Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq105373 176 4e-39 seq210017 158 1e-33 >seq105373 Length=2707 Score = 176 bits (194), Expect = 4e-39 Identities = 664/1037 (64%), Gaps = 15/1037 (1%) Strand=Plus/Minus Query 123303 GCGATCTATCTAGAACCGTGGCACGTTGATGTGTACGATTTTTTAAATTTAAAACGCAAC 123362 || || ||| ||||||||||||| | ||| | | || |||||| |||| ||| || Sbjct 1090 GCAATTTATTTAGAACCGTGGCATGCAGATATATTTGAATTTTTAGATTTGAAAAAAAAT 1031 Query 123363 ATGGGGGCGGAAGAAAAGAAAGCCCGCGATTTGTTGTACGCTTTATGGGTACCCGATTTG 123422 | || ||||||| || | ||| | || || | |||||| | || ||||| Sbjct 1030 ACCGGAAAAGAAGAAATTCGTGCAAGAGATCTCTTCTATGGGTTATGGATTCCAGATTTA 971 Query 123423 TTTATGCGACGCGTAAAAGACGACGGCGTGTGGTCGCTCATGTGTCCCGATCGGTGTCCC 123482 |||||| |||| || || | | || | ||||| | |||||||| | |||||| Sbjct 970 TTTATGGAACGCTTAGAAAATAATGGTGATTGGTCTTTAATGTGTCCACACAAGTGTCCG 911 Query 123483 GGCTTGAGCGACGTTTACGGCAATCAGTTTGACGAGTTGTACGCGCAATACGAGCGCGAA 123542 || ||| ||| || | || || | || | | |||||| |||| || |||| Sbjct 910 GGTTTGTTCGATGTCTGGGGTGATGAATTCAAAAATCTGTACGAAAAATATGAAAACGAA 851 Query 123543 GGCAAACAGGTTAGTCAG---GTTCCGGCACGTGATTTGTTCAAATTTATTATCG---AA 123596 || | || || | | ||| ||| || | |||| |||| ||| | || Sbjct 850 GGTAG---GGCTACTAAAATAGTTAAGGCTCGAGCGTTGTGG---TTTAGTATAGTTGAA 797 Query 123597 ACACAAGTCGAAACCGGAACGCCGTACATGCTCTACAAAGACGCCTGCAACAGGAAAACC 123656 | ||||| ||||| || | || || || | ||||||||| | |||||| | |||| Sbjct 796 GCTCAAGTTGAAACTGGTAATCCATATATAATGTACAAAGACACTTGCAACCGTAAAAGT 737 Query 123657 AATCAGAGCAACTTGGGAACAATAAAATGTAGTAATCTTTGCTCCGAAATTATCGAATAC 123716 ||||| | || | |||||||| || || ||| | || | |||||| | ||||| Sbjct 736 AATCAAAAAAATCTTGGAACAATTCGTTGCAGCAATTTGTGTACAGAAATTGTGGAATAT 677 Query 123717 AGCGATGCCGATCAAGTGGCCGTGTGTAATTTGGCTTCGATTTGCGTGAATCG--TTGCG 123774 | | ||| || | ||||| || |||||||| || ||| | ||| ||| | Sbjct 676 TCTTGTTCAGATGAAATTGCCGTTTGCAATTTGGCATCTATTGCTCTAAATATGTTTGTG 617 Query 123775 TCGA-AAACGGCGCTTTTAATTTCCAAACGCTCAAACGCATAACAAAAACTGTAGTAAAG 123833 | ||| || ||| |||| | ||| | | |||| | || || Sbjct 616 TTACCAAATGGAAAGTTTGATTTTATTGAATTGAAAAATGTTTCCAAAATTATAACAAGA 557 Query 123834 AATTTGAACAAAATTATCGATGTTAATTTTTATCCTTTGGAGGAAGCGCGTTTGTCTAAT 123893 |||||||| |||||||| ||||| || | ||| || | || || |||||| Sbjct 556 AATTTGAATAAAATTATAGATGTAAACTATTACCCACTTCCAGAGGCTAAAAAATCTAAT 497 Query 123894 TTGAAACACAGACCGGTCGGAGTGGGCATTCAAGGGTTGGCCGACGCGTTTGTAATGCTG 123953 || | || |||| | ||| | || ||||||| ||||| ||||| ||| | | || Sbjct 496 TTTAGGCATCGACCAATTGGAATTGGAGTTCAAGGATTGGCGGACGCTTTTATCCTATTG 437 Query 123954 CGCATGCCGTACGAAAGCGACGAAGCAAAGTTGCTTAATACGCAAATAGCCGAAACAATT 124013 || || || ||||| | ||||| | || | ||| || || ||||||||| Sbjct 436 