Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_012753.1 Length=37184 Score E Sequences producing significant alignments: (Bits) Value seq111081 159 8e-35 >seq111081 Length=2465 Score = 159 bits (176), Expect = 8e-35 Identities = 184/248 (74%), Gaps = 0/248 (0%) Strand=Plus/Plus Query 3615 GCAGTCGCATCTTTTAGCCTTGCGGTTAACCGTAATTTTAAAGACGCTAACGGAGAACGT 3674 ||||| ||| | |||| ||| ||| | |||||||| |||| | || || ||| | ||| Sbjct 2218 GCAGTGGCAACCTTTACCCTAGCGTTAAACCGTAACTTTACGAATGCAAATGGAAATCGT 2277 Query 3675 GAAACAGACTTTATCAATTGCGTTATCTGGCGCCAGCAAGCTGAAAATTTGGCTAATTGG 3734 ||| |||| ||||| || || || || ||||| | | ||||||| ||||||||| Sbjct 2278 GAAGCAGATTTTATTAACTGTGTGATTTGGCGTAAACCTGCTGAAACAATGGCTAATTAT 2337 Query 3735 GCTAAAAAAGGCGCATTGATTGGAATTACTGGACGCATCCAGACACGTAGCTATGAAAAC 3794 || || |||||| ||||| | || | ||||| || ||||| || | | |||||| || Sbjct 2338 GCCAAGAAAGGCACATTGCTAGGTGTAACTGGTCGTATCCAAACGAGAAACTATGAGAAT 2397 Query 3795 CAACAGGGTCAACGAGTGTATGTAACAGAGGTTGTCGCTGAAAATTTTCAAATGCTAGAA 3854 ||||| |||||||| || ||||| || || ||||| || ||||| ||| || ||||| Sbjct 2398 CAACAAGGTCAACGTGTTTATGTGACTGAAATTGTCTGCGATAATTTCCAACTGTTAGAA 2457 Query 3855 AGTCGTGC 3862 |||||||| Sbjct 2458 AGTCGTGC 2465 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 118568915911284