Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_012740.1 Length=166418 Score E Sequences producing significant alignments: (Bits) Value seq211115 82.4 8e-11 >seq211115 Length=3236 Score = 82.4 bits (90), Expect = 8e-11 Identities = 165/242 (68%), Gaps = 2/242 (1%) Strand=Plus/Minus Query 140891 CGGAACACGGCTTAACTGTTCCATAACTTGATCAAAATGGTTTTTGTAAATGTGGCAATC 140950 |||| ||| |||| ||||| ||| ||||| |||||| ||||| ||||| || ||||| Sbjct 869 CGGAGAACGTGTTAATTGTTCTTTAATTTGATTAAAATGATTTTTATAAATATGACAATC 810 Query 140951 CCCACACTGATAAACCAGTTCGCCAACTTCTAATCCGCAAATCTTCGCGATGATATGCGT 141010 || | || || | |||||||| | ||| || || | || || | ||| || Sbjct 809 TCCTAAAGTATGGACAAAATCGCCAACATTTAAACCAACAACTTGGGCAATTAAATGGGT 750 Query 141011 TAACAGTGCATAGCTCGCTACGTTGAACGGATTCCCTAAAAAGAGATCATTCGAACGCAT 141070 ||| | ||||| || || | || || || |||||||| | ||| ||| | Sbjct 749 TAATAAAGCATAACTTGCGATATTAAAAGGGACTCCTAAAAAAACATCCGCACTACGT-T 691 Query 141071 GAAA-AATAAACAACTCAATTTGTTGTCGTTGGAAACATAAAACTGTACCATCGGATGAC 141129 || | ||| |||||| ||||| || || || |||||||||||||| | | | ||||| Sbjct 690 GATATAATTGACAACTTAATTTATTATCTTTTGAAACATAAAACTGAATTAAAGTATGAC 631 Query 141130 AT 141131 || Sbjct 630 AT 629 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531003260006960