CGTTATCCTTATGAAAGTAAAGAAGCTAGATTATTGAATCAACAGATTTTTGAAACAATT 377 Query 124014 TATTACGGCGCTTTGGAGGCGAGCTGCGAACTTGCGAAAATTCACGGCGCGTACGAAAGT 124073 || ||||| |||||||| || || || || | ||| ||| | || | || |||| Sbjct 376 TACTACGGTGCTTTGGAAGCCAGTTGTGAGTTAGCGGAAAAATATGGTTCATATGAAACC 317 Query 124074 TACGCGGGCAGCCCGGCGAGCCGAGGTATTTTGCAGTACGACATGTGGAATGCTACACCG 124133 || || || | || ||||||||||||||| || ||||||||| ||||| Sbjct 316 TATAACGGTTCGCCTGTAAGTAAAGGTATTTTGCAGTATGATATGTGGAATAAAACACCC 257 Query 124134 ACAAATTTGTGGGACTGGAGCGTTTTAAAACAACGCATATCGACGCACGGTTTGCGTAAC 124193 || | |||||||| ||| | |||||| || || | | || || | || || Sbjct 256 ACGGACTTGTGGGATTGGTCTGACTTAAAAGAAAAAATCGCTAAACATGGCGTCCGGAAT 197 Query 124194 TCGCTGTTGGTGGCGTACATGCCGACGGCAACCACTGCTCAAATTTTAGGAAACAACGAA 124253 || || ||| | || ||||| || ||| | ||||| ||||||||||| || |||||| Sbjct 196 TCACTATTGATTGCCCCTATGCCAACCGCATCTACTGCACAAATTTTAGGTAATAACGAA 137 Query 124254 TCCTTCGAGCCGTTCACTAACAATTTGTACGTGCGACGAGTGTTAGCCGGCGATTTTCAA 124313 || || ||||||| ||| ||| | ||| ||||||| | | || || |||||| Sbjct 136 TCTTTTGAGCCGTATACTTCAAATATATACAATAGACGAGTTCTTTCTGGTGAATTTCAA 77 Query 124314 GTGATAAATCATCATTT 124330 || | |||||||| || Sbjct 76 GTAGTTAATCATCACTT 60 >seq210017 Length=1697 Score = 158 bits (174), Expect = 1e-33 Identities = 712/1115 (64%), Gaps = 34/1115 (3%) Strand=Plus/Minus Query 123237 ATGCTGCGAGTTTACAATAACGCCGTGCGGCACGTCGACCAGGGCGGCAA---ACGCAAA 123293 ||| || |||||| |||||| | | || |||| ||||| || || || | | | Sbjct 1478 ATGTTGAGAGTTTTCAATAATGTTGCTCGATACGTTGACCAAGGTGGAAATAAAAGGCCA 1419 Query 123294 GGCGCGATGGCGATCTATCTAGAACCGTGGCACGTTGATGTGTACGATTTTTTAAATTTA 123353 || || | || || ||||||||||| ||||| |||| | || |||||| | ||| Sbjct 1418 GGAGCTTTTGCAATATATCTAGAACCATGGCATTCTGATATACTTGAATTTTTAGACTTA 1359 Query 123354 AAACGCAACATGGGGGCGGAAGAAAAGAAAGCCCGCGATTTGTTGTACGCTTTATGGGTA 123413 || || | || || |||| |||| | ||| |||| || ||||| ||| || Sbjct 1358 AAGAAGAATACTGGAAAAGAGGAAACACGAGCCAGAGATCTGTTTTATGCTTTGTGGATA 1299 Query 123414 CCCGATTTGTTTATGCGACGCGTAAAAGACGACGGCGTGTGGTCGCTCATGTGTCCCGAT 123473 || |||||||||||| | | || || ||||| | ||||| | ||||| || || Sbjct 1298 CCAGATTTGTTTATGAAAAGAGTTGAATCCGACGATGAATGGTCTTTAATGTGCCCACAT 1239 Query 123474 CGGTGTCCCGGCTTGAGCGACGTTTACGGCAATCAGTTTGACGAGTTGTACGCGCAATAC 123533 ||| || || || ||| || | || | | || || || || || | |||| Sbjct 1238 AAGTGCCCAGGTTTACACGATGTATGGGGTGAGGAATTCGAAGAATTATATACTAAATAT 1179 Query 123534 GA----GCGCGAAG-GCAAACAGGTTAGTCA-GGTTCCGGCACGT-GATTTGTTCAAATT 123586 || | | | || || || | | | | || | ||| | | |||| ||| Sbjct 1178 GAAAAAGAGGGTAGAGCTAATAAAAAAATAAAGGCACAAACACTTTGGTTTG--CAA--- 1124 Query 123587 TATTATCGAAACACAAGTCGAAACCGGAACGCCGTACATGCTCTACAAAGACGCCTGCAA 