAAT 1336 Query 33156 ATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCGCAGTAAG 33215 |||| ||| | | |||||||| || || | || || || | || |||| | Sbjct 1337 ATATTGCGACATTAAATTGCAATTCATACCAATTAAATTTACAGGTAATGCGTCAGTTAA 1396 Query 33216 AAATTCTTGTTCAATGGATACCGCATCTGTTATAATAGATCTAACGGTTTCTTCACTCGG 33275 ||||||||||||||| || || || | |||||| ||| |||||| ||| || Sbjct 1397 AAATTCTTGTTCAATTTTCACTGCTTCAGATATAATTTCAATAATTCTTTCTTTACTTGG 1456 Query 33276 TGGATGCAATAAATGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCT 33335 | || | ||||||||||||||| |||||||| ||||| || || | || || ||||| Sbjct 1457 TTTTTGTATTAAATGTTTAAACATTAAACATGCAAAATCACAATGTAATCCTTCATCTCT 1516 Query 33336 ACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAA 33395 ||||||||| || ||||| || | ||| ||||| |||||||| ||||| | |||||| Sbjct 1517 TGAAATTAGTTCATTTGAAAATGTTAATCCTGGCATAAGGCCACGTTTTTTTAACCAAAA 1576 Query 33396 TATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCT 33455 ||| || || || ||| |||||| |||||||| ||||| ||||| ||||||| | Sbjct 1577 TATTGATGCAAAACTACCACTAAAGAATATTCCTTCAACTGCTGCAAAAGCAATAATACG 1636 Query 33456 CTCTCCATAACCGGC-GCTGT-CATG-TATCCACTTTTGAGCCCAATCGGCCTTCTTTTT 33512 ||||||||| || | | | | || |||||| | | |||||||| || || ||||| Sbjct 1637 TTCTCCATAATTAGCTGATTTACTTGTTATCCAATCTAATGCCCAATCAGCTTTTTTTTT 1696 Query 33513 TACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAAC 33572 ||||| || | ||||| || |||||||| || | | | |||| || ||| || | Sbjct 1697 AACACATGGTAATGTTTCAATTGCATTAAAAAGGAAATCTCTTTCTTTTGGATCCTTTAT 1756 Query 33573 ATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAA 33632 ||| ||||| || |||| || |||||||| ||||||| ||||| || || || ||||| Sbjct 1757 ATATGTATCAATTAAAATGCTGTACATTTCGGAATGAACATTTTCCATAGCTATTTGAAA 1816 Query 33633 TCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCCGCCAAATT 33692 ||| || ||||| | || || || | || |||||| || ||| ||||| | | ||| Sbjct 1817 TCCATAAAAACAACGCGCTTCAGTTACTTGAACTTCTTGACTAAAACGTTCAACAAGATT 1876 Query 33693 TTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTT 33752 ||| || ||||| || || || |||||||| || || |||||| ||| |||| Sbjct 1877 TTCGTTAACTATACCATCTGAAGCAGCAAAAAATGCTAAAACATGTGATATGAAATGACG 1936 Query 33753 TTCGTCTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCAC 33812 ||| | | |||| ||| ||||| || | ||||| || |||| ||| ||||| || || Sbjct 1937 TTCTCCAGAAGTTAATTTGTTCCAGTCCGTCATATCCTTTGATAAATCAACTTCCTCAAC 1996 Query 33813 TGTCCAAAATGATGCCTCTGCCT 33835 |||||||| ||||| || |||| Sbjct 1997 CGTCCAAAAAGATGCTTCAGCCT 2019 >seq105373 Length=2707 Score = 352 bits (390), Expect = 4e-92 Identities = 765/1139 (67%), Gaps = 17/1139 (1%) Strand=Plus/Plus Query 62308 TTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAG 62367 ||||| || ||| | || ||||||||||||||||||| ||||| | |||| | | Sbjct 46 TTAAATCTTTAATTAAGTGATGATTAACTACTTGAAATTCACCAGAAAGAACTCGTCTAT 105 Query 62368 TGTAAATATTACTGGTATACGGTTCCACCGACTCATTATTTCCCAAAATTTGAGCAGTTG 62427 |||| ||||| |||||||| || | || || ||||| || |||||||| ||||| | Sbjct 106 TGTATATATTTGAAGTATACGGCTCAAAAGATTCGTTATTACCTAAAATTTGTGCAGTAG 165 Query 62428 ATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTGATTTTAT 62487 |||| || |||||||| || | ||||| ||| | | || | | | |||||| | Sbjct 166 ATGCGGTTGGCATAGGGGCAATCAATAGTGAATTCCGGACGCCATGTTTAGCGATTTTTT 225 Query 62488 CTTTTAGAGGTTC---CCAATTCCAAAGATCCGACGGTACAACNNNNNNNNNNNNNNNTT 62544 |||||| || || ||||| ||| | |||| ||| | Sbjct 226 CTTTTA-AG--TCAGACCAATCCCACAAGTCCGTGGGTGTTTTATTCCACATATCATACT 282 Query 62545 GTAGAATACCGTTACTGGCGTACGATCCTACATATGTATCGTATGGTCCTTCCTTCTCAG 62604 | | |||||| ||||| | ||| || ||| || || |||| || | || || | Sbjct 283 GCAAAATACCTTTACTTACAGGCGAACCGTTATAGGTTTCATATGAACCATATTTTTCCG 342 Query 62605 CTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTA 62664 ||| |||||||| || || || |||||||| ||||| ||||| || |||| | ||| | Sbjct 343 CTAACTCACAACTGGCTTCCAAAGCACCGTAGTAAATTGTTTCAAAAATCTGTTGATTCA 402 Query 62665 GATCTTGT-GCTTCCAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCCGCTAAT 62723 || | | ||||| || ||| | |||||| || || ||||| |||||||| ||| Sbjct 403 -ATAATCTAGCTTCTTTACTTTCATAAGGATAACGCAATAGGATAAAAGCGTCCGCCAAT 461 Query 62724 CCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATA 62783 |||||||| ||||| || || |||| ||| || |||||| ||| ||| ||||||| Sbjct 462 CCTTGAACTCCAATTCCAATTGGTCGATGCCTAAAATTAGATTTTTTAGCCTCTGGAAGT 521 Query 62784 GGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACAATTACTTTGACCACATCC 62843 || ||||| || | ||||||||||||||| | |||||| || | |||| |||| Sbjct 522 GGGTAATAGTTTACATCTATAATTTTATTCAAATTTCTTGTTATAATTTTGGAAACATTT 581 Query 62844 TTCAGTTTGAGAAAATCAAATCGCCCAT---CTATTACAAACATGTTCAAGGCAACAGAT 62900 |||| || | ||||||||| |||| || |||||||| || | |||| |||| Sbjct 582 TTCAATTCAATAAAATCAAACTTTCCATTTGGTAACACAAACATATTTAGAGCAATAGAT 641 Query 62901 GCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGA 62960 |||| ||| |||||||| | |||| | | | ||||| | || || || || | | Sbjct 642 GCCAAATTGCAAACGGCAATTTCATCTGAACAAGAATATTCCACAATTTCTGTACACAAA 701 Query 62961 TTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTA 63020 || || || || ||||| | ||||| ||||||||| || ||| || | || || Sbjct 702 TTGCTGCAACGAATTGTTCCAAGATTTTTTTGATTACTTTTACGGTTGCAAGTGTCTTTG 761 Query 63021 TAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACT 63080 || | || ||||| |||||||||||| |||| ||| | || ||| | || Sbjct 762 TACATTATATATGGATTACCAGTTTCAACTTGAGCTTCAACTATACTAAACCACAACGCT 821 Query 63081 CGAGCCTTTATTATAGATTTGTA--TCTCCTTTCTCTTTCGTATAGTGTATACAATCGTT 63138 |||||||| | ||| || ||| || | ||| |||| ||| | |||| || Sbjct 822 CGAGCCTTAACTAT--TTTAGTAGCCCTACCTTCGTTTTCATATTTTTCGTACAGATTTT 879 Query 63139 CGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACC 63198 ||| || || ||||| |||| | ||| || ||||| | | |||||||| || |||| Sbjct 880 TGAATTCATCACCCCAGACATCGAACAAACCCGGACACTTGTGTGGACACATTAAAGACC 939 Query 63199 ACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AAT 63257 | || || | || | | |||| |||||| | ||| |||||||| | | | ||| || Sbjct 940 AATCACCATTATTTTCTAAGCGTTCCATAAATAAATCTGGAATCCATA-ACCCATAGAAG 998 Query 63258 AGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 63317 |||||||| | | | ||| || ||||| ||||| ||||| | ||| | || | | Sbjct 999 AGATCTCTTGCACGAATTTCTTCTTTTCCGGTATTTTTTTTCAAATCTAAAAATTCAAAT 1058 Query 63318 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCC 63377 ||||| | |||||||||||| || || || || | || || | ||| || | || Sbjct 1059 ATATCTGCATGCCACGGTTCTAAATAAATTGCAAATGAACCGGGTCTTTTATTAACACCT 1118 Query 63378 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGA 63436 || | | |||| || ||||| | || | | |||||||| ||| |||||||| Sbjct 1119 TGTCCAACAAATCTTGCTAAATTATTGAATACACGTAGCATTGGAACAATTCCGTTTGA 1177 >seq1919 Length=1291 Score = 95.1 bits (104), Expect = 2e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 63660 GAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCG 63719 || || | ||| || || |||||||| || || || | ||| || || || || Sbjct 1 GAGAGCAAATTATATGTTTCAATAGCACTCTCAATGTCATCTCCATGTATGCCCACCGCT 60 Query 63720 ACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAG 63779 || | ||| | |||||| || ||||||||| | || || | |||| ||| || | || Sbjct 61 ACTCTCATAAGCATGTGTTGCGGTCTTTCAGCTATTTTCCTATTTACTTTTAAGAGATAT 120 Query 63780 GATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATA 63839 || ||||| ||||||||||||||||| |||||| ||| || || || || ||||| Sbjct 121 GAACGCTCCAATGTTTTAAAACCAAAATAATTGTATCCAAAATCCCGATCATATATAATT 180 Query 63840 ACCGAGTTGAGTTTATC 63856 | || || |||||||| Sbjct 181 GCAGAATTTAGTTTATC 197 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 621301708331720