Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq210017 134 1e-26 >seq210017 Length=1697 Score = 134 bits (148), Expect = 1e-26 Identities = 817/1296 (63%), Gaps = 32/1296 (2%) Strand=Plus/Plus Query 147114 ACGGTGAATTGAATCGTGTTTGCTGCGGGTTTGGTTCTCAAATAGTACATGCCCGTTTTT 147173 || ||||| ||||| | ||||| || ||||| ||||| ||||| ||||| || |||||| Sbjct 46 ACTGTGAACTGAATAGCATTTGCAGCAGGTTTTGTTCTTAAATAATACATTCCAGTTTTT 105 Query 147174 AAACCCTTTTCCCAAGAATAGTCGTGAATGGATGATAAAACTTTA---TAGGTTGGATTG 147230 | || || ||||| ||| ||||| || | || |||| ||| | || | Sbjct 106 AGTCCAGCTTTCCAAGCATAAAAATGAATTGAAGTCAA---TTTACCATAGTTCGGTTCA 162 Query 147231 GCCACAAAAAGATTGAGCGATTGGCTCTGATCGATGTAAGGTCCCCGCTCTGCGGCCATG 147290 |||||| || ||| | ||||| || ||||| || ||| ||| || || || || Sbjct 163 GCCACATGAATATTAAATGATTGACTTTGATCAATAAAAGCTCCACGATCACAAGC-ATA 221 Query 147291 TCCAACACTACTTTTTGTTTA-ATTTCCCAAGCGGTCTTGAAGAGCGCCTTGATATTGTG 147349 | | |||| | | |||||||| | ||||| | | | | ||||| || Sbjct 222 ATCTATTGTACTCCTAACAGATATTTCCCATACCGTCTTATACAAATCTCTTATATTTTG 281 Query 147350 TGGAATTTCATCAATATTTTGTACAGATCCGTTGTTTTTAATAATT---TTTATCATGAT 147406 ||||| | ||||||||||| | ||| || ||| ||| ||| ||| |||| Sbjct 282 AGGAATCTTTTCAATATTTTGAATAGACCCACGATTTGAAATGATTAAGTTTTTCATATC 341 Query 147407 ATCTGTCGAATATACGTTGGTGTCTACGAGTTTATCGACGAGATGCTGATTGACCACTTG 147466 ||| || | | | | | | | || || || | || | ||| ||||| || | ||| Sbjct 342 ATCA-TCCCACAAATCTAGTTCTGTAAGATCTTTTA-ACAA-ATGATGATTAACAATTTG 398 Query 147467 ATACTCGCCCGACAGAACTCTTCGTACGTACAAATTACTAGTAAACGGCTCGAACGACTC 147526 | || || || | ||| | || || | ||| || | || || || || || Sbjct 399 GAATTCACCAGATAAAACCCGGCGATTATATATATTTGATGTGTATGGTTCAAATGATTC 458 Query 147527 GTTGTTACCTAGAATCTGTGCAGTCGTTGCCGTCGGCATGTAAGCAATCAATAATGAATT 147586 |||||||| | ||| ||||| || | ||| || ||||| ||||| ||||| ||||| Sbjct 459 ATTGTTACCCAAAATTTGTGCGGTTGATGCTGTTGGCATTGGTGCAATTAATAACGAATT 518 Query 147587 GCGTAAGCCGTGCATAGCCATTTCTCGCTTAAGCTCGTCCCAGTTCCAAAGATCATTCGA 147646 || | || || ||| |||| ||| | || ||| | ||| | || | | Sbjct 519 TCGAACACCATGTTGAGCAATTTTATCCTTTAATTCAGACCAATCCCATAAAT---TTGT 575 Query 147647 TTGGTTAATATTCCACAAATCAAACTGTAAAAGTCCACAACTTGCAGGGCTTCCATCGTA 147706 | || | ||||||||| ||| | ||||||| || |||| ||||| || || || Sbjct 576 TGGGATTTTATTCCACATGTCATATTGTAAAATACCCTTACTTACAGGGGAGCCTTCATA 635 Query 147707 AGAATCGTATGTTCCGTGCAGTTTAGCTAGTTCGATACT---TTGACTTAGTGCACCATA 147763 | || || | || || ||||| ||| ||| || || || || ||||| Sbjct 