Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_011588.1 Length=127615 Score E Sequences producing significant alignments: (Bits) Value seq210274 154 1e-32 >seq210274 Length=1834 Score = 154 bits (170), Expect = 1e-32 Identities = 284/411 (69%), Gaps = 4/411 (1%) Strand=Plus/Plus Query 1044 ATTCATATGGCGTGAAGGCTACAGTTTTGGATGCGAA-CAGATGCATTTGGATTTATTTC 1102 ||| | |||||||||||| || ||||||| ||| || || || ||||| ||| |||||| Sbjct 5 ATTTACATGGCGTGAAGGATATTGTTTTGG-TGCAAATCAAATACATTTAGATATATTTC 63 Query 1103 GAATCATCGTTATGCGATACCGCTTTAAAAGTTACAAATTGGACGATGTGAGTCGGGAGA 1162 | || || | ||| |||| || ||||||||||||| ||| | || || | | | Sbjct 64 GTATTATTATAATGAGATATCGTTTTAAAAGTTACACATTAAATGAAGTATCTAAAAATA 123 Query 1163 TTTTAAAAGACTCCAAAACAGGCGTTAGCGCTGTCAATTTACGATATACGTTTTTCCGAA 1222 | |||||||| || ||||| || |||| || || |||| ||||||| ||||| || Sbjct 124 TATTAAAAGATTCTAAAACTGGTGTTAATGCAATCGCTTTAAGATATACATTTTTTTCAA 183 Query 1223 TGATGAAGTA-CGGACGATATTTTAAAACGGATGAAAGTTCGGCCAAAATACCGTCGATC 1281 | || || | | | || |||| || ||||| || | || |||| || || Sbjct 184 TTATTAAACATCAAAAAATGTTTTCGCAC-AATGAATCATCCGAACAATTACCATCTATA 242 Query 1282 AAAGATACGCTAGAATATAATAACGCCGATACGCTATTAGTGTCGAAGCTCGAATCGCGT 1341 | ||| || | | |||||||| || ||||| ||||||| || || | ||| Sbjct 243 AGAGAAACATTGCATTATAATAATGCTGATACATTATTAGTATCAAAATTGGAAGAAAAA 302 Query 1342 ACGAAATGTATTCCGTTTATTATTAGTCGAGCAATGGACTGTCAAGTTCCTCTAACTTCT 1401 || |||| ||| |||||||| | | ||| | || |||||||| || || || || Sbjct 303 ACAAAATTAATTGATTTTATTATAAATTTAGCTAAAGAATGTCAAGTACCATTATCTGCT 362 Query 1402 ATGAATACGAATTATAATAAAATGCAATTTAAACTGTGGAGCGAATGTTTT 1452 |||| || |||||||||||||| |||| | | |||||| |||||||| Sbjct 363 ATGACAACTAATTATAATAAAATACAATATCGATTGTGGAATCAATGTTTT 413 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 407191799873912