Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_007019.1 Length=34704 Score E Sequences producing significant alignments: (Bits) Value seq205685 102 2e-17 >seq205685 Length=35797 Score = 102 bits (112), Expect = 2e-17 Identities = 385/594 (65%), Gaps = 14/594 (2%) Strand=Plus/Minus Query 1505 AATCATGATTGGTTTATCTGTGGGCTTCATGGCGCTAAACGTGCTGGTAAGACTGTAGTT 1564 || || ||||||||||| ||| ||||| || || || | ||||| || | | Sbjct 21473 AAACAAGATTGGTTTATAACGTTGCTGCATGGAGCGAAGCGGTCAGGTAAAACGAAAATA 21414 Query 1565 AATAACGACACTTTCGTAACCGAGTTAAGCCGTGTCAGAAAGATTGCTGACTATTTAGGT 1624 ||||| ||| || | ||||||| | ||||| ||||| || || || | ||| Sbjct 21413 AATAATGACTTATTTCTGTTCGAGTTACGACGTGTTAGAAAAATAGCCGATGACGAAGGC 21354 Query 1625 GTAGATGAACCTATCTATATCTTAGCGGGTACATCGTCAACGTCTATACAGAACAACGTG 1684 ||| | || || || || || ||||| ||| || || | || || || ||| | Sbjct 21353 GTAAAAGAGCCGATGTACATATTAGCTGGTGTTTCCAGTTCGACGATTCAAAAGAACATA 21294 Query 1685 CTGCAAGAACTTTATAATAAATACGGATTTGAGCCCAAGTATGATAAGCATGGGTCTTTC 1744 ||||||| || ||||||| ||| | || || |||||||| || || || ||| Sbjct 21293 TTGCAAGAGCTATATAATATGTACAACATCGAACCTAAGTATGACAAACACGGAAATTTT 21234 Query 1745 GTGTTTTGTGGTGTAAAAGTCGTGCAGGTTTACACTGGATCAATTAGTGGTCTTAAACGT 1804 ||| | ||| || || || || || | || || ||| ||| | || || | | Sbjct 21233 AAGTTGTTTGGCGTGAAGGTGGTACAAGCCTATACGGGAAATATTGGAGGCGTTGGAGCT 21174 Query 1805 GCCCGTGGTTTCACAGCGTTCGGCGCTTATGTTAATGAGGCATCACTTGCTAA-CGAG-G 1862 | ||| | ||||| ||||| |||||||| || || || || || || || |||| Sbjct 21173 ATTAGAGGTATGACAGCTTTCGGTGCTTATGTAAACGAAGCGTCGCTAGCCAAGCGAGAA 21114 Query 1863 TTGTTTTCAAGGAGATTATATCACGGTGCTCTGGCGAAGGTGCTCGTGTGGTTTGGGATA 1922 ||||| || || ||| |||| || || ||||| ||||| | | | | |||| Sbjct 21113 GTGTTTGCA--GAAATTGTATCGCGTTGTTCTGGAACTGGTGCAAGGATATTAGGCGATA 21056 Query 1923 GCAACCCAGATAATCCTAATCACTGGCTTAACCGAGACTACATTGGCAA---GAATGACG 1979 ||||||||||| || | || ||| | || || ||||||| || || | | Sbjct 21055 CAAACCCAGATAACCCAGAACATTGGTTAAAAAAGGAATACATTGATAATCCGAGTAA-- 20998 Query 1980 GAAAGATTATA-GATTTCAGCTTCAAGCTAGACGATAACACTTTCTTATCAAAACGCTAT 2038 ||| |||| | ||||| || || |||| |||||||| || || | |||| ||| Sbjct 20997 -AAATATTAAATCGTTTCATTTTGAA-TTAGATGATAACACATTTTTGGCTGAACGTTAT 20940 Query 2039 ATAGACTCTATCAAAGCAGCTACGCCCAAG-GGCAAATTCTACGATAGAGATAT 2091 ||| || |||| |||||| |||||| || | || |||||| | || || Sbjct 20939 CGAGAAAACATAAAAGAAGCTAC-CCCAAGCGGGATGTTTTACGATCGGGACAT 20887 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 110652830425364