Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq105373 266 3e-66 seq210017 174 2e-38 seq25052 107 2e-18 >seq105373 Length=2707 Score = 266 bits (294), Expect = 3e-66 Identities = 685/1046 (65%), Gaps = 19/1046 (2%) Strand=Plus/Plus Query 153998 TAAATCTTCAACCAAGTGCTGGTTAATTACTTGAAAATCGCCGGCCAATACGCGGCGCAC 154057 |||||||| || ||||| || |||| ||||||||| || || | | || || | Sbjct 47 TAAATCTTTAATTAAGTGATGATTAACTACTTGAAATTCACCAGAAAGAACTCGTCTATT 106 Query 154058 ATACAAATTGCTGGTGAACGGCTCGAACGATTCGTTGTTGCCTAATATTTGAGCTGTAGT 154117 || | ||| || ||||||| || |||||||| || ||||| ||||| || |||| Sbjct 107 GTATATATTTGAAGTATACGGCTCAAAAGATTCGTTATTACCTAAAATTTGTGCAGTAGA 166 Query 154118 TGCTGTGGGCATATACGCCACCAACAAAGAGTTTCGCAAACCGTGTTTTGCAATGCGCAA 154177 ||| || |||||| || | ||| | || || || | || ||||| || || Sbjct 167 TGCGGTTGGCATAGGGGCAATCAATAGTGAATTCCGGACGCCATGTTTAGCGATTTTTTC 226 Query 154178 TTTTAAATCTGCCCAATTCCACAAGTTGGTAGGTTGCACGTTCCACATGTCGTATTGCAA 154237 |||||| || | ||||| |||||||| || ||| |||||||| || || ||||| Sbjct 227 TTTTAAGTCAGACCAATCCCACAAGTCCGTGGGTGTTTTATTCCACATATCATACTGCAA 286 Query 154238 AACACCCAAACTCGCCGG---ACTGTCACTATAACTAGAGTACGGCCCGTTCAGTTTT-- 154292 || ||| ||| | || || || |||| | || | || | | |||| Sbjct 287 AATACCTTTACTTACAGGCGAACCGT---TATAGGTTTCATATGAACCAT--ATTTTTCC 341 Query 154293 GCCAAGTCGCAACTGGCTTCTAACGCCGCATAGTATACGGTTTCGGCAATTTGTTTGTTT 154352 || || || ||||||||||| || || | ||||| | ||||| ||| |||| || Sbjct 342 GCTAACTCACAACTGGCTTCCAAAGCACCGTAGTAAATTGTTTCAAAAATCTGTTGATTC 401 Query 154353 AACATTTTGGCTTTGTCACTTTCGTACGGCAATCCCAATATACAAAAAGCATCGGCGAGC 154412 || | | | |||| | |||||| || || | | ||||| |||||| || || | Sbjct 402 AATAATCTAGCTTCTTTACTTTCATAAGGATAACGCAATAGGATAAAAGCGTCCGCCAAT 461 Query 154413 CCTTGAATGCCCACTCCAACGGGTCTGTGTTTTAAATTCGATTCTTTGGCAGCCTCCAGA 154472 ||||||| || | ||||| |||| || | ||||| |||| ||| |||||| || Sbjct 462 CCTTGAACTCCAATTCCAATTGGTCGATGCCTAAAATTAGATTTTTT---AGCCTCTGGA 518 Query 154473 ---GGATAATAATTGATATCGATAATTTTATTTANNNNNNNNNNNNNNNNNNNNNNNNNN 154529 || ||||| || | ||| ||||||||||| | Sbjct 519 AGTGGGTAATAGTTTACATCTATAATTTTATTCAAATTTCTTGTTATAATTTTGGAAACA 578 Query 154530 NNNNNNNATGCGACAAAATCAAACACTCCGCTTT-TAATA-AAACG-ATTTACACACACA 154586 || | | |||||||||| ||| || ||| | |||| ||||| | | | Sbjct 579 TTTTTCAATTCAATAAAATCAAACTTTCCATTTGGTAACACAAACATATTTAGAGCAATA 638 Query 154587 GACGCCAAGTTGCAAACGGCAATTTCTTCAGAACTACTGTATTGCACAATTTCTGCGCAC 154646 || ||||| ||||||||||||||||| || |||| | |||| ||||||||||| ||| Sbjct 639 GATGCCAAATTGCAAACGGCAATTTCATCTGAACAAGAATATTCCACAATTTCTGTACAC 698 Query 154647 AAATTACTGCATCGAATGGTGCCCAGGTTTTTCTGATTCGATTTGATGTTGCATGCGTCT 154706 ||||| ||||| ||||| || || || ||||| ||||| ||| |||||| | |||| Sbjct 699 AAATTGCTGCAACGAATTGTTCCAAGATTTTTTTGATTACTTTTACGGTTGCAAGTGTCT 758 Query 154707 TTGTACAAAATGTACGGGGTGCCCGTTTCCACTTGGGTTTCAATAATTGTGCGAAACAGA 154766 ||||||| || || || | || ||||| ||||| | ||||| || | ||| Sbjct 759 TTGTACATTATATATGGATTACCAGTTTCAACTTGAGCTTCAACTATACTAAACCACAAC 818 Query 154767 CTTCGCGCCTCAACTTGACAAGTAAATCGATTTTCGCTCTCATATTGTTCGTACAGTTTT 154826 ||| |||| |||| |||| | | |||| | ||||||| ||||||||| ||| Sbjct 819 GCTCGAGCCTTAACTATTTTAGTAGCCCTACCTTCGTTTTCATATTTTTCGTACAGATTT 878 Query 154827 TCAAACTCTAAACTGTACACGTCCGACAAACCGGGACAGCGGTCGGGACACATCAATGAC 154886 | || || || | || || ||||||| ||||| || |||||||| || ||| Sbjct 879 TTGAATTCATCACCCCAGACATCGAACAAACCCGGACACTTGTGTGGACACATTAAAGAC 938 Query 154887 CACATTTCGTTTTGTTGTACGCGTTTCATAAACAAATCCGGCACCCACAAAGCGTACAAC 154946 || | || | || || ||||| |||||| ||||| || | ||| || | || || Sbjct 939 CAATCACCATTATTTTCTAAGCGTTCCATAAATAAATCTGGAATCCATAACCCATAGAAG 998 Query 154947 AAATCACGCGCCTTTTTGTCTTCAGCGCCCATGTTTCGCTTTAAATTCAAAAAATCATAT 155006 | ||| | || | ||||| || | ||| || |||| ||||| ||| || Sbjct 999 AGATCTCTTGCACGAATTTCTTCTTTTCCGGTATTTTTTTTCAAATCTAAAAATTCAAAT 1058 Query 155007 ATGTCGGCGTGCCACGGCTCTAAATA 155032 || || || |||||||| |||||||| Sbjct 1059 ATATCTGCATGCCACGGTTCTAAATA 1084 >seq210017 Length=1697 Score = 174 bits (192), Expect = 2e-38 Identities = 718/1135 (63%), Gaps = 30/1135 (3%) Strand=Plus/Plus Query 154001 ATCTTCAACCAAGTGCTGGTTAATTACTTGAAAATCGCCGGCCAATACGCGGCGCACATA 154060 ||||| | ||| || || |||| | ||| || || || | || || ||||| ||| Sbjct 369 ATCTTTTAACAAATGATGATTAACAATTTGGAATTCACCAGATAAAACCCGGCGATTATA 428 Query 154061 CAAATTGCTGGTGAACGGCTCGAACGATTCGTTGTTGCCTAATATTTGAGCTGTAGTTGC 154120 | ||| ||| | || || || ||||| ||||| || || ||||| || || | ||| Sbjct 