Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_013648.1 Length=39576 Score E Sequences producing significant alignments: (Bits) Value seq111081 104 6e-18 seq205685 100 7e-17 >seq111081 Length=2465 Score = 104 bits (114), Expect = 6e-18 Identities = 95/120 (79%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 10090 GATAATTATTTCAAAGCAGTCACAGATGCTGCTGAAGGCATTTTGTACAAAAATGACGGT 10149 ||||||||||| ||||| || || ||||| ||||| || ||||||||||||||||| Sbjct 1125 GATAATTATTTTAAAGCGGTGACGGATGCCCTGGAAGGTATCTTGTACAAAAATGACGGG 1184 Query 10150 CAAATAGCTGTGATGGTTTGCCAAAAGCTCTATAGCTTAAACCCACGAACAGAAATTGAA 10209 || || |||| || | |||||| | || |||||||||||| |||||||||||||| Sbjct 1185 CAGATCGCTGCAGTGACTATGCAAAAGTTATACAGCTTAAACCCAAGAACAGAAATTGAA 1244 Score = 95.1 bits (104), Expect = 3e-15 Identities = 100/132 (76%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 12632 AACATGAGAAAAAATTACAGATTGATTTACAAACAGTGTTTCATGGGTGAAGAATTGCAG 12691 || ||||||||| |||||||| | ||||||||||| | |||||||||||| |||| Sbjct 1256 AAAATGAGAAAAGATTACAGAATTATTTACAAACAAAAATATATGGGTGAAGAAATGCAA 1315 Query 12692 GACACAATTATGAAATACAACAAGACAATTGCTGAGATGGAGCAATCAGTAAATGACTTG 12751 || | | |||||||||| |||| | || |||||||||| | | |||| || || Sbjct 1316 GATAGTTATGTGAAATACAATGCGACAGTAGCGGAGATGGAGCGAGCTATAAACGATCTG 1375 Query 12752 TACAGCGATCCT 12763 || ||||||||| Sbjct 1376 TATAGCGATCCT 1387 >seq205685 Length=35797 Score = 100 bits (110), Expect = 7e-17 Identities = 72/81 (89%), Gaps = 3/81 (4%) Strand=Plus/Minus Query 23566 TTTTATTATGTCCAAGCGT-GATGACGTTAAAAGCTCCGGAAGTGCAAGCATTTATCCAC 23624 |||| |||||||||||| | |||||| ||||||||| |||||||||||||||||||||| Sbjct 17198 TTTTGTTATGTCCAAGCATTGATGACATTAAAAGCTATGGAAGTGCAAGCATTTATCCAC 17139 Query 23625 TTTAAAAGATATGG--AAGGA 23643 ||||||||||||| ||||| Sbjct 17138 GTTAAAAGATATGGGAAAGGA 17118 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 126204108041252