Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_013646.1 Length=38764 Score E Sequences producing significant alignments: (Bits) Value seq205685 789 0.0 seq111081 82.4 2e-11 >seq205685 Length=35797 Score = 789 bits (874), Expect = 0.0 Identities = 913/1222 (75%), Gaps = 16/1222 (1%) Strand=Plus/Minus Query 17758 TAAGCTTGATGAATTGATGTCTATGATTAGTGGTGAATTAAATGAGTCTTAATGATGTTT 17817 ||| |||||||| || | | |||||| ||||||||||||| || | |||||| | Sbjct 21571 TAAACTTGATGAGTTACTTAACAAGATTAGCGGTGAATTAAATGGCACTAACTGATGTAT 21512 Query 17818 ATA---CTAATCGACAGATTGAAGTGTTAAAAGAAACTATCAATAAAGATTGGTTCATTA 17874 ||| | || ||||||||| || | | |||||| || || |||||||||| || | Sbjct 21511 ATAACGCAAA---ACAGATTGAGGTACTGACAGAAACAATAAAACAAGATTGGTTTATAA 21455 Query 17875 CTCTTTTACACGGAGCTAAGCGTTCTGGTAAAACGAAAATCAATAATGATTTATTTTTAT 17934 | | | || ||||| ||||| || |||||||||||||| |||||||| |||||| | | Sbjct 21454 CGTTGCTGCATGGAGCGAAGCGGTCAGGTAAAACGAAAATAAATAATGACTTATTTCTGT 21395 Query 17935 TTGAACTAAGACGTGTGCGTAAAATTGCAGATGAAGAAAACATAAAAGAACCAATGTATA 17994 | || || ||||||| | ||||| || ||||| ||| | ||||||| || ||||| | Sbjct 21394 TCGAGTTACGACGTGTTAGAAAAATAGCCGATGACGAAGGCGTAAAAGAGCCGATGTACA 21335 Query 17995 TATTGGCTGGTGTGTCTAGTTCAACTATTCAAAAGAATATACTTCAAGAGTTATACAATA 18054 |||| |||||||| || ||||| || ||||||||||| ||| | |||||| |||| |||| Sbjct 21334 TATTAGCTGGTGTTTCCAGTTCGACGATTCAAAAGAACATATTGCAAGAGCTATATAATA 21275 Query 18055 CGTATGATATTGAACCTAAATTTGATAAACATGGTAATTTTAAATTATTTGGTGTTAAAG 18114 ||| | || |||||||| | ||| ||||| || |||||||| || ||||| || || | Sbjct 21274 TGTACAACATCGAACCTAAGTATGACAAACACGGAAATTTTAAGTTGTTTGGCGTGAAGG 21215 Query 18115 TCGTACAGGCCTATACAGGTAATATCGGCGGCGTTGGTTCTATACGTGGTATGACAGCGT 18174 | ||||| |||||||| || ||||| || |||||||| |||| | ||||||||||| | Sbjct 21214 TGGTACAAGCCTATACGGGAAATATTGGAGGCGTTGGAGCTATTAGAGGTATGACAGCTT 21155 Query 18175 ATGGAGCTTATATTAATGAAGCTTCACTTGCTAAACAAGAGGTTTTTGCAGAAATAGTTT 18234 || |||||| | || ||||| || || || || | ||| || ||||||||||| || | Sbjct 21154 TCGGTGCTTATGTAAACGAAGCGTCGCTAGCCAAGCGAGAAGTGTTTGCAGAAATTGTAT 21095 Query 18235 CCCGTTGTTCAGCGACTGGTGCACGTATATTAGCTGATACAAATCCAGACAACCCCGAGC 18294 | |||||||| | ||||||||| | ||||||| |||||||| ||||| ||||| || | Sbjct 21094 CGCGTTGTTCTGGAACTGGTGCAAGGATATTAGGCGATACAAACCCAGATAACCCAGAAC 21035 Query 18295 ATTGGTTGAAAAAAGAATATATAGATAATTCAAGTAAAAGTATTCAATCATTTCATTTTG 18354 ||||||| ||||| ||||| || |||||| | ||||||| |||| |||| |||||||||| Sbjct 21034 ATTGGTTAAAAAAGGAATACATTGATAATCCGAGTAAAAATATTAAATCGTTTCATTTTG 20975 Query 18355 GTTTAGACGATAACACATTTTTAAGTGAAAGATATAGAACGAACATTAAAGCTAGC-ACA 18413 ||||| |||||||||||||| |||| | ||| || ||||| |||| ||| || Sbjct 20974 AATTAGATGATAACACATTTTTGGCTGAACGTTATCGAGAAAACATAAAAG-AAGCTACC 