Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq105373 163 2e-35 >seq105373 Length=2707 Score = 163 bits (180), Expect = 2e-35 Identities = 458/694 (66%), Gaps = 22/694 (3%) Strand=Plus/Plus Query 132200 TGTTGATTTACTATTTGATATTCACCCGATAAGACTCTTCGTACGTACAAATTACTAGTA 132259 || ||||| |||| |||| ||||||| || | |||| || ||| | ||| |||| Sbjct 63 TGATGATTAACTACTTGAAATTCACCAGAAAGAACTCGTCTATTGTATATATTTGAAGTA 122 Query 132260 AACGGCTCGAACGATTCGTTGTTTCCCAATATTTGAGCTGTCGTTGCCGTCGGCATGTAG 132319 ||||||| || |||||||| || || || ||||| || || | ||| || ||||| | Sbjct 123 TACGGCTCAAAAGATTCGTTATTACCTAAAATTTGTGCAGTAGATGCGGTTGGCATAGGG 182 Query 132320 GCAATCAATAATGAATTGCGCAGCCCGTGTATGGCCA-TTTGCCGTTTAAGCTCGTCCCA 132378 |||||||||| |||||| || | || ||| | || | ||| | |||||| || ||| Sbjct 183 GCAATCAATAGTGAATTCCGGACGCCATGTTTAGCGATTTTTTCTTTTAAG-TCAGACCA 241 Query 132379 GTTCCACAGATCATTCGATTGAGAGATATTCCACAAATCAAACTGTAAATGACCGCTACT 132438 | ||||| || || | | ||||||||| |||| |||| ||| ||| |||| Sbjct 242 ATCCCACAAGTC---CGTGGGTGTTTTATTCCACATATCATACTGCAAAATACCTTTACT 298 Query 132439 TGCAGGAGATCCGTTATAAGAATCGTATGCTCCGTGTAATTTGGCAAGTTCTATGCTCTG 132498 | |||| || |||||||| | || |||| || | | || || | || ||| Sbjct 299 TACAGGCGAACCGTTATAGGTTTCATATGAACCATATTTTTCCGCTA--ACTCACAACTG 356 Query 132499 ACT--CAGGGCACCATAATAAATAGTCTCTGAGATTTTTCTATTCAATTCCCTTGCTTGT 132556 || || ||||| || ||||| || || | || | | ||||||| || |||| | Sbjct 357 GCTTCCAAAGCACCGTAGTAAATTGTTTCAAAAATCTGTTGATTCAATAATCTAGCTTCT 416 Query 132557 TGACTGTCGTAGGGCAAATTTAAAATAGCGAACGCATCGGCAAGTCCCTGAATGCCGATA 132616 | ||| || || || || || | || || || || | ||| |||| || || Sbjct 417 TTACTTTCATAAGGATAACGCAATAGGATAAAAGCGTCCGCCAATCCTTGAACTCCAATT 476 Query 132617 CCGATGGGTCTATGTTTAAAATTCGATACTTGTGCGCTAGTCAGCGGATAAAAGTTTTTG 132676 || || |||| ||| ||||||| ||| || || | || || ||| ||||| Sbjct 477 CCAATTGGTCGATGCCTAAAATTAGATTTTTTAGCCTCTGGAAGTGGGTAATAGTTTACA 536 Query 132677 TCTATTATTTTATTGAGATTGTTAGTGACAACTCTAGCCACTTTATATAGCGATTC---A 132733 ||||| |||||||| | ||| | || | || | | | || || | | |||| | Sbjct 537 TCTATAATTTTATTCAAATTTCTTGTTATAATTTTGGAAAC---ATTTTTCAATTCAATA 593 Query 132734 AAGTCAAAGTTTTTAGTCCTTTTGTTGGCA-AAACA-ATTGACGGCAATCGAGGCCAAAT 132791 || ||||| || ||| |||| | || ||||| ||| | ||||| || ||||||| Sbjct 594 AAATCAAACTT-----TCCATTTGGTAACACAAACATATTTAGAGCAATAGATGCCAAAT 648 Query 132792 TGCATACGGCTGTCTCTTTATTATCGCTATACTGTACGATTTCTGCACACAAATTACTGT 132851 |||| ||||| | || | | ||| | || ||||||| ||||||||| ||| Sbjct 649 TGCAAACGGCAATTTCATCTGAACAAGAATATTCCACAATTTCTGTACACAAATTGCTGC 708 Query 132852 TTCGAATAACTCCCAAGtttttttGATTGTTTTT 132885 ||||| ||| | ||||||||||| |||| Sbjct 709 AACGAATTGTTCCAAGATTTTTTTGATTACTTTT 742 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428828731674135