Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq210017 426 2e-114 seq139863 376 3e-99 seq105373 343 2e-89 seq1919 95.1 2e-14 >seq210017 Length=1697 Score = 426 bits (472), Expect = 2e-114 Identities = 975/1455 (67%), Gaps = 32/1455 (2%) Strand=Plus/Plus Query 61841 TTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCC 61900 || || | |||||| ||||| | | | || ||||| || | || ||| |||||||| Sbjct 40 TTATCTACTGTGAACTGAATAGCATTTGCAGCAGGTTTTGTTCTTAAATAATACATTCCA 99 Query 61901 GTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGA 61960 |||||||| || |||| | |||||||| || || | ||| ||| |||| Sbjct 100 GTTTTTAGTCCAGCTTTCCAAGCATAAAAATGAATTGAAGTCAATTTACCATAGTTCGGT 159 Query 61961 TCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCC 62020 || || | ||| ||||| | |||||||||||||| || || ||||| | || ||| Sbjct 160 TCAGCCACATGAATATTAAATGATTGACTTTGATCAATAAAAGCTCCACGATCACAAGCA 219 Query 62021 ATTTTTATAATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATC 62079 | ||| | || | | |||||||| | || ||||| || || |||| ||| Sbjct 220 TAATCTATTGTACTCCTAACAGATATTTCCCATACCGTCTTATACAAATCTCTTA-TATT 278 Query 62080 TTCTGGAAGGTTTG---TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGAT 62136 || |||| ||| |||| ||||| || |||| || || || || || || || Sbjct 279 TTGAGGAATCTTTTCAATATTTTGAATAGACCCACGATTTGAAATGATTAAGTTTTTCAT 338 Query 62137 CTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTG 62196 ||||||| ||| || | | || || | | || | | | ||| ||||||| | ||| Sbjct 339 ATCATCATCCCACAAATCTAGTTCTGTAAGATCTTTTAACAAATGATGATTAACAATTTG 398 Query 62197 AAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTC 62256 ||||| ||||| || || | ||| | || ||||| || || ||||| | || || Sbjct 399 GAATTCACCAGATAAAACCCGGCGATTATATATATTTGATGTGTATGGTTCAAATGATTC 458 Query 62257 ATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATT 62316 ||| || ||||||||||| || |||||||| || ||||| ||||| | ||||| ||| Sbjct 459 ATTGTTACCCAAAATTTGTGCGGTTGATGCTGTTGGCATTGGTGCAATTAATAACGAATT 518 Query 62317 TCTAAGACCGTATGTTCTG--ATTTTATCTTTTAGAGGTTC---CCAATTCCAAAGATCC 62371 || || ||| ||||| | |||||||| |||| ||| ||||| ||| | || Sbjct 519 TCGAACACC--ATGTTGAGCAATTTTATCCTTTAA---TTCAGACCAATCCCATAAATTT 573 Query 62372 GACGGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACA 62431 | || | ||||| |||||| ||||| | || ||| || Sbjct 574 GTTGGGATTTTATTCCACATGTCATATTGTAAAATACCCTTACTTACAGGGGAGCCTTCA 633 Query 62432 TATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAA 62491 ||||| || || || || | | ||||| ||||||||| || ||||| || || || Sbjct 634 TATGTTTCATAAGGACCCAATTCTTGAGCTAATTCACAACTAGCTTCTAAGGCGCCATAG 693 Query 62492 TAAATGGTTTCGAAGATCTTCTTATTTAGATC-TTGCGCTTCCAGGCTATCAAATGGATA 62550 ||||| ||||| || || || || || || || ||||| ||| ||| | ||| | Sbjct 694 TAAATAGTTTCAAAAAT-TTGTTGGTTCAATAATTTAGCTTCTTTGCTTTCATAAGGAAA 752 Query 62551 ATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCT 62610 | | || ||||| || || || | ||| || || ||||| || || |||||||| | Sbjct 753 ACGCATTAGTATAAAAGCATCAGCAAGTCCCTGTACCCCAATTCCAATTGGTCTATGCCG 812 Query 62611 CTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAG 62670 ||| || ||| |||||| || | |||||||||||| | ||||||||||||||| | Sbjct 813 TAAATTTGATTTTTTAGCTTCGGGGACAGGATAATAATTTACATCTATAATTTTATTTAA 872 Query 62671 ATTTCTG---ACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGCCCATC 62727 |||| | | |||| ||||| |||| || | ||| || ||||| ||| Sbjct 873 ATTTTTCGTTATAATT--TTTGAA-ACATGTTTTAATTTATTGAAGTCAAAGGTTTTATC 929 Query 62728 TATT---ACAAACATGTTCAATGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGC 62784 || ||||| || | || | ||| |||| |||||| || || | |||| | Sbjct 930 CTGAGAAACGAACATATTAAGAGCTATAGACGCCAAATTACATACAGCAATTTCATCTGG 989 Query 62785 ATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTG 62844 | ||| | | || |||||||| | |||||| || || ||||| | |||||| Sbjct 990 CGAAGAATACTCCACAATTTCAGTGCATAAATTACTGCAACGAATTGTTCCCACATTTTG 1049 Query 62845 TTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAAT 62904 ||||| || ||| | ||||| ||||| || || || ||| | || || || || |||| Sbjct 1050 CTGATTGCTTTTTCTATTACAAGCATCTTTGTATAGCATGTAAGGTGTTCCTGTCTCAAC 1109 Query 62905 CTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCTCTT 62964 ||| || || ||||| || ||| | | | ||||||||| | || || |||| Sbjct 1110 CTGTGACTCAATAATTGCAAACCAAAGTGTTTGTGCCTTTATTTTT--TTATTAGCTCTA 1167 Query 62965 TTCTCTTTCGTATAGT--GTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAGT 63022 |||||| ||| | ||||| ||| |||||| || || ||||| |||| || | Sbjct 1168 CCCTCTTTTTCATATTTAGTATATAATTCTTCGAATTCCTCACCCCATACATCGTGTAAA 1227 Query 63023 CCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATA 63082 || || || | || || ||||| || ||||| || |||| | |||| ||||||| Sbjct 1228 CCTGGGCACTTATGTGGGCACATTAAAGACCATTCATCGTCGGATTCAACTCTTTTCATA 1287 Query 63083 AAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCT 63142 || | ||| || ||||| | ||| ||| |||||||||| || |||||| ||||| Sbjct 1288 AACAAATCTGGTATCCACAAAGCATAAAACAGATCTCTGGCTCGTGTTTCCTCTTTTCCA 1347 Query 63143 GTATTCTT-TTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATAT 63201 |||||||| |||||| || | || | | |||||||||||||| ||||| | ||||| Sbjct 1348 GTATTCTTCTTTAAG-TCTAAAAATTCAAGTATATCAGAATGCCATGGTTCTAGATATAT 1406 Query 63202 GGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATA 63261 || | | |||| |||| ||| ||||| || || || | ||||| ||| ||||| | Sbjct 1407 TGCAAAAGCTCCTGGCCTTTTATTTCCACCTTGGTCAACGTATCGAGCAACATTATTGAA 1466 Query 63262 AACTCTCAACATTGG 63276 |||||||||||| || Sbjct 1467 AACTCTCAACATAGG 1481 >seq139863 Length=2592 Score = 376 bits (416), Expect = 3e-99 Identities = 532/743 (72%), Gaps = 5/743 (1%) Strand=Plus/Plus Query 32453 AACATTATAAAtttttttAAATCCCAATTCAGAAATCAATCTATCTGCGACAAATTCTAT 32512 |||||| || ||| | || ||||||||| | |||| || || |||||||| || Sbjct 1279 AACATTTTAC--TTTATCAACTCCCAATTCTCTCAATAATCGGTCAGCAACAAATTCAAT 1336 Query 32513 ATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAG 32572 |||| ||| | | |||||||| || || | || || || | || |||| | Sbjct 1337 ATATTGCGACATTAAATTGCAATTCATACCAATTAAATTTACAGGTAATGCGTCAGTTAA 1396 Query 32573 AAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATAGATCTTACTGTTTCTTCACTCGG 32632 ||||||||||||||| || || || | |||||| | | | |||||| ||| || Sbjct 1397 AAATTCTTGTTCAATTTTCACTGCTTCAGATATAATTTCAATAATTCTTTCTTTACTTGG 1456 Query 32633 TGGATACAATAAATGTTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCT 32692 | | | ||||||||||||||| |||||||| ||||| || |||| || || ||||| Sbjct 1457 TTTTTGTATTAAATGTTTAAACATTAAACATGCAAAATCACAATGTAATCCTTCATCTCT 1516 Query 32693 ACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAA 32752 ||||| ||| || ||||| || | ||| ||||| |||||||| ||||| | |||||| Sbjct 1517 TGAAATTAGTTCATTTGAAAATGTTAATCCTGGCATAAGGCCACGTTTTTTTAACCAAAA 1576 Query 32753 TATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCT 32812 ||| || ||||| ||| |||||| |||||||| ||||| ||||| ||||||| | Sbjct 1577 TATTGATGCAAAACTACCACTAAAGAATATTCCTTCAACTGCTGCAAAAGCAATAATACG 1636 Query 32813 CTCTCCATAACCGGC-GCTGT-CATGT-ATCCACTTTTGAGCCCAATCGGCCTTCTTTTT 32869 ||||||||| || | | | | ||| ||||| | | |||||||| || || ||||| Sbjct 1637 TTCTCCATAATTAGCTGATTTACTTGTTATCCAATCTAATGCCCAATCAGCTTTTTTTTT 1696 Query 32870 TACACAAGGCATTGTCTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAAC 32929 ||||| || | ||| || || |||||||| || | | | |||| || ||| || | Sbjct 1697 AACACATGGTAATGTTTCAATTGCATTAAAAAGGAAATCTCTTTCTTTTGGATCCTTTAT 1756 Query 32930 ATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAA 32989 |||||||||||| |||| || |||||||| ||||||| ||||| || || |||||||| Sbjct 1757 ATATGTATCAATTAAAATGCTGTACATTTCGGAATGAACATTTTCCATAGCTATTTGAAA 1816 Query 32990 TCCGTAGAAGCATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATT 33049 ||| || || || | || || || | || |||||| || ||| ||||| | | ||| Sbjct 1817 TCCATAAAAACAACGCGCTTCAGTTACTTGAACTTCTTGACTAAAACGTTCAACAAGATT 1876 Query 33050 TTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTT 33109 ||| || ||||| || || || |||||||| || || |||||| ||| |||| Sbjct 1877 TTCGTTAACTATACCATCTGAAGCAGCAAAAAATGCTAAAACATGTGATATGAAATGACG 1936 Query 33110 TTCGTCTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCAC 33169 ||| | | |||| ||| ||||| || | ||||| || |||| ||| ||||| || || Sbjct 1937 TTCTCCAGAAGTTAATTTGTTCCAGTCCGTCATATCCTTTGATAAATCAACTTCCTCAAC 1996 Query 33170 TGTCCAAAATGATGCCTCTGCCT 33192 |||||||| ||||| || |||| Sbjct 1997 CGTCCAAAAAGATGCTTCAGCCT 2019 >seq105373 Length=2707 Score = 343 bits (380), Expect = 2e-89 Identities = 711/1053 (68%), Gaps = 19/1053 (2%) Strand=Plus/Plus Query 62163 TTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAG 62222 ||||| || ||| | || ||||||||||||||||||| ||||| | |||| | | Sbjct 46 TTAAATCTTTAATTAAGTGATGATTAACTACTTGAAATTCACCAGAAAGAACTCGTCTAT 105 Query 62223 TGTAAATATTACTGGTATACGGTTCCACAGACTCATTATTTCCCAAAATTTGAGCAGTTG 62282 |||| ||||| |||||||| || | ||| || ||||| || |||||||| ||||| | Sbjct 106 TGTATATATTTGAAGTATACGGCTCAAAAGATTCGTTATTACCTAAAATTTGTGCAGTAG 165 Query 62283 ATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTGATTTTAT 62342 |||| || |||||||| || | ||||| ||| | | || | | | |||||| | Sbjct 166 ATGCGGTTGGCATAGGGGCAATCAATAGTGAATTCCGGACGCCATGTTTAGCGATTTTTT 225 Query 62343 CTTTTAGAGGTTC---CCAATTCCAAAGATCCGACGGTACAACNNNNNNNNNNNNNNNTT 62399 |||||| || || ||||| ||| | |||| ||| | Sbjct 226 CTTTTA-AG--TCAGACCAATCCCACAAGTCCGTGGGTGTTTTATTCCACATATCATACT 282 Query 62400 GTAGAATACCGTTACTGGCGTACGATCCTACATATGTATCGTATGGTCCTTCCTTCTCAG 62459 | | |||||| ||||| | ||| || ||| || || |||| || | || || | Sbjct 283 GCAAAATACCTTTACTTACAGGCGAACCGTTATAGGTTTCATATGAACCATATTTTTCCG 342 Query 62460 CTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTA 62519 ||| |||||||| || || || |||||||| ||||| ||||| || |||| | ||| | Sbjct 343 CTAACTCACAACTGGCTTCCAAAGCACCGTAGTAAATTGTTTCAAAAATCTGTTGATTCA 402 Query 62520 G--ATCTTGCGCTTCCAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAA 62577 |||| || ||| || ||| | |||||| || || ||||| ||||| || || Sbjct 403 ATAATCTAGC--TTCTTTACTTTCATAAGGATAACGCAATAGGATAAAAGCGTCCGCCAA 460 Query 62578 TCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAAT 62637 ||||||||| ||||| || || |||| ||| || |||||| ||| ||| ||||||| Sbjct 461 TCCTTGAACTCCAATTCCAATTGGTCGATGCCTAAAATTAGATTTTTTAGCCTCTGGAAG 520 Query 62638 AGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACAATTACTTTGACCACATC 62697 || ||||| || | ||||||||||||||| | |||||| || | |||| |||| Sbjct 521 TGGGTAATAGTTTACATCTATAATTTTATTCAAATTTCTTGTTATAATTTTGGAAACATT 580 Query 62698 CTTCAGTTTGAGAAAATCAAATCGCCCAT---CTATTACAAACATGTTCAATGCAACAGA 62754 |||| || | ||||||||| |||| || |||||||| || | |||| ||| Sbjct 581 TTTCAATTCAATAAAATCAAACTTTCCATTTGGTAACACAAACATATTTAGAGCAATAGA 640 Query 62755 TGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAG 62814 ||||| ||| |||||||| | |||| | | | ||||| | || || || || | Sbjct 641 TGCCAAATTGCAAACGGCAATTTCATCTGAACAAGAATATTCCACAATTTCTGTACACAA 700 Query 62815 ATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTT 62874 ||| || || || ||||| | ||||| ||||||||| || ||| || | || || Sbjct 701 ATTGCTGCAACGAATTGTTCCAAGATTTTTTTGATTACTTTTACGGTTGCAAGTGTCTTT 760 Query 62875 ATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGAC 62934 || | || ||||| |||||||||||| |||| ||| | || ||| | | Sbjct 761 GTACATTATATATGGATTACCAGTTTCAACTTGAGCTTCAACTATACTAAACCACAACGC 820 Query 62935 TCGAGCCTTTATTATAGATTTGTATCTCT--TTTCTCTTTCGTATAGTGTATACAATCGT 62992 ||||||||| | ||| || ||| | || ||| |||| ||| | |||| | Sbjct 821 TCGAGCCTTAACTAT--TTTAGTAGCCCTACCTTCGTTTTCATATTTTTCGTACAGATTT 878 Query 62993 TCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGACACATCAACGAC 63052 | ||| || || ||||| |||| | || || ||||| | | |||||||| || ||| Sbjct 879 TTGAATTCATCACCCCAGACATCGAACAAACCCGGACACTTGTGTGGACACATTAAAGAC 938 Query 63053 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AA 63111 || || || | || | | |||| |||||| | ||| |||||||| | | | ||| || Sbjct 939 CAATCACCATTATTTTCTAAGCGTTCCATAAATAAATCTGGAATCCATA-ACCCATAGAA 997 Query 63112 TAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 63171 |||||||| | | | ||| || ||||| ||||| ||||| | ||| | || | | Sbjct 998 GAGATCTCTTGCACGAATTTCTTCTTTTCCGGTATTTTTTTTCAAATCTAAAAATTCAAA 1057 Query 63172 AATATCAGAATGCCACGGTTCCAAGTATATGGC 63204 ||||| | |||||||||||| || || || || Sbjct 1058 TATATCTGCATGCCACGGTTCTAAATAAATTGC 1090 >seq1919 Length=1291 Score = 95.1 bits (104), Expect = 2e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 63515 GAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCG 63574 || || | ||| || || |||||||| || || || | ||| || || || || Sbjct 1 GAGAGCAAATTATATGTTTCAATAGCACTCTCAATGTCATCTCCATGTATGCCCACCGCT 60 Query 63575 ACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAG 63634 || | ||| | |||||| || ||||||||| | || || | |||| ||| || | || Sbjct 61 ACTCTCATAAGCATGTGTTGCGGTCTTTCAGCTATTTTCCTATTTACTTTTAAGAGATAT 120 Query 63635 GATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATA 63694 || ||||| ||||||||||||||||| |||||| ||| || || || || ||||| Sbjct 121 GAACGCTCCAATGTTTTAAAACCAAAATAATTGTATCCAAAATCCCGATCATATATAATT 180 Query 63695 ACCGAGTTGAGTTTATC 63711 | || || |||||||| Sbjct 181 GCAGAATTTAGTTTATC 197 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 631958284833200