Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq148620 104 3e-17 seq13835 100 3e-16 seq91257 98.7 1e-15 seq18325 98.7 1e-15 seq158080 96.9 4e-15 seq180733 95.1 1e-14 seq189851 93.3 5e-14 >seq148620 Length=1050 Score = 104 bits (114), Expect = 3e-17 Identities = 91/111 (82%), Gaps = 2/111 (2%) Strand=Plus/Plus Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057 ||||| | |||| |||| | |||||||||| ||||||||||||||||||||| |||| Sbjct 801 AAAAAAATCCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 860 Query 57058 TCACCACTATACTACCGAGGATTGAATATATAAC-TTGAATATTGCAATTT 57107 | ||||||||||||||||||| | ||| || || || ||| || |||||| Sbjct 861 TGACCACTATACTACCGAGGACTTGATAAATTACATTCAAT-TTTCAATTT 910 >seq13835 Length=9045 Score = 100 bits (110), Expect = 3e-16 Identities = 70/80 (88%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 57002 ATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCAC 57061 |||| |||| |||| | |||||||||| ||||||||||||||||||||| ||||| || Sbjct 6958 ATTTCCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAAC 7017 Query 57062 CACTATACTACCGAGGATTG 57081 ||||||||||||||||| || Sbjct 7018 CACTATACTACCGAGGAATG 7037 >seq91257 Length=3616 Score = 98.7 bits (108), Expect = 1e-15 Identities = 80/96 (83%), Gaps = 2/96 (2%) Strand=Plus/Plus Query 56983 AAATTAACGTTTATGAAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGT 57042 ||||||| || | |||||| |||| |||| | |||||||||| |||||||||||| Sbjct 1677 AAATTAAAATTAAAAAAAAATC--CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGT 1734 Query 57043 GACAGGCGGACATACTCACCACTATACTACCGAGGA 57078 ||||||||| ||||| ||||||||||||||||||| Sbjct 1735 GACAGGCGGGGATACTGACCACTATACTACCGAGGA 1770 >seq18325 Length=2424 Score = 98.7 bits (108), Expect = 1e-15 Identities = 66/74 (89%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 57005 TTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 57064 |||||| |||| | |||||||||| ||||||||||||||||||||| ||||| ||||| Sbjct 173 TTCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCAC 114 Query 57065 TATACTACCGAGGA 57078 |||||||||||||| Sbjct 113 TATACTACCGAGGA 100 >seq158080 Length=2575 Score = 96.9 bits (106), Expect = 4e-15 Identities = 73/85 (86%), Gaps = 2/85 (2%) Strand=Plus/Minus Query 56994 TATGAAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGAC 57053 ||| |||||| |||| |||| | |||||||||| ||||||||||||||||||||| Sbjct 2191 TATAAAAAATC--CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGG 2134 Query 57054 ATACTCACCACTATACTACCGAGGA 57078 ||||| ||||||||||||||||||| Sbjct 2133 ATACTAACCACTATACTACCGAGGA 2109 >seq180733 Length=2293 Score = 95.1 bits (104), Expect = 1e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| |||| | |||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 1459 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACTA 1400 Query 57067 TACTACCGAGGA 57078 |||||||||||| Sbjct 1399 TACTACCGAGGA 1388 >seq189851 Length=2145 Score = 93.3 bits (102), Expect = 5e-14 Identities = 59/64 (92%), Gaps = 0/64 (0%) Strand=Plus/Minus Query 57020 AATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTACCGAGGAT 57079 |||||||||| ||||||||||||||||||||| ||||| ||||||||||||||||||| Sbjct 1533 AATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTATACTACCGAGGAC 1474 Query 57080 TGAA 57083 |||| Sbjct 1473 TGAA 1470 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 541777923759280