429 TATATTTGATGTGTATGGTTCAAATGATTCATTGTTACCCAAAATTTGTGCGGTTGATGC 488 Query 154121 TGTGGGCATATACGCCACCAACAAAGAGTTTCGCAAACCGTGTTTTGCAATGCGCAATTT 154180 ||| ||||| || | || || || ||||| | ||| |||| ||||| || Sbjct 489 TGTTGGCATTGGTGCAATTAATAACGAATTTCGAACACCATGTTGAGCAATTTTATCCTT 548 Query 154181 TAAATCTGCCCAATTCCACAAGTTGGTAGG--TTGCACGTTCCACATGTCGTATTGCAAA 154238 ||| || | ||||| ||| || || || || || | ||||||||||| ||||| ||| Sbjct 549 TAATTCAGACCAATCCCATAAATTTGTTGGGATTTTA--TTCCACATGTCATATTGTAAA 606 Query 154239 ACACCCAAACTCGCCGGACTGTCACTATAACTAGAGTACGGCCCG--TTCAGTTTTGCCA 154296 | |||| ||| | || | | ||| | || || || ||| || || | Sbjct 607 ATACCCTTACTTACAGGGGAGCCTTCATATGTTTCATAAGGACCCAATTC--TTGAGCTA 664 Query 154297 AGTCGCAACTGGCTTCTAACGCCGCATAGTATACGGTTTCGGCAATTTGTTTGTTTAACA 154356 | || ||||| |||||||| || ||||||| | ||||| |||||||| ||| || | Sbjct 665 ATTCACAACTAGCTTCTAAGGCGCCATAGTAAATAGTTTCAAAAATTTGTTGGTTCAATA 724 Query 154357 TTTTGGCTTTGTCACTTTCGTACGGCAATCCCAATATACAAAAAGCATCGGCGAGCCCTT 154416 ||| |||| | ||||| || || || | || || ||||||||| || || || | Sbjct 725 ATTTAGCTTCTTTGCTTTCATAAGGAAAACGCATTAGTATAAAAGCATCAGCAAGTCCCT 784 Query 154417 GAATGCCCACTCCAACGGGTCTGTGTTTTAAATTCGATTCTTTGGCAGCCTCCAGAGGAT 154476 | | || | ||||| ||||| || |||||| |||| ||| || | | ||||| Sbjct 785 GTACCCCAATTCCAATTGGTCTATGCCGTAAATTTGATTTTTTAGCTTCGGGGACAGGAT 844 Query 154477 AATAATTGATATCGATAATTTTATTTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 154536 ||||||| | ||| ||||||||||||| Sbjct 845 AATAATTTACATCTATAATTTTATTTAAATTTTTCGTTATAATTTTTGAAACATGTTTTA 904 Query 154537 ATGCGACAAAATCAAACACTCCGCTTTTA-----ATAA---AAC-GATTTACACACACAG 154587 || || ||||| | ||||| | || ||| ||| | | | || Sbjct 905 ATTTATTGAAGTCAAA------GGTTTTATCCTGAGAAACGAACATATTAAGAGCTATAG 958 Query 154588 ACGCCAAGTTGCAAACGGCAATTTCTTCAGAACTACTGTATTGCACAATTTCTGCGCACA 154647 ||||||| || || || |||||||| || | | || | ||||||||| | ||| | Sbjct 959 ACGCCAAATTACATACAGCAATTTCATCTGGCGAAGAATACTCCACAATTTCAGTGCATA 1018 Query 154648 AATTACTGCATCGAATGGTGCCCAGGTTTTTCTGATTCGATTTGATGTTGCATGCGTCTT 154707 |||||||||| ||||| || |||| |||| |||||| ||| | || || || |||| Sbjct 1019 AATTACTGCAACGAATTGTTCCCACATTTTGCTGATTGCTTTTTCTATTACAAGCATCTT 1078 Query 154708 