Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq105373 183 3e-41 >seq105373 Length=2707 Score = 183 bits (202), Expect = 3e-41 Identities = 553/838 (66%), Gaps = 27/838 (3%) Strand=Plus/Plus Query 129064 ATTTTGTTTCGCATCTGTTCGTTGTACAAATTCAGTTTGATCAAATCGTCGGTCAAGTAT 129123 |||||||||| || | ||| | ||| ||| || || || ||||| | | |||| Sbjct 8 ATTTTGTTTC--ATATTTTCATCCCACAGATTAAGATTAATTAAATCTTTAATTAAGTGA 65 Query 129124 TTGTTTATTACTTGAAAGTCACCCGCCAAAACGCGCCGAACGTAAATGTTGTTGGTGAAC 129183 | || | ||||||||| ||||| | | ||| || | | ||| || || || || Sbjct 66 TGATTAACTACTTGAAATTCACCAGAAAGAACTCGTCTATTGTATATATTTGAAGTATAC 125 Query 129184 GGCTCAAACGATTCATTGTTGCCTAATATTTGAGCCGTTGTCGCGGTGGGCATGTAAGCC 129243 |||||||| ||||| || || ||||| ||||| || || | ||||| ||||| || Sbjct 126 GGCTCAAAAGATTCGTTATTACCTAAAATTTGTGCAGTAGATGCGGTTGGCATAGGGGCA 185 Query 129244 ACGCAAAGCGAGTTTCGCAAACCGTGCTGTTTA---ATGTCtttttttAATTGTGTCCAG 129300 | | || || || || | || || |||| || | || |||||| | | ||| Sbjct 186 ATCAATAGTGAATTCCGGACGCCATG---TTTAGCGATTTTTTCTTTTAAGTCAGACCAA 242 Query 129301 TCCCACATCGATGTGGGTGTGTGATTCCACAAGTCGTATTGCAATATACCCAAACTGGCG 129360 ||||||| |||||||| | |||||||| || || ||||| ||||| ||| | Sbjct 243 TCCCACAAGTCCGTGGGTGTTTTATTCCACATATCATACTGCAAAATACCTTTACTTACA 302 Query 129361 GGACTGGAAAAGT---AGGAATCGTGCACGCCGTAAGCTTTTGCCAATTCGCAACTCGCT 129417 || ||| || ||| || | || || || || || || ||||| ||| Sbjct 303 GGC---GAACCGTTATAGGTTTCATATGAACCATATTTTTCCGCTAACTCACAACTGGCT 359 Query 129418 TCCAATGCGCCAAAATAAATTGTTTCGGCAATTTTGGTG-TTCAACACTTTGGCCTGGTC 129476 ||||| || || | ||||||||||| ||| | | || ||||| | | | || | | Sbjct 360 TCCAAAGCACCGTAGTAAATTGTTTCAAAAATCT-GTTGATTCAATAATCTAGCTTCTTT 418 Query 129477 GCTTTCGTACGGCATACGCAACATGGCAAATGTGTCGGCCAAACCTTGAATACCCACACC 129536 ||||| || || |||||| | | ||| | ||| ||||| ||||||| || | || Sbjct 419 ACTTTCATAAGGATAACGCAATAGGATAAAAGCGTCCGCCAATCCTTGAACTCCAATTCC 478 Query 129537 GATGGGTCGATGTTTTCTATTGGATTTTTGTGCCGACAACAAG-GGATAGTAGTTGATGT 129595 || |||||||| | ||| ||||||| ||| | ||| || || ||||| | | Sbjct 479 AATTGGTCGATGCCTAAAATTAGATTTTTTAGCCT-CTGGAAGTGGGTAATAGTTTACAT 537 Query 129596 CTATAATTTTGTTTAAATT-CTTGACCACAATTTTCGTTACGTATTTTAA--CATTTCAA 129652 |||||||||| || ||||| |||| | |||||| | || | ||| || || | || Sbjct 538 CTATAATTTTATTCAAATTTCTTGTT-ATAATTTTGGAAACATTTTTCAATTCAAT--AA 594 Query 129653 AATTGTACTCGCCTACATCGATGTCGACAAATTGATTGACACAAATCGAGGCCAAATTGC 129712 ||| ||| || | | | | ||||| ||| | | ||| || |||||||||| Sbjct 595 AATCAAACTTTCCAT--TTGGTAAC-ACAAACATATTTAGAGCAATAGATGCCAAATTGC 651 Query 129713 AGACGGCACTTTCGTTTTTGTCACTGTACTCGACAATTTCGGCGCACAAATTACTATTTT 129772 | |||||| |||| | | | || || |||||||| | |||||||| || Sbjct 652 AAACGGCAATTTCATCTGAACAAGAATATTCCACAATTTCTGTACACAAATTGCTGCAAC 711 Query 129773 TAATGGTGCCCAAATGCTTTTGATTACTTTTCATGTTGCAAGCATCTTTGTACATCATGT 129832 ||| || || | || |||||||||||||| |||||||| ||||||||||| || | Sbjct 712 GAATTGTTCCAAGATTTTTTTGATTACTTTTACGGTTGCAAGTGTCTTTGTACATTATAT 771 Query 129833 ACGGCGTGCCCGTTTCGACTTGCGTTTCGACAATGGTCCTGAACAAGTCTCGAGCCTT 129890 | || | || ||||| ||||| | ||| || || | |||| |||||||||| Sbjct 772 ATGGATTACCAGTTTCAACTTGAGCTTCAACTATACTAAACCACAACGCTCGAGCCTT 829 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 418647021622105