20916 Query 18414 CCTAGTGGAATGTTTTATGACCGAGATATAAAAGGTTTGTGGGTTTCTGCTGATGGGGTC 18473 || || || |||||||| || || || |||||||| ||||||| ||||| || || || Sbjct 20915 CCAAGCGGGATGTTTTACGATCGGGACATAAAAGGCCTGTGGGTATCTGCCGAAGGTGTG 20856 Query 18474 GTATATAAAGATTTTGATGCTAACAAACACTATATTGATTC---ATCAGATTTGCCACCA 18530 || ||| |||||||||| | | ||| ||| | | || |||| ||||| | Sbjct 20855 GTTTATCGAGATTTTGATTCAAGTGTACATTATGTGCAATCTGAATCA---TTGCCGAAA 20799 Query 18531 TTAGCAAAATATTATTGTGGAGTTGACTGGGGCTATGATCATTGGGGGTCAATTGTAGTT 18590 ||| ||| |||||||||||| ||||||||||| ||||| ||||||||||| || | ||| Sbjct 20798 TTATCAACATATTATTGTGGTGTTGACTGGGGATATGAACATTGGGGGTCTATAATCGTT 20739 Query 18591 ATAGGAGAAACAGAAGACGGAACTGCGTATTTAGTTGAAGAACACGCCTCTCAATATGAG 18650 || || |||||||| ||||| | |||||| | |||||||| ||||| || ||||| Sbjct 20738 ATCGGCGAAACAGATGACGGGGTATCATATTTAATAGAAGAACATGCCTCACAGTATGAA 20679 Query 18651 GAAATTGATTATTGGGTTGGTATTGCAAAAGAAATTCAAGCACGATATGGCGGGAGAATT 18710 ||||| ||||||||||| | | | || |||| || ||| | || || || || | Sbjct 20678 GAAATAGATTATTGGGTAGATGTAGCGAAAGGGATCCAATCCCGTTACGGGACTAGGGTG 20619 Query 18711 CCTTTCTATTGTGATTCGGCTCGTCCAGAACACGTATCTAGATTTGTAAGGGAAGGACTA 18770 ||||| | |||||| || | || |||||||| | ||||| | | ||||| || Sbjct 20618 CCTTTTTGGTGTGATAGCGCAAGACCTGAACACGTCGCCAGATTCCAACGAGAAGGCATA 20559 Query 18771 AATGC-CATCAATGCTTTTAAAGCTCGCTTATCTGGTGTCGAATCAGTAGCGAAGCGGTT 18829 ||||| ||| ||||| ||| || | |||||||| || ||||| || || || | || Sbjct 20558 AATGCTCAT-AATGCAGATAAGGCAAGATTATCTGGAGTTGAATCCGTGGCAAAACATTT 20500 Query 18830 CAAAACGAATAGATTATATATTTGTCGAGACAAAGTTAAAAAGTTTAGAGATGAGATTTA 18889 |||||| || | | | | ||| ||| |||||||||| ||||||||| ||| || || || Sbjct 20499 CAAAACAAACAAACTTTTTATCTGTAGAGACAAAGTAGAAAAGTTTAAAGACGAAATATA 20440 Query 18890 TCAATATATATGGAATaaaaaaaCTGGTGAGCCTATTAAAGAATTCGATGATGTTTTAGA 18949 || || ||||| | ||||| | || || ||||| |||||||| |||||||| | || Sbjct 20439 CCAGTACGTATGGGACAAAAAGAAAGGCGAACCTATCAAAGAATTTGATGATGTACTCGA 20380 Query 18950 TTCATTAAGGTACGCTATATAT 18971 ||| | || || || || ||| Sbjct 20379 TTCGCTTAGATATGCGATTTAT 20358 >seq111081 Length=2465 Score = 82.4 bits (90), Expect = 2e-11 Identities = 90/120 (75%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 9292 GATAATTATTTCAAAGCAGTCACTGATGCTGCCGAAGGTATTTTATACAAAAACGATGGT 9351 ||||||||||| ||||| || || ||||| |||||||| || |||||||| || || Sbjct 1125 GATAATTATTTTAAAGCGGTGACGGATGCCCTGGAAGGTATCTTGTACAAAAATGACGGG 1184 Query 9352 CAAATTGCTGTAATGGTTTGCCAAAAGTTGTACAGTATGCGACCACGAACAGAAATTGAA 9411 || || |||| | || | |||||||| ||||| | ||| |||||||||||||| Sbjct 1185 CAGATCGCTGCAGTGACTATGCAAAAGTTATACAGCTTAAACCCAAGAACAGAAATTGAA 1244 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 123612228438604