TGTACAAAATGTACGGGGTGCCCGTTTCCACTTGGGTTTCAATAATTGTGCGAA--ACAG 154765 |||| | ||||| || || || || || || || | |||||||| ||| || | || Sbjct 1079 TGTATAGCATGTAAGGTGTTCCTGTCTCAACCTGTGACTCAATAAT--TGCAAACCAAAG 1136 Query 154766 ACTTCGCGCCTCAACTTGACAAGTAAATCGATTTTCGCTCTCATATTGTTCGTACAGTTT 154825 || | |||| | || | || || | || | ||||||| || | || Sbjct 1137 TGTTTGTGCCTTTATTTTTTTATTAGCTCTACCCTCTTTTTCATATTTAGTATATAATTC 1196 Query 154826 TTCAAACTCTAAACTGTACACGTCCGACAAACCGGGACAGCGGTCGGGACACATCAATGA 154885 ||| || || || | || || ||||| || || | || ||||| || || Sbjct 1197 TTCGAATTCCTCACCCCATACATCGTGTAAACCTGGGCACTTATGTGGGCACATTAAAGA 1256 Query 154886 CCACATTTCGTTTTGTTGTACGCGTTTCATAAACAAATCCGGCACCCACAAAGCGTACAA 154945 ||| |||| || || | ||||||||||||||| || | ||||||||| || || Sbjct 1257 CCATTCATCGTCGGATTCAACTCTTTTCATAAACAAATCTGGTATCCACAAAGCATAAAA 1316 Query 154946 CAAATCACGCGCCTTTTTGTCTTCAGCGCCCATGTTTCGCTTTAAATTCAAAAAATCATA 155005 || ||| | || | | || || || | || |||||| | ||||| ||| Sbjct 1317 CAGATCTCTGGCTCGTGTTTCCTCTTTTCCAGTATTCTTCTTTAAGTCTAAAAATTCAAG 1376 Query 155006 TATGTCGGCGTGCCACGGCTCTAAATATACGGCCATCGCGCCTTTGCGT---TTTCCTCC 155062 ||| || | ||||| || |||| ||||| || | || ||| | | ||||| || Sbjct 1377 TATATCAGAATGCCATGGTTCTAGATATATTGCAAAAGCTCCTGGCCTTTTATTTCCACC 1436 Query 155063 TTGATCCACGTGACGCACACAATTATTGTACACGCGCAACAATGGTTCCACGCCG 155117 ||| || |||| || || ||||||| | || | ||||| ||| | | |||| Sbjct 1437 TTGGTCAACGTATCGAGCAACATTATTGAAAACTCTCAACATAGGTACTAAGCCG 1491 >seq25052 Length=3952 Score = 107 bits (118), Expect = 2e-18 Identities = 110/144 (76%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 34440 AACCGGGCAAACGTCGTTGGCTTAAAATTAAAAAAGACTATCTATGTAACGGCGAAATGG 34499 ||||||| ||||| ||||| | |||||||||||||| ||| ||| | | || |||||| Sbjct 2530 AACCGGGAAAACGAGGTTGGTTAAAAATTAAAAAAGATTATTTATTTCAAGGACAAATGG 2589 Query 34500 CGGATTCGATTGATTTAGTCGTGCTGGGCGCTCAGATGGGTACTGGGAAAAAAGGAGGTC 34559 | ||||| ||||||||| | |||| ||| | | |||||||| |||||||| ||| Sbjct 2590 CTGATTCAGCTGATTTAGTTATATTGGGTGCTTGGTTTGGTACTGGTAAAAAAGGTGGTA 2649 Query 34560 AATTGTCGATATTTTTGATGGGAT 34583 || |||||||||||||||| Sbjct 2650 TGTTAAGTATATTTTTGATGGGAT 2673 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 498325006997480