636 TGTTTCATAAGGACCCAATTCTTGAGCTAATTCACAACTAGCTT--CTAAG-GCGCCATA 692 Query 147764 ATAAATAGTTTCTGAAATCTTTTTATTTAAATCTCTAGCCTCTTGGCTGTCGTAGGGCAT 147823 ||||||||||| |||| | || || || | |||| |||| ||| || || || | Sbjct 693 GTAAATAGTTTCAAAAATTTGTTGGTTCAATAATTTAGCTTCTTTGCTTTCATAAGGAAA 752 Query 147824 ATCCAAAATGGCGAACGTATCCGCAAGTCCTTGAATACCGATACCGATGGGTCGGTGTCT 147883 | || | || | ||| |||||||| || | || || || || |||| || | Sbjct 753 ACGCATTAGTATAAAAGCATCAGCAAGTCCCTGTACCCCAATTCCAATTGGTCTATGCCG 812 Query 147884 GAAATTCGATGCTTGAGCGCTAGCCAACGGATAAAAATTCAAGTCGATAATTTTATTGAG 147943 ||||| ||| || ||| | | |||||| |||| | || ||||||||||| | Sbjct 813 TAAATTTGATTTTTTAGCTTCGGGGACAGGATAATAATTTACATCTATAATTTTATTTAA 872 Query 147944 ATTATTGGTAACCACTCTAGATACATTGTAGAGCGACTTAAAGTCGAAGCTTTTAAACTG 148003 ||| || || | | | | || |||| | | || ||||| ||| ||||| ||| Sbjct 873 ATTTTTCGTTATAATTTTTGAAACATGTTTTAATTTATTGAAGTCAAAGGTTTTATCCTG 932 Query 148004 TTTATTGGCAAAATTATTTACGGCAATCGAGGCCAAGTTACACACGGCCGTTTC-TCGAT 148062 | | || |||| | || || || ||||| ||||| || || |||| || Sbjct 933 ---AGAAACGAACATATTAAGAGCTATAGACGCCAAATTACATACAGCAATTTCATC--- 986 Query 148063 TGTCG--CTATATTGAACGATTTCGGCACACAGATTGCTGTTTCGAATCACTCCCTCGtt 148120 || || ||| | || ||||| | || | ||| ||| ||||| |||| | || Sbjct 987 TGGCGAAGAATACTCCACAATTTCAGTGCATAAATTACTGCAACGAATTGTTCCCACATT 1046 Query 148121 tttttGATTATTTTTATTGTTAACGTGATCTTTAAACATCATGTATGGAGCTCCGGTCTC 148180 || ||||| |||| | ||| |||||| | | |||||| || | ||| ||||| Sbjct 1047 TTGCTGATTGCTTTTTCTATTACAAGCATCTTTGTATAGCATGTAAGGTGTTCCTGTCTC 1106 Query 148181 GACTTGAGTCTCAATAATTTTTCTATGAAGATCTAAAGCCGAAATTTGTTTTTTAAACTT 148240 || || | |||||||||| ||| | ||| |||| ||| ||| | Sbjct 1107 AACCTGTGACTCAATAATTGCAAACCAAAGTGTTTGTGCCTTTATTTTTTTATTAGCTCT 1166 Query 148241 GCCTTCGGCCTCGTAATTTTCGTAAAGGTCCTCGAATTCTTGGCCATAGCAATCGTTTAA 148300 || || || || || || | || |||||||| | || | ||||| ||| Sbjct 1167 ACCCTCTTTTTCATATTTAGTATATAATTCTTCGAATTCCTCACCCCATACATCGTGTAA 1226 Query 148301 ACCGGGACACTCGTCGGGGCACATCAATGACCATTTCCCTCCTGTCTTTACCCTCTTCAT 148360 ||| || |||| | |||||||| || ||||||| | | | | || || ||||| Sbjct 1227 ACCTGGGCACTTATGTGGGCACATTAAAGACCATTCATCGTCGGATTCAACTCTTTTCAT 1286 Query 148361 AAACAGATCAGGTGTCCACATGGCAAAAAGAAGATC 148396 ||||| ||| ||| |||||| ||| ||| ||||| Sbjct 1287 AAACAAATCTGGTATCCACAAAGCATAAAACAGATC 1322 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 477398031220240