Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq210017 127 2e-24 >seq210017 Length=1697 Score = 127 bits (140), Expect = 2e-24 Identities = 483/749 (64%), Gaps = 27/749 (4%) Strand=Plus/Plus Query 145055 TGATTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAG 145114 ||||| || | || || || || | || || || || ||| | || || ||| | Sbjct 385 TGATTAACAATTTGGAATTCACCAGATAAAACCCGGCGATTATATATATTTGATGTGTAT 444 Query 145115 GGTTCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCC 145174 |||||||| || || || || |||| ||||| ||||| | ||| || ||||| || Sbjct 445 GGTTCAAATGATTCATTGTTACCCAAAATTTGTGCGGTTGATGCTGTTGGCATTGGTGCA 504 Query 145175 ACCAATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCC 145234 | ||||| ||||| || | || || | || | ||||||| | ||||||| Sbjct 505 ATTAATAACGAATTTCGAACACCATGTTGAGCAATTTTATCCTTTAATTCAGACCAATCC 564 Query 145235 CATAGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTCGCTGGCGGGG 145294 |||| || || | | ||||||||| || || ||||| |||| || | ||| Sbjct 565 CATAAATTTGTTGGGATTTTATTCCACATGTCATATTGTAAAATACCCTTACTTACAGGG 624 Query 145295 CTGCCTTGAAAGGAACTGTAACTGCCCCAAGTTTTG-GCGAGCTCGCAACTCGCCTCCAG 145353 ||||| | | | ||| | ||||| | ||| || | || ||||| || || | Sbjct 625 GAGCCTTCATATGTTTCATAAG-GACCCAATTCTTGAGCTAATTCACAACTAGCTTCTAA 683 Query 145354 AGCGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATCGCTCTC 145413 ||||| | ||||| || || |||||| ||| | | | ||||| | ||| || Sbjct 684 GGCGCCATAGTAAATAGTTTCAAAAATTTGTTGGTTCAATAATTTAGCTTCTTTGCTTTC 743 Query 145414 GTACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCGATGGG 145473 || || | |||| |||| ||||||||| || || ||||||| || | || || || Sbjct 744 ATAAGGAAAACGCATTAGTATAAAAGCATCAGCAAGTCCCTGTACCCCAATTCCAATTGG 803 Query 145474 CCGATG-------TTTCATGTTGCTCATCCTCGCCGACTCGATAGGATATCGATTACGGT 145526 | ||| ||| || || | | | ||| ||| |||| | || |||| | Sbjct 804 TCTATGCCGTAAATTTGATTTT--TTAGCTTCGGGGACAGGATAATA-AT---TTACA-T 856 Query 145527 CGATAATTTTATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACTTTTCAAAGT 145586 | ||||||||||| || ||| | || | |||| || || || || | |||| Sbjct 857 CTATAATTTTATTTAAATTTTTCGTTATAATTTTTGAAACATGTTTTAATTTATTGAAGT 916 Query 145587 CAAACCG---AGCCTCGTCAACGACCACACAGCTATTGACGGCGATCGACGCCAAATTAC 145643 |||| | ||| ||||| || |||| | || || ||||||||||||| Sbjct 917 CAAAGGTTTTATCCTGAGAAACGAACA------TATTAAGAGCTATAGACGCCAAATTAC 970 Query 145644 AAACTGCCGTCTCCTC-GGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTACAT 145702 | || || | || || |||| | || | || || || | ||| ||||| || || Sbjct 971 ATACAGCAATTTCATCTGGCGAAGAA-TACTCCACAATTTCAGTGCATAAATTACTGCAA 1029 Query 145703 TTGATGGTTCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATG 145762 || ||||||| |||||||||||| ||||| || || || || || ||||| |||||| Sbjct 1030 CGAATTGTTCCCACATTTTGCTGATTGCTTTTTCTATTACAAGCATCTTTGTATAGCATG 1089 Query 145763 TACGGTCCGCCAGTCTCCACCTGCGTCTC 145791 || ||| || ||||| ||||| | ||| Sbjct 1090 TAAGGTGTTCCTGTCTCAACCTGTGACTC 1118 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 470765995889280