Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_009904.1 Length=142072 Score E Sequences producing significant alignments: (Bits) Value seq107342 167 2e-36 >seq107342 Length=1567 Score = 167 bits (184), Expect = 2e-36 Identities = 233/327 (71%), Gaps = 0/327 (0%) Strand=Plus/Plus Query 131091 TTAAACCCTAACTGGTATTTATAGCCGATATAGGTTCCATGTACAGACTCGTCACGAATA 131150 || || ||||| ||| |||| ||||| ||||| |||||||| ||||| || ||||||||| Sbjct 1241 TTGAATCCTAATTGGAATTTGTAGCCAATATAAGTTCCATGAACAGATTCATCACGAATA 1300 Query 131151 ATTAATTTAATAATTTCGGCTGTATTAACCATTTTTGCCTCACCTAAATAGCGTAGTGGT 131210 || ||||| || ||||| || || | | ||| | ||||||||| || || Sbjct 1301 ATCAATTTGATGATTTCCGCAACGTTTGCTAGTTTATTATTGCCTAAATAGTAAAGAGGC 1360 Query 131211 GTGTAAAAACCTGAGTAAAATAGGAAGCTCTCCAACAGTACGGATGCACTCTTTTTCTGT 131270 || |||||||| ||||| |||||||| | || || | |||| ||| || || | | Sbjct 1361 GTATAAAAACCAGAGTAGAATAGGAATGTTTCTAAAAATACGCTAGCAACTTTCTTTTCT 1420 Query 131271 AGTGGTGTACCGTTTCTATAAATATCGTTAATAATATTAGCTTTATATTGTAAACGTTTA 131330 | ||||||||| || | ||||| || || || | | ||||| | ||||| | | Sbjct 1421 AATGGTGTACCAGTTTTGTAAATTTCATTGATTTTTTCTGCTTTTTTTTGTAGATAAACA 1480 Query 131331 TTTGTAGCTACCCATTCAAAGATATTGTCAATCTCTGTAGGTGTATTAAATGTGCTAAAA 131390 |||||| | |||||| ||||||| || || ||| | ||||| ||||| || || Sbjct 1481 TTTGTATTTGTCCATTCGAAGATATCATCGATTTCTTTTTTAGTATTTAATGTACTGAAG 1540 Query 131391 ATTGTTGAATAACTTTTAGCGTGTACT 131417 || | ||||||||||||||| || ||| Sbjct 1541 ATAGATGAATAACTTTTAGCATGAACT 1567 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 453301848954240