123646 |||| || |||| || || || ||||| || |||||||| |||||||| || || || Sbjct 1123 --TTATTGAGTCACAGGTTGAGACAGGAACACCTTACATGCTATACAAAGATGCTTGTAA 1066 Query 123647 CAGGAAAACCAATCAGAGCAACTTGGGAACAATAAAATGTAGTAATCTTTGCTCCGAAAT 123706 || |||| ||||||| || |||||||||| || |||||| | ||| | ||||| Sbjct 1065 TAGAAAAAGCAATCAGCAAAATGTGGGAACAATTCGTTGCAGTAATTTATGCACTGAAAT 1006 Query 123707 TATCGAATACAGCGATGCC-GATCAAGTGGCCGTGTGTAATTTGGCTTCGATTTGCGTGA 123765 | | || || | ||| ||| || | || || ||||||||||| || || | | Sbjct 1005 TGTGGAGTATT-CTTCGCCAGATGAAATTGCTGTATGTAATTTGGCGTCTATAGCTCTTA 947 Query 123766 A-----TCGTTGCGTC--GAAAACGGCGCTTTTAATTTCCAAACGCTCAAACGCATAACA 123818 | ||||| | || || || | ||| | ||| | | | |||| | || Sbjct 946 ATATGTTCGTTTC-TCAGGATAA---AACCTTTGACTTCAATAAATTAAAACATGTTTCA 891 Query 123819 AAAACTGTAGTAAAGAATTTGAACAAAATTATCGATGTTAATTTTTATCCTTTGGAGGAA 123878 |||| | || || ||||| || |||||||| ||||| |||| ||||||| | ||| Sbjct 890 AAAATTATAACGAAAAATTTAAATAAAATTATAGATGTAAATTATTATCCTGTCCCCGAA 831 Query 123879 GCGCGTTTGTCTAATTTGAAACACAGACCGGTCGGAGTGGGCATTCAAGGGTTGGCCGAC 123938 || || ||||| || ||||| | ||| | || | || || | || || Sbjct 830 GCTAAAAAATCAAATTTACGGCATAGACCAATTGGAATTGGGGTACAGGGACTTGCTGAT 771 Query 123939 GCGTTTGTAATGCTGCGCATGCCGTACGAAAGCGACGAAGCAAAGTTGCTTAATACGCAA 123998 || ||| || | |||| | || || |||||| | ||||| || || | || ||| Sbjct 770 GCTTTTATACTAATGCGTTTTCCTTATGAAAGCAAAGAAGCTAAATTATTGAACCAACAA 711 Query 123999 ATAGCCGAAACAATTTATTACGGCGCTTTGGAGGCGAGCTGCGAACTTG--CGAAAATTC 124056 || ||||| ||||| || ||||| || || || || || ||| | | | | |||| Sbjct 710 ATTTTTGAAACTATTTACTATGGCGCCTTAGAAGCTAGTTGTGAATTAGCTCAAGAATT- 652 Query 124057 ACGGCGCGTACGAAAGTTACGCGGGCAGCCCGGCGAGCCGAGGTATTTTGCAGTACGACA 124116 || | || |||| || | ||| ||| | || |||||||| || || |||| Sbjct 651 -GGGTCCTTATGAAACATATGAAGGCTCCCCTGTAAGTAAGGGTATTTTACAATATGACA 593 Query 124117 TGTGGAATGCTACACCGACAAATTTGTGGGACTGGAGCGTTTTAAAACAACGCATATCGA 124176 |||||||| | || |||||||| ||||| ||| | ||||| | || | Sbjct 592 TGTGGAATAAAATCCCAACAAATTTATGGGATTGGTCTGAATTAAAGGATAAAATTGCTC 533 Query 124177 CGCACGGTTTGCGTAACTCGCTGTTGGTGGCGTACATGCCGACGGCAACCACTGCTCAAA 124236 || ||| | || || ||| | || | || ||||| || ||| | || || |||| Sbjct 532 AACATGGTGTTCGAAATTCGTTATTAATTGCACCAATGCCAACAGCATCAACCGCACAAA 473 Query 124237 TTTTAGGAAACAACGAATCCTTCGAGCCGTTCACTAACAATTTGTACGTGCGACGAGTGT 124296 |||| || ||||| ||||| || || || | ||| ||| | || || || || | Sbjct 472 TTTTGGGTAACAATGAATCATTTGAACCATACACATCAAATATATATAATCGCCGGGTTT 413 Query 124297 TAGCCGGCGATTTTCAAGTGATAAATCATCATTTG 124331 || | || || || ||| | | |||||||||||| Sbjct 412 TATCTGGTGAATTCCAAATTGTTAATCATCATTTG 378 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450809250497320