Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_013598.1 Length=35525 Score E Sequences producing significant alignments: (Bits) Value seq205685 120 7e-23 >seq205685 Length=35797 Score = 120 bits (132), Expect = 7e-23 Identities = 390/593 (66%), Gaps = 12/593 (2%) Strand=Plus/Minus Query 604 AATCACGATTGGTTTATCT-GTGGTCTTCACGGCGCTAAACGAGCAGGAAAGACGATTGT 662 || || ||||||||||| || | || || || || || || |||| || |||| | Sbjct 21473 AAACAAGATTGGTTTATAACGTTG-CTGCATGGAGCGAAGCGGTCAGGTAAAACGAAAAT 21415 Query 663 TAACAATGATACATTCGTAACTGAGTTAAGCCGTGTCAGAAAGATTGCTGACTGTTTGGG 722 || ||||| ||| | |||||| | ||||| ||||| || || || || Sbjct 21414 AAATAATGACTTATTTCTGTTCGAGTTACGACGTGTTAGAAAAATAGCCGATGACGAAGG 21355 Query 723 TGTAGATGAGCCTATCTATATCCTAGCGGGGACATCGTCTACAGCGATTCAAAACAACAT 782 ||| | ||||| || || || |||| || || | | |||||||||| ||||| Sbjct 21354 CGTAAAAGAGCCGATGTACATATTAGCTGGTGTTTCCAGTTCGACGATTCAAAAGAACAT 21295 Query 783 ACTGCAAGAACTTTATAATAAATACGGATTTGAGCCCAAGTATGATAAGCATGGGTCTTT 842 | ||||||| || ||||||| ||| | || || |||||||| || || || ||| Sbjct 21294 ATTGCAAGAGCTATATAATATGTACAACATCGAACCTAAGTATGACAAACACGGAAATTT 21235 Query 843 CGTGTTTTGTGGTGTGAAAGTCGTACAAGTCTACACTGGATCTATCTCTGGTCTTAAACG 902 ||| | ||| ||||| || ||||||| ||| || ||| ||| || || | Sbjct 21234 TAAGTTGTTTGGCGTGAAGGTGGTACAAGCCTATACGGGAAATATTGGAGGCGTTGGAGC 21175 Query 903 TGCCCGCGGTTTTACAGCTTTCGGAGCTTACGTTAACGAGGCATCACTAG-CAAACGAG- 960 | | ||| | ||||||||||| ||||| || ||||| || || |||| ||| |||| Sbjct 21174 TATTAGAGGTATGACAGCTTTCGGTGCTTATGTAAACGAAGCGTCGCTAGCCAAGCGAGA 21115 Query 961 ATTGTTTTCAAGGAGATTATATCACGGTGCTCAGGTGAGGGGGCTCGTATAGTTTGGGAC 1020 | ||||| || || ||| |||| || || || || || || | ||| | | || Sbjct 21114 AGTGTTTGCA--GAAATTGTATCGCGTTGTTCTGGAACTGGTGCAAGGATATTAGGCGAT 21057 Query 1021 AGTAACCCAGACAACCCTAACCATTGGCTTAACCGAGACTATATTGGCAAGAACGACGGC 1080 | |||||||| ||||| | |||||| | || || || |||| || ||| | Sbjct 21056 ACAAACCCAGATAACCCAGAACATTGGTTAAAAAAGGAATACATTGATAA-TCCGA-GTA 20999 Query 1081 AAGATTATAGAT--TTTAGTTTCAAGCTCGATGATAATACGTTCTTATCAAAACGCTATA 1138 || || || || ||| ||| | | |||||||| || || || | |||| ||| Sbjct 20998 AAAATATTAAATCGTTTCATTTTGAATTAGATGATAACACATTTTTGGCTGAACGTTATC 20939 Query 1139 TTGAATCTATCAAAGCAGCTACGCCCAAG-GGTAAATTCTATGATAGAGACAT 1190 ||| || |||| |||||| |||||| || | || || ||| | ||||| Sbjct 20938 GAGAAAACATAAAAGAAGCTAC-CCCAAGCGGGATGTTTTACGATCGGGACAT 20887 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